Oryzias melastigma (Indian medaka): 112136930
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Entry
112136930 CDS
T07439
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112136930 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_Teneurin
EGF_3
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
112136930
NCBI-ProteinID:
XP_024114724
Ensembl:
ENSOMEG00000004979
LinkDB
All DBs
Position
LG4:complement(3966154..4021299)
Genome browser
AA seq
2511 aa
AA seq
DB search
MEQKPAFSVGTSLLWAICFVPLCLALQCVDEKAPCVNNATCVTFGNGTEYCRCAAGFLGE
YCQHEDPCQPGLCLNRGTCSVSMPDGVPVPGSALCTCPLGYTGQRCQTPQNSTCYPNNPC
ANGGTCTLLSLDKYKCECTRGWTGPHCEHEDSCLSDPCANGGRCSSQSGGRYTCHCPPGY
KGPRCLIDRDECAETPSLCQNDGECFNTPGSYKCVCKAGFTGRLCESSYIPCSPSPCLNG
GTCHQTSETSYSCHCLPGETLQVTCCLRRPTCVDLSTVKHTICVWLSAGFNGTNCENNID
DCPEHQCANGGTCMDGVNTYNCQCPPEWTGQHCTEDVDECRLQPNTCQNGGTCHNGIGSY
NCVCVNGWSGVDCSENLNDCLEASCREGSTCIDRVASFICLCPRGKTGLLCHLTDACMSN
PCRDGSQCDTNPITGNFNCNCPPGYVGNTCNIDRNECSIGTNPCEHGGQCVNTDGSFTCN
CAKGYTGPRCEQDVNECASSPCQNDGTCLDRIGEYSCICMSGFTGSHCEIEVDECLSSPC
LNQGKCLDQVSHFVCECPAGFSGEVCQIDIDECSSTPCLNGAKCIDRPNGYDCECAEGFT
GLLCQENIDDCTPAPCHYGVCHDGIATFFCECESGYTGSICNIQVQECHSNPCQNQGRCI
DLVNAYQCNCQPGTSGSNCEINEDDCANSPCEHGECQDGINSYRCVCSPGYTGSKCDVEI
NECGSNPCMSGGTCMDQVNGFYCLCPPNTHGPLCLSGTDHCARQPCVHGDCVEQQLGYRC
ECEAGWVGAHCEQEKDECQPNPCQNGGNCLDRHNGYTCQCQPGFTGNNCEKNRDECASSP
CLNRGVCIDGVNSYTCRCSPPYTGKHCEVEQAPCASHPCKSGGVCLPSADYTSFTCRCPT
GWQGARCSEDVDECLSDPCRNDGLCENRRGSYICKCQRGYSGQNCQTDIDDCKPNPCLNG
GSCLDKVAGFSCKCRPGFEGERCETEVDECASNPCRNGATCHDYVNSFVCACREGFRGIQ
CEHNIPECTESSCLNNGTCVDGINSFSCRCPLGFLGLFCEYESNECDSQPCKNGGSCTDG
LRTYSCVCPVGYSGSNCQNYVNVCKGVHCLNGGTCSQSTTSWVCRCQAGWTGLYCDVPNM
SCQNFAARKGVDVENVCKNAGQCKNVGNSHQCICQPGYTGSYCEDPVDECLSNPCRNGAT
CKDYQGNYQCTCKPGFQGVNCEYDVDECHSRPCLNGGRCINLINRFTCSCPPGTHGVQCE
VNEDDCAPQPGSSEPRCLNGGQCVDGVGRYTCSCPPGFVGEHCEGDVNECRSAPCHGPGT
LDCVELVNDYRCLCRLGYTGRHCESMVNLCVSKPCRNGGVCSMNSSSVRGYTCSCPPGYT
GSTCAELQNHSCGGLRCLNGGSCLHHNGQPLCQCPPGFSGPLCENEQRCSVTCHNGGTCV
KDPANPFQHSCRCPPLFSGHFCEKRASLSPPTCPDPQCEHLSGDKVCDNQCNNHQCQWDG
GDCSLSCLQPWVNCTASVPCWDLFQNGRCDQECNNAACLFDSFECQQAPPSVCEYDKYCK
DHYGNGICDHSCYDEACGWDGLDCSDNITPELATGTLIIVVRLQPKELLDDLRGFLRSLG
GLLRTNVQVKRNDNNQPMVFPYYGVIDKHGQQAQASRRRREVEKEVIGSLVHLDIDNREC
SRTSSHCFSHAEKVASFIAAAHIKKSELPYPLVSVTSEVIEEPEPTYLMYLVGVGVAVVL
LILVLGMLAVKRKHKHGALWLPEGFIVSNDKRREPVGQDDFDMKNFKLQDGGLMDGGQSQ
RWHEDEAPPKKSRTEDKPLLPLALDGGVDQREWTLQHRKAADISHTPPQDDLDAGCLDVN
VKGPDGFTPLMVASLRNGGGLDCSVHAEEEEESGDEPGPSIISDLIAQGASLMAQTDRTG
ETALHLAARYARADAAKRLLDAGADPNAHDNMGRTPLHAAVAADAQGVFQILIRNRATEL
DARMNDGTTPLILAARLAVEGMVEELIHCHADINAVDDHGKSALHWAAAVNNVEATLVLL
KNGANRDMQDNKEETPLFLAAREGSFEAAQVLLDHYSNRDITDHMDRLPRDTAQERMHHD
IVRLLDQYNLVHSPHGGPNHMAAGGNSSVMCGANGGGYIGMRPGPQGKKSRRGGGGAKAA
GVGGGAKELKDMKAKRRKKPAGGEASSSGAGNGGGAGGGATNGVKTAGALPESSVTMSPV
DSLESPHSYTGDASTTVSTAATSPTVLSSPASRQMLPPVSHMLGQQPGWAGMSKHGYNSH
IFGLVSHQMGGGHPGMGGHHGQGAIMAPMNVTMSREQLPPIVTFQMMPPGAGQPLLKQSH
GQNQNHGQQGPGPMHCGAGLVYQMSDQMGVAHGMPHPLQHHHGVGHGGMDGQARPLPSYP
TMQSPVDKYPTPPSQHSYTTAGSEGTTPGQSAHPPSEHPYLTPSPDSPEAWSSSSPHSNS
DWSDVTTSPTPLGNAHHALAPAHHTHIPEQRQAQAQPGAQPPQMGNMQVFA
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaacccgctttctccgtgggaacatctcttctgtgggcgatctgcttcgtc
ccgctgtgtctcgcgctgcaatgtgtggatgaaaaggcgccctgcgtgaacaacgccaca
tgtgtgacctttggcaacggcaccgaatactgcaggtgtgctgccggctttctgggcgag
tactgtcaacacgaggacccgtgtcagccgggcctttgtctgaaccggggcacctgctcc
gtgtccatgcccgatggggtacccgtaccaggcagcgccctgtgcacctgccctctgggg
tacaccggccaacgctgccagacgccccagaactccacgtgttaccccaacaacccctgt
gccaacggaggcacctgcactctgctgtcgctggacaaatacaagtgtgaatgcaccagg
ggatggacaggtccacattgtgaacacgaggacagctgtctgtccgatccctgcgccaac
ggggggcggtgcagctcccagtccggcggcagatacacctgtcactgtccacctgggtac
aaaggcccccgctgcctcatcgaccgtgacgagtgtgcagaaacaccctccctctgtcag
aacgacggcgagtgtttcaacactcccggctcctacaagtgcgtctgtaaagccggattc
acaggccgactctgcgaaagctcctacatcccgtgctcgccgtccccgtgtctgaacggg
ggcacctgccaccagacctccgaaaccagctactcctgccactgcctcccaggtgagacg
ctgcaggttacctgctgcctcagacgtcccacctgtgtggacctctctactgtcaaacac
acaatctgtgtctggctgtcggcaggtttcaatggaaccaactgtgagaacaacatcgac
gactgccccgaacatcagtgcgccaacggaggaacctgcatggacggagtcaacacctac
aactgtcagtgtcccccagaatggaccggtcagcactgcacggaggacgtggacgagtgc
cggctgcagcccaacacctgccagaacgggggcacctgccacaacggcatcggcagctac
aactgcgtgtgcgtgaacggctggagcggcgtggactgctccgagaacctgaacgactgc
ctggaggcgtcctgccgcgagggctccacctgcatcgaccgcgtggcgtccttcatctgc
ctgtgtccccgcgggaagacagggctgctctgccacctcacagacgcctgcatgagtaac
ccgtgccgagacggctcgcagtgcgacaccaaccccatcaccggcaacttcaactgcaac
tgcccgccggggtacgtgggcaacacctgcaacatcgaccggaacgagtgcagcatcggt
accaacccgtgtgagcacggcggccagtgcgtcaacacggacggctccttcacctgcaac
tgcgccaagggctacaccgggcctcgctgcgaacaagacgtcaacgagtgcgcctccagc
ccctgtcagaacgacggcacctgcctggaccgcatcggggagtacagctgcatctgcatg
agcggcttcacgggaagtcactgtgagatcgaggtggacgagtgcctcagctcgccgtgt
ctgaaccaggggaaatgtctggaccaggtcagccacttcgtctgcgagtgtcccgcaggc
ttcagcggcgaggtgtgccaaatcgacatcgatgagtgctccagcacgccgtgcttgaac
ggcgccaagtgcatcgacagacccaacggatacgactgtgaatgcgctgaaggcttcacc
ggcctgctgtgccaggagaacatcgatgactgcaccccggcgccgtgtcactatggcgtg
tgccatgacgggatcgccaccttcttctgcgagtgcgaatcgggatacacgggatccatc
tgcaacatccaggtgcaggagtgccacagcaacccctgtcagaaccagggacgctgcatc
gacctggtcaacgcctaccagtgcaactgtcagcccggaacctcaggttcgaactgtgag
atcaacgaggacgactgcgccaacagcccctgtgagcacggggagtgccaggacggcatc
aacagttaccgctgcgtctgctcacctggatacacagggtccaagtgtgatgtggagatc
aacgagtgcggctccaacccgtgcatgagcggaggaacctgcatggaccaggtcaacggc
ttctactgtctgtgcccgcccaacacccacggcccgctgtgcctgtccgggacggaccac
tgcgcccgccagccctgcgtgcacggagactgcgtggagcagcagctggggtaccgctgc
gagtgcgaggcggggtgggtgggcgctcactgcgagcaggagaaggacgagtgtcagccc
aatccgtgccagaacggcgggaactgtcttgaccggcacaacggctacacctgccagtgc
cagccgggcttcacaggtaacaactgtgagaagaacagagacgagtgcgcttcctccccc
tgcctgaaccgcggcgtctgcatcgacggggtcaacagctacacctgccgctgcagcccc
ccctacaccggtaaacactgcgaggtggagcaggctccctgtgcctctcacccctgcaag
agcggcggagtctgcctgccgtctgcagactacacctccttcacctgtcggtgcccgacc
ggctggcaaggcgctcgctgcagcgaggacgtggacgagtgcctcagcgacccctgcaga
aacgacgggctgtgcgagaaccggaggggcagctacatctgcaaatgccagcgcgggtac
agcgggcagaactgccagacggacatcgacgactgcaaacccaacccctgcctgaacgga
ggctcctgtctggacaaagtcgcgggtttctcctgcaaatgtcgtccgggatttgaaggc
gagcgctgtgagacggaggtggacgagtgcgccagcaacccctgcaggaacggcgccacc
tgccacgactacgtcaacagcttcgtgtgcgcgtgccgcgagggcttcagggggattcag
tgtgagcacaacatcccagaatgcaccgagagctcgtgcctcaacaacgggacgtgcgtc
gatggcatcaacagcttctcctgccgctgtccgctgggctttctcgggctcttctgtgag
tacgagagtaacgagtgcgactcccagccctgtaaaaacggcggcagctgcaccgacggg
cttcgcacctacagctgcgtctgtccggtgggatacagcggctccaactgccagaactat
gtgaacgtctgcaagggggtgcactgtctcaacggcggcacctgctcccagtccaccacc
tcctgggtgtgccgctgtcaggcgggatggaccgggctgtactgcgacgtcccaaacatg
tcctgccagaactttgctgccagaaaaggtgtggacgtggagaatgtgtgtaagaacgcc
gggcagtgcaagaatgtggggaactcccatcagtgcatctgccagccggggtacacgggc
agctactgcgaggacccggtggacgagtgtctgtccaacccctgccgcaacggggccacc
tgcaaggattatcagggcaactaccagtgcacgtgcaaaccgggcttccagggcgtgaac
tgcgagtacgacgtggacgagtgccactccaggccctgcctgaacggaggacgatgcatc
aacctgatcaaccgcttcacctgctcctgcccacctggaacgcacggcgtgcagtgcgag
gtcaacgaggacgactgcgccccccagcccggctcgtcggagccgcgctgcctgaacggg
ggccagtgcgtggacggcgtgggccgctacacctgctcctgccctccggggttcgtcggg
gaacactgcgagggcgatgtgaacgagtgccgctcggcgccctgccacggccccggtacc
ctggactgtgtggagctggtcaacgactacaggtgtctctgtcgcctgggttacacaggt
cgtcattgtgagtccatggtgaacctgtgcgtgtccaaaccgtgtcgtaacgggggggtc
tgctccatgaacagcagctccgtgcgaggatacacctgctcctgtccgcccggttacacc
ggatccacgtgtgccgagctgcagaaccacagctgcggggggctgcgctgcctgaacggc
ggcagctgcctgcaccacaacggccagccgctgtgccagtgcccgccgggcttcagcgga
cctctctgcgagaacgagcagaggtgctcggtgacctgccacaacggaggcacctgcgtg
aaggacccggccaaccccttccagcacagctgccgctgcccgccgctcttctctggacac
ttctgcgagaagagggcgtcgctgagcccgcccacctgccccgacccccagtgcgagcat
ttgtcgggtgacaaagtgtgcgacaaccagtgcaacaaccaccagtgccagtgggacggc
ggcgactgctcgctcagctgcctgcagccgtgggtcaactgcaccgccagcgtgccgtgc
tgggacctcttccagaacggcagatgcgatcaggagtgcaacaacgcggcgtgcctgttc
gacagcttcgaatgccagcaggccccgcccagcgtctgcgagtacgacaaatactgtaaa
gaccactacgggaacggcatctgcgaccacagctgctacgacgaggcgtgcggctgggac
ggcctggactgctccgacaacatcacccccgagctcgccacggggacgctcatcatcgtg
gtgcggctgcagcccaaggagctgctggatgacctgcggggcttcctgcggtcgctcggc
ggcctgctgcgcaccaacgtgcaggtgaagcgcaacgacaacaaccagcccatggtgttc
ccgtactacggcgtgatcgacaagcacggccagcaggcgcaggcgagccggaggaggcgc
gaggtggagaaggaggtcatcgggtctctggtccacctggacatcgataaccgcgagtgt
tctcggacctcctcgcactgcttctcccacgccgagaaggtggcgtccttcatcgcagcc
gcgcacatcaagaagtccgagctgccgtacccgctggtgtccgtgaccagtgaggtgata
gaggagccggagcccacctacctgatgtacctggtgggggtgggggtggcggtggttctg
ctcatcctggtgctggggatgctggccgtcaaacggaagcacaaacacggcgccctgtgg
ctccccgaagggttcatcgtctccaacgacaagaggagggagcctgtgggacaggacgac
ttcgacatgaagaactttaagttgcaggacggcggtctgatggacggaggtcaaagtcag
agatggcatgaagacgaagctccgcccaaaaagagcagaacggaggacaaacctctgctg
cccctcgctctggacggcggcgtggaccagagggagtggaccctgcagcatcgcaaagcg
gccgacattagccacaccccccctcaggacgacctggacgcgggctgtctggatgtcaac
gtcaaaggacctgacggcttcacccccctgatggtcgcctccctgcggaacggcgggggc
ctggactgcagcgtgcacgccgaggaggaggaggagagcggcgacgagccggggcccagc
atcatctcggacctgatcgctcagggggcgtcgctgatggctcagacggaccgcaccggg
gagactgccctgcacctggccgcccgctacgcccgcgccgacgccgccaagaggctgctg
gacgccggagctgaccccaacgctcacgacaacatgggcaggacgccactgcacgccgcg
gtggccgctgatgctcagggggtgttccagattctcatccggaatcgagccacggagctg
gacgcccgcatgaacgacggcaccacgccgctcatcctggcggcccggttagctgtggag
ggaatggtggaggagctcatccactgccacgccgacatcaacgctgtggacgaccacggg
aagtcggcgctgcactgggctgctgccgtcaacaacgtggaggccacgctggtgctgctg
aagaacggcgccaaccgcgacatgcaggacaacaaggaggagacgccgttgttcctcgcc
gcccgggagggcagctttgaggcggcgcaggttctgctggaccactactccaatcgggac
atcacggaccacatggatcgcctcccccgcgacaccgcgcaggagcgcatgcatcacgac
atcgtgcgcctgctggaccagtacaacctggtgcacagccctcacggcgggcccaaccac
atggcggcggggggaaactcctcggtgatgtgtggggccaatggagggggctacatcggc
atgcgccctggaccccagggcaagaagagccggaggggtggaggtggggccaaggcggca
ggcgtggggggaggggccaaggagctgaaggacatgaaggcgaagagaagaaagaagccg
gcggggggggaggcttccagctcgggggccggaaatgggggaggagctgggggaggggcc
acgaacggcgtgaagacggcgggggcgctcccggagagctccgtcaccatgtcgcccgtg
gactcgctggagtcgccgcactcctacacgggggacgcctccaccaccgtctccactgcc
gccacctcgcccaccgtgctgagcagccccgcctcccggcagatgctgccccccgtcagc
cacatgctggggcagcagcccggctgggcgggcatgagcaagcacggctacaacagccac
atctttggcctggtctcgcaccagatgggggggggccacccaggcatgggggggcaccac
ggccagggcgccatcatggcacccatgaacgtcaccatgagccgggagcagcttcccccc
atcgtcacattccagatgatgccccccggggcgggccagcccctcctgaagcagtcccac
ggacagaaccagaaccacggccagcagggaccgggccccatgcactgcggcgccggcctc
gtgtaccagatgtccgaccaaatgggcgtggctcacgggatgccccaccccctgcagcac
caccacggcgttggccacggcggcatggacggtcaggcccgtcccctgccctcctacccc
accatgcagagccccgtggataagtaccccaccccgccctcgcagcacagctacaccacc
gcggggtcagagggcaccaccccgggacagtcggcccacccgcccagcgagcacccatac
ctcaccccctcccccgactcccccgaagcctggtcctcctcgtccccgcactccaactcg
gactggtctgacgtcaccaccagccccaccccgctgggaaacgcccaccacgcgctggcg
cccgcccaccacacgcacattcccgagcagaggcaggcgcaggcgcagccgggcgcgcag
ccgccgcagatggggaacatgcaggtgtttgcgtag
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integrated database retrieval system
