Oryzias melastigma (Indian medaka): 112136795
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Entry
112136795 CDS
T07439
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112136795 (ddx10)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112136795 (ddx10)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
Helicases
112136795 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DFRP_C
PAS_11
Motif
Other DBs
NCBI-GeneID:
112136795
NCBI-ProteinID:
XP_024114465
Ensembl:
ENSOMEG00000007443
UniProt:
A0A3B3D6X2
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All DBs
Position
LG4:complement(28260369..28266384)
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AA seq
828 aa
AA seq
DB search
MGKRPKSSGTKPASSESLTGIAVKNFEKWKKRYNKKKSRVKRERAQKKKPDWQVEREYIQ
NLVRKYEDVDSNQVVKFSDFPISKKTLLGLQESQFRQPTEIQRQTIGLALRGKDVLGAAK
TGSGKTLAFLIPVLECLYRQQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGL
VIGGKDLQTEAERIPRTNIVVCTPGRLLQHMDQTACFHASGLLMLVLDEADRILDMGFAD
TLNAIVENLPRTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKARFSTPASLEQSYVV
CELHQKVDLLFSFIRGHLTRKIIVFFSCCKQVQYLFRTFCRLRPGMPVLALHGRQQQVKR
VEVYNDFVRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGE
ALLLLLPSEEEAMVAQLQEKKVPINKIQVNPEKLQSVQQKLEAFLAQEKEQKERAQRCFV
SYLRSVHLMKNKAVFDVSKLNINQYALSLGLAVAPRVRFLHKTHVQEKKEEEEEEDEEEE
DLRSFKARLKGNSSPEENRDSDSENSEEDEEDGSEEDVQSEDEDEEDLRDLDLLTVKRKD
VFGLDPQSSDEADGVPKKRGMAKETKFKEAKKVLKRNFKVNTKVTFNEEGGAVQVWPPVQ
RKAAGEEEEEEKEEESGINVEKAKERLKREDEEFDKQEYSRKVKAKHRERRLKEREARRE
ASKRGRRQEDEEEDEVVAYLANQSDDEFDPSSLPDPDKLQPSEEEEEEEEEEDRGSAKHS
HRVEDDEEEELTPEKKIKMDEEEPPALDTGLTLAEDEELVLQLLRGQR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgaccgaagtcctccgggaccaaacccgcatcttcggagagcttgacaggg
atcgcggtcaagaacttcgagaaatggaagaaaaggtacaacaaaaagaaatctcgagtc
aaacgcgagcgtgcgcagaagaagaagccagactggcaggtggaacgcgagtatatccag
aacctggttcgcaagtatgaggacgtggactcgaaccaggtggtgaagttctctgacttt
cccatctccaaaaagactctcctgggcctgcaggagtcccagttccgacagcccaccgag
attcagaggcagaccattgggctcgccctgcggggcaaagacgtgctgggggcggccaag
accggctccggtaagacccttgccttcctcatcccggtgctggagtgcctgtaccggcag
cagtggagctccatggacggcctgggcgccctcatcatctcccccaccagggagctcgct
taccagaccttcgaggtcctccgtaaggtcggcaagaaccacgagttctctgcggggctg
gtcatcggtggtaaggacctgcagaccgaggcggagcggatccctcgcaccaacatcgta
gtctgcaccccgggccggctgctgcagcacatggaccagaccgcctgcttccacgccagc
gggctcctcatgctggttctggacgaggcggaccggatcctagatatgggcttcgcggac
acgctgaacgccatcgtggagaacctgccccggacccggcagacgctgctgttctctgcc
acgcagaccaagtccgtgaaagacctggcccggctcagcctcaaagacccagagtacgtc
tgggtccacgagaaggcccggttcagcacgcctgcctcgctggagcagagctacgtggtg
tgtgagctccaccagaaggtggacctgctcttctccttcatccgaggacacctgacccgg
aagatcatcgtcttcttctcctgctgcaaacaggtgcagtacctgttccggaccttctgc
cgccttcgacccggcatgccggttctggctctgcacggccggcagcaacaggtgaagcgg
gttgaggtctacaacgactttgtccggaagcagaacgccgtgctgttcgccactgacatc
gctgccagaggtctggacttccccgccgtcaactgggttctgcagtttgactgtccagag
gatgcagacacctacatccacagggtgggccgcacggcccgctacaaggagggcggggag
gcgctgctcctgctgctgccctctgaggaggaggccatggtggcgcagctgcaggagaaa
aaggtccccattaacaagatccaggtgaaccccgagaagctgcagagcgtccagcagaag
ctggaggccttcctggcacaggagaaggagcagaaggagcgggctcagcgctgttttgtc
tcctacctgcgctctgtccacctgatgaagaacaaagccgtgtttgacgtctccaaactc
aacatcaaccagtacgccctgtcgctggggcttgccgtggcgccacgggtacgctttctg
cataaaactcatgtacaagaaaagaaagaagaggaggaggaggaggatgaagaggaggag
gatctgcgcagcttcaaggcccgcctcaaaggaaactcttctccagaagagaaccgagac
tcagactcagagaacagtgaagaggatgaagaggatggaagtgaggaagatgtgcagtct
gaggatgaagacgaggaggacctccgagacctggaccttctgacggtcaaaagaaaagat
gtgttcggtctggacccgcagagctcagacgaagccgacggcgtcccgaagaagaggggt
atggccaaagagacaaagttcaaagaagccaaaaaggttctgaagaggaactttaaggtg
aacaccaaggtgaccttcaacgaggagggaggggccgtgcaggtgtggccaccggttcag
cgtaaggctgctggcgaggaggaggaagaggagaaagaggaggagtcgggaatcaatgtg
gagaaggccaaggagaggctgaagagggaggatgaggagtttgacaagcaggagtacagc
cgcaaggtgaaggccaagcacagggagaggaggctgaaggagagggaagcgcggcgcgag
gccagcaagcgtggaaggcgccaagaggacgaagaggaggacgaggttgtggcctacctg
gccaatcagagcgacgacgagtttgaccccagctctctgccggacccagacaagctgcag
ccttcagaagaggaggaggaggaagaggaggaggaggacaggggctctgccaaacattca
cacagggttgaagatgatgaagaggaggagctcacaccagagaagaagattaaaatggat
gaggaggagcccccagctctggacactggtctgactctggctgaggatgaggagctggtc
ctccagctgctgagaggacaaaggtag
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