Oryzias melastigma (Indian medaka): 112136876
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Entry
112136876 CDS
T07439
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
oml01006
]
112136876 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112136876 (chm)
Prenyltransferases [BR:
oml01006
]
Protein prenylation
Rab geranylgeranyltransferase
112136876 (chm)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112136876 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
112136876 (chm)
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Ortholog
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GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
Mitofilin
Nop14
Motif
Other DBs
NCBI-GeneID:
112136876
NCBI-ProteinID:
XP_024114607
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All DBs
Position
LG4:27338669..27349115
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AA seq
656 aa
AA seq
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MTQYCLFHGDRWACRLGGLWTRWTEKVFLNLNGLTESVVAAACSRVGQRVLHLDRRSYYA
ANWASFTFNALLTWIQEQQEGPQPEQVQDWSSLLEEGEELIHLSNPDLDSITNIQVVSYA
SEEEEEVPDTTKEETSADGPLEAESADSREEESAEAEEESAEKEAESAETEAESAEKEAE
SAEAEEESAEKEAESAEAEKEQATKLKGEEPEEDQSHPVSASGQSEPTRKKISYAQLVKE
GRRFNIDLVSKLLFSRGSLVDLLIRSNVSRYTEFKNVTRILTYRHGNLEQVPCSRADVFA
SRQLSVVEKRKLMRFLTSCMEETETEQAYSSHPYSKFLQDQQLGDNLQHFLLHSIAMVTE
DTPTEAGLAATRHFLRSLGRYGNSPFLFPVYGLGEIPQCFCRMSAVFGGIYCLRHSVSCL
IVDDNRCKAVIDSRGQRISCSHFVVEDGYLGSMRTVTTPTRLLSRAVLITDSSVLSSDSE
QQVSMVTIPPGEACQSAVKMVELCSSTMTCMPGTYLVHLTCQSVSSAFDDLSQLVTRMFN
TPESQEPGGRPAVLWSLYFNMVDGTVPRVEGQGLPSNVHVCSGPEGSLDHEQNIKQAELI
FQKIVPDEEFCPPAPNPEDIIYDGEGPTPSAEEQDSVKEAGLQEESGEDLSPQLEQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtactgcttgttccacggagaccgttgggcctgcagattggggggactgtgg
actcgctggactgagaaggttttcttgaatctgaacggtctgacggagtccgtggtggcg
gcggcctgctccagagtgggtcagagggttcttcacctggacaggaggagttattatgct
gctaactgggccagcttcaccttcaacgctctgctcacctggatccaggagcagcaggag
gggcctcagccagagcaagtacaggattggtcgagcctgctggaagaaggggaggagcta
atacacttgtcaaatccagaccttgactccatcactaacatacaggtggtctcctacgcc
agtgaggaagaggaggaagttccagacaccaccaaagaagaaacatctgcagatggccca
ttagaggcggagtctgcagattcaagggaggaggagtcagccgaggcagaggaggagtca
gccgagaaagaggcggaatccgccgagacagaggcggagtcagccgagaaagaggcggag
tccgccgaggcagaggaggagtcagccgagaaagaggcggagtcagccgaagcagagaag
gaacaggccaccaaattaaagggggaggagcctgaagaggaccagtcacatcctgtttcg
gcttctggccaatcagagccaaccaggaagaagatcagctacgcccagttggtgaaggaa
ggtcgcaggttcaacatcgacctggtctccaagctgctgttctctcgtggctcgttggtc
gacctgctcatcaggtccaacgtcagccgctacacggagttcaagaacgtcaccaggata
ctcacatatcgccatggcaacctggaacaggtaccctgcagtagagcggatgtctttgcg
agtcgtcagctgtctgtggttgaaaagaggaagctgatgcgttttctaacttcctgtatg
gaggagacggagacggagcaagcatacagcagtcatccatattcaaagttcctgcaggac
cagcagctgggggacaacctgcagcacttcttactccattctattgccatggtaacggaa
gacacacccacagaggcgggtctagctgctacacggcactttctgcgctccctgggtcgt
tatggcaacagtccatttttgttcccggtgtacggccttggagaaatcccccagtgtttc
tgcaggatgagtgcggtgtttggagggatctactgcctgaggcactcggtcagctgcctc
atcgtggacgacaacaggtgtaaggcagtgatcgacagtcgaggacagcgaatcagctgc
agccactttgtggtggaggacgggtatttaggcagcatgaggactgtgaccacgcccacc
aggctgctgagcagagccgtcttgataacggactcctcggttctgagcagcgactcagag
cagcaggtttccatggtgaccattcctcccggggaggcgtgccagtcggcggtgaagatg
gtggagctgtgctcgtctacaatgacctgcatgcccggaacatatttggtccacctcacc
tgtcagtcagttagctccgccttcgatgacctgtcccagctagtaaccaggatgttcaac
acgccggagtcacaggagccaggggggcgtccggccgtcctctggagtctgtatttcaac
atggttgatggaacggtgcctcgggtcgaaggtcagggactcccgtctaacgtgcacgtg
tgttctggtccagagggaagtctggatcatgaacagaacatcaaacaggctgagctcatc
ttccagaagattgttcccgatgaggagttctgtcctccagctccaaacccagaggacatc
atctatgatggagaaggccccaccccttcagctgaggagcaggactctgttaaggaggcg
gggctacaggaggagtcaggagaggatctgagtcctcagttggagcagtga
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