Oryzias melastigma (Indian medaka): 112136886
Help
Entry
112136886 CDS
T07439
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112136886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112136886
03016 Transfer RNA biogenesis [BR:
oml03016
]
112136886
03012 Translation factors [BR:
oml03012
]
112136886
04131 Membrane trafficking [BR:
oml04131
]
112136886
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112136886
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112136886
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112136886
Translation factors [BR:
oml03012
]
Eukaryotic type
Elongation factors
112136886
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112136886
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112136886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112136886
NCBI-ProteinID:
XP_024114637
Ensembl:
ENSOMEG00000018209
LinkDB
All DBs
Position
LG11:complement(13884793..13889680)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMSWFKGWKIERKEGGATGITLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPPNLTTEVKSVEMHHESLS
EALPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLAAENFTAQVIILNHPGQIAQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKTVEKKAPSGGKVTKSAQKADKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaaacccatattaacattgtggtcattggccatgtcgattccggcaag
tccacaactaccggccacctgatctacaagtgcggagggattgacaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggtaaaggctccttcaagtacgcctgggtgttg
gacaaactgaaggctgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccagcaagtactatgtgaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggaacttctcaggctgactgtgctgtgctgatcgttgctgctggtgtt
ggagagtttgaagctggtatctccaagaacgggcagacccgtgagcacgcgctgctggcc
tacaccctgggtgtgaagcagctcatcgttggcgtcaacaagatggactccaccgagccc
ccttacagccagaagcgttttgaagagatcaccaaggaagtgagcgcctacatcaagaag
attggctacaaccctgccaccgtggcttttgtccccatctctggatggcacggagacaac
atgctggaggccagtgacaagatgagctggtttaagggctggaagattgagcgtaaggag
ggaggagctacaggtattacactcctggaagccttggactccattctgccgcccagtcgc
cccactgacaagcccctgcgtctgcctctgcaggacgtctacaaaattggcggtattgga
acagtccccgtcggccgtgttgagactggactcttgaagcccggcatggtcgtcaccttc
gctcctcccaacctgaccactgaggtcaagtcagtggagatgcaccacgagtctctttct
gaggctcttcccggtgacaacgtgggcttcaacgtcaagaacgtgtccgtcaaggaaatc
cgtcgtggaaacgtggccggcgacagcaagaacgacccaccactggcagctgagaacttc
accgctcaggtgatcatcctgaaccaccccggtcagatcgctcagggttacgctcccgtg
ctggactgccacactgctcacattgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttctggcaagaagctggaggacaaccccaaagccctgaagtctggcgacgctgcc
atcatcaccatggtgcctggaaaacccatgtgtgttgagagcttctcccagtatcctcct
ctgggccgcttcgctgtgcgtgacatgaggcagacggtggccgtcggggtcatcaagacc
gtggagaagaaggcgccctctggcgggaaggtcaccaaatctgcacagaaggctgacaag
aagaaatga
DBGET
integrated database retrieval system