Oryzias melastigma (Indian medaka): 112136912
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Entry
112136912 CDS
T07439
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112136912 (farp2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_20
Motif
Other DBs
NCBI-GeneID:
112136912
NCBI-ProteinID:
XP_024114689
Ensembl:
ENSOMEG00000010390
LinkDB
All DBs
Position
LG4:28310300..28381762
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AA seq
1056 aa
AA seq
DB search
MGEIEGSYRVLQTPGTRLGAQFNAGISTLEPGQSLSGNMVSGSRGHGRGLQVRVQGLDDS
QEFFDIDPKALGQTLLSKVFIRGNLMESDYFGLEFQNMQMMWVWLEPTKPIAKQVRKPAN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLMEGRLICSENTGALLASHLVQSEIGD
YDDVADRDFLKANNLLPYQDKVQEIIMELHRRHLGQTPAESDFQILEIARKLEMYGVRFH
PASDREGTKINLAVAHMGLQVFQGHTKINTFNWSKIRKLSFKRKRFLIKLHPEVHGPHQD
ILEFLMSSRDQCKVFWKICVEYHSFFRLFDQPQPKSKAILFTRGSSFRYSGRTQKQLVEY
VRESGQKRTPYQRRNSKIGMSSRSFTTDVPKQHLSFNDSLRAAGSPLSTASPFHPAHTSS
VPPRAELQQKPQPLSPPSQTAAAPPPRLHSPLRAPRAPSPPKEDPVKAASPPHYSFQDTV
VESPQLSPFTSKEPLCMSPSFQMSTLSLPSQAPSPLQSPLLSEVGSNARLEEEEEGRRKR
YPTDKAYFIAKEILTTERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFH
RGFLKELDQRLALWEGRSNAHVKGDYQRIGDVMLKNMCALKEFTSFLQKHDEVLTELEKA
SKRLKKLEMVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCKHYSPAHRDFDDCK
KALKEVAEIATQLQSSLIRLENFQKLTELQRDLIGIENLTAPGREFIREGCLYKLTKKGL
QQRMFFLFSDMLLYTSKGVTATNQFKVHGQLPLQGMIVEESENEWSVPHCFTIYSAQRTI
VVAASSKVEMGKWIEDLNMAIDLAKKSQEKSRFFLDASLADRSNRSSDEVSLEQESEDDM
NSSHTSLDKQTHHRANTTMHVCWHRNTSVSMSDHSLAVENQLSGYLLRKFKNSNGWQKLW
VVFTNFCLFFYKTHQDDFPLASLPLLGYTVSTPEESDGIHKEYVFKLQFKSHVYFFRAES
EYTFERWMEVIKSAASTAGRMGLLIPKGGPAEVNGN
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaatagagggttcctatcgagttctgcagaccccaggtacgaggctgggagcc
cagtttaatgcagggatcagcaccctggagcccggccaaagtctcagcggtaacatggtc
agtgggagcaggggccatggtcgaggcctgcaggtccgtgtgcagggcctggatgattcc
caggagttctttgacatcgatccaaaagctcttggacagactctcctttcgaaggttttc
atcagaggtaacctcatggagagcgattactttggcctggagtttcagaacatgcagatg
atgtgggtttggctggaacccaccaagcccattgcaaaacaagtccgaaaaccggcaaac
acgctgttcagactgtccgtgaagttcttcccccctgaccccggccagctccaggaagag
tacaccaggtacctattctctctgcagatgaaaagagatctgatggagggccggctgatc
tgctctgaaaatacaggagcgctgctcgcttcccatctggttcagtcggagattggcgac
tatgatgatgtcgcagacagggacttcctgaaggcaaacaacctgctgccgtaccaagac
aaggtgcaagagataatcatggagctccaccgcaggcatttggggcagactcccgcagag
tcggactttcagatcctggagattgctcgtaaactggaaatgtacggcgttcgctttcac
ccagcctctgaccgcgagggcaccaagatcaatctggctgtggctcacatgggtcttcag
gtgttccagggacacacaaaaataaataccttcaactggtccaagattcgcaaactgagc
ttcaagcggaaacgctttctgatcaaactccacccagaggtccatggcccacatcaagat
attcttgaattcttgatgtccagtcgagatcagtgtaaggtcttttggaagatctgtgtg
gaataccactccttcttccgcttgtttgatcagccgcagcccaagtccaaagccatcctc
ttcaccagaggctcttcgttccgatacagtgggaggacccagaagcagcttgtggaatac
gtcagggaaagcggacagaagagaaccccctaccagaggaggaacagtaaaataggaatg
tcatctcgctcctttacaaccgatgtgccaaaacagcacttgtcattcaatgacagcctc
agggccgcaggctcccccctctccaccgcttcgcccttccacccggcccacacgtccagc
gtcccgcctcgagctgaactacaacaaaagccccagcctttgtcgcctccgagccaaact
gcagcagcgcctcctccgcggcttcactcccctctgcgagctcctagagcccccagccct
ccaaaggaagacccagtcaaggctgcttcccctccacactactcttttcaagatacagta
gtggaaagtcctcagctctcccccttcacctccaaggagcctctctgcatgtcgccctcc
ttccagatgtcgaccctcagcctgcccagccaggcgccgtcgcccctgcaaagcccctta
ctgagcgaggtgggcagcaatgccaggctagaggaggaggaggagggcaggaggaagcga
tatcccaccgacaaggcctacttcattgccaaagagattctgaccacggagagaacctac
ctgaaggacctggaggtcatcactgtgtggttccgcagcgccgtgatcaaagagaacgcc
atgcctgaaggcttgatgaccctcctcttctctaacatcgaccccatctacgagttccac
agaggcttcctgaaggagctggaccagaggctggctctctgggaggggcgttccaacgct
catgtcaagggagattaccagaggattggtgacgtgatgctgaagaacatgtgtgctctg
aaggagttcaccagcttcctccagaagcacgacgaggtgttgacagaactggagaaggcc
tccaagaggctgaagaagctggagatggtctacaaagagtttgagctgcagaaggtgtgc
tacctgcccctcaacaccttcctgctgaagcccatccagcgcctcatgcactacaagctc
atcctggagagactgtgcaagcattactcccccgctcaccgggactttgacgactgcaaa
aaagccttgaaggaggtggcagagattgccactcagcttcagagcagtctgatccggctg
gagaacttccagaagctcacggagctgcagagagacctgatagggattgagaacctgacg
gccccgggccgcgagttcatcagggagggatgcctgtacaagctcaccaagaagggcctg
cagcagagaatgtttttcctgttctcggacatgctcctttacacaagcaaaggcgtgacg
gcaaccaatcagttcaaagtgcacggacagctgcccctgcagggcatgatcgtggaggaa
agtgaaaacgagtggtcggttccacattgtttcaccatctactcagctcagaggaccatc
gtcgtagctgccagctctaaagtggagatggggaagtggatcgaggacctgaacatggct
attgacttggcgaagaagtctcaggagaaatccaggttcttcctggacgccagcctcgcc
gaccgctccaatcgatcatcagacgaggtctctctggagcaggagtcggaggatgacatg
aactcctctcacacttctctggacaagcagactcaccaccgtgccaacacaaccatgcat
gtgtgctggcaccgcaacaccagtgtgtcaatgtccgaccacagcctggctgtggagaac
cagctgtcggggtatctgctgaggaagttcaagaacagcaacggctggcagaagctttgg
gtcgtctttaccaacttctgcctcttcttctacaagactcaccaggacgacttcccgctg
gccagcctcccgctgctcggctacacggtcagcacccccgaggagtctgacggcatccac
aaggagtacgtcttcaagctgcagttcaagtcgcacgtttacttcttcagggcggagagc
gagtacacctttgagagatggatggaggtgatcaagagcgcggccagcaccgccggccgc
atgggcctcctcattcccaagggcgggcccgccgaggtcaacgggaactga
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