KEGG   Oryzias melastigma (Indian medaka): 112136886
Entry
112136886         CDS       T07439                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112136886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112136886
   03016 Transfer RNA biogenesis [BR:oml03016]
    112136886
   03012 Translation factors [BR:oml03012]
    112136886
   04131 Membrane trafficking [BR:oml04131]
    112136886
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112136886
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     112136886
Transfer RNA biogenesis [BR:oml03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    112136886
Translation factors [BR:oml03012]
 Eukaryotic type
  Elongation factors
   112136886
Membrane trafficking [BR:oml04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    112136886
Exosome [BR:oml04147]
 Exosomal proteins
  Proteins found in most exosomes
   112136886
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 112136886
NCBI-ProteinID: XP_024114637
Ensembl: ENSOMEG00000018209
LinkDB
Position
LG11:complement(13884793..13889680)
AA seq 462 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMSWFKGWKIERKEGGATGITLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPPNLTTEVKSVEMHHESLS
EALPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLAAENFTAQVIILNHPGQIAQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKTVEKKAPSGGKVTKSAQKADKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaaaacccatattaacattgtggtcattggccatgtcgattccggcaag
tccacaactaccggccacctgatctacaagtgcggagggattgacaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggtaaaggctccttcaagtacgcctgggtgttg
gacaaactgaaggctgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccagcaagtactatgtgaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggaacttctcaggctgactgtgctgtgctgatcgttgctgctggtgtt
ggagagtttgaagctggtatctccaagaacgggcagacccgtgagcacgcgctgctggcc
tacaccctgggtgtgaagcagctcatcgttggcgtcaacaagatggactccaccgagccc
ccttacagccagaagcgttttgaagagatcaccaaggaagtgagcgcctacatcaagaag
attggctacaaccctgccaccgtggcttttgtccccatctctggatggcacggagacaac
atgctggaggccagtgacaagatgagctggtttaagggctggaagattgagcgtaaggag
ggaggagctacaggtattacactcctggaagccttggactccattctgccgcccagtcgc
cccactgacaagcccctgcgtctgcctctgcaggacgtctacaaaattggcggtattgga
acagtccccgtcggccgtgttgagactggactcttgaagcccggcatggtcgtcaccttc
gctcctcccaacctgaccactgaggtcaagtcagtggagatgcaccacgagtctctttct
gaggctcttcccggtgacaacgtgggcttcaacgtcaagaacgtgtccgtcaaggaaatc
cgtcgtggaaacgtggccggcgacagcaagaacgacccaccactggcagctgagaacttc
accgctcaggtgatcatcctgaaccaccccggtcagatcgctcagggttacgctcccgtg
ctggactgccacactgctcacattgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttctggcaagaagctggaggacaaccccaaagccctgaagtctggcgacgctgcc
atcatcaccatggtgcctggaaaacccatgtgtgttgagagcttctcccagtatcctcct
ctgggccgcttcgctgtgcgtgacatgaggcagacggtggccgtcggggtcatcaagacc
gtggagaagaaggcgccctctggcgggaaggtcaccaaatctgcacagaaggctgacaag
aagaaatga

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