Oryzias melastigma (Indian medaka): 112136893
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Entry
112136893 CDS
T07439
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112136893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112136893
03016 Transfer RNA biogenesis [BR:
oml03016
]
112136893
03012 Translation factors [BR:
oml03012
]
112136893
04131 Membrane trafficking [BR:
oml04131
]
112136893
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112136893
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112136893
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112136893
Translation factors [BR:
oml03012
]
Eukaryotic type
Elongation factors
112136893
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112136893
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112136893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112136893
NCBI-ProteinID:
XP_024114651
Ensembl:
ENSOMEG00000018226
LinkDB
All DBs
Position
LG11:complement(13889825..13893243)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEIQKEVSTYIKK
IGYNPAAVAFVPISGWHGDNMLEASDKMNWFKGWKIERKDGNASGTTLLEALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLP
EAVPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKAADSFNAQVIILNHPGQINQGYAPV
LDCHTAHIACKFNELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVEPFSNYPP
LGRFAVRDMRQTVAVGVIKAVDTKEVSGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaaacccacattaacatcgtggtcattggccatgtcgactccggcaag
tccacctccaccggtcacctgatctacaagtgcggaggaatcgacaagagaaccatcgaa
aagttcgagaaggaagccgctgagatgggtaagggctccttcaagtacgcctgggtgttg
gacaaactgaaggctgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccagcaagtactatgtgaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggaacttctcaggctgactgtgctgtgctgatcgtcgctgctggtgtt
ggtgaatttgaagctggtatctccaagaacgggcagacccgtgagcacgccctgctggcc
ttcactcttggagtgaagcagctcatcgttggcgtcaacaagatggactccaccgagccc
ccttacagccaggcccgttttgaggaaatccaaaaggaagtgagcacctacatcaagaag
atcggctacaacccagctgctgttgcttttgtccccatctctggatggcacggagacaac
atgctggaggccagtgacaagatgaactggttcaagggctggaagattgagcgtaaggac
ggaaatgccagtggaaccactctcctggaagctcttgatgccattctgccaccatctcgc
cccaccgacaagcccctgcgtctgcccctgcaggacgtctacaaaattggcggtattgga
acagtccccgtcggtcgtgttgagactggagtcctgaagcccggcatggtcgtcactttt
gctcctcccaacctgaccactgaggtcaagtcagtggagatgcaccacgaatctctgccg
gaagctgtgcccggtgacaacgtgggcttcaacgtcaagaacgtgtccgtcaaggaaatc
cgcagaggatacgtcgctggtgacagcaaaaacgacccaccaaaggccgccgatagcttc
aatgctcaggtcatcatcctgaaccacccaggccagatcaaccagggttatgcccctgtg
ctggattgccacactgctcacattgcctgcaagttcaacgagctcattgagaagatcgac
cgtcgttctggcaagaagctggaagacaaccccaagtttgtcaagtctggagacgctgcc
attgtcaagctgatcccacagaagcccatggttgtggagcccttctccaactaccctcct
cttggacgttttgccgtgcgtgacatgaggcagaccgtggctgtcggagtcatcaaggcc
gtcgataccaaggaagtttctggcaagacaaccaaggctgcagagaaagcccagaagaag
aaatga
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