Oryzias melastigma (Indian medaka): 112136962
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Entry
112136962 CDS
T07439
Name
(RefSeq) zinc finger protein GLIS1 isoform X1
KO
K09232
zinc finger protein GLIS1/3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112136962
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112136962
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
112136962
NCBI-ProteinID:
XP_024114798
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All DBs
Position
LG4:4378258..4467240
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AA seq
939 aa
AA seq
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MQNPSSVVGMVSHCQTPTFPDFAGLALSVTEMCSRRAGSGAFGSQLCRSPPPHVSGASPK
RRALSEDQAQVAGKSARLSLPPGHVNGFYCSERDADAEAGDAEGSLMRGGPSLALLLGGQ
SDGLYPHGLHCSRPAADLLLQDGPQDARGCSAFHGASAGASPSLACSAAVYPIKQENSAG
YKISGVHGQSQTGFLACRANQGSEASRDGTVDATRAASSSRVCAVRSLGGGVSGDAAQAF
NNEDGSSPLALSPADSHHSARPLSAGDVKRRCLLLASHSSTAAASPSDADHLNLAAILCS
SQMSMVAGVCGFQANVSPSHASSTGFSSSSSSSSTSPPSACPQGASQRPPPRRSPQQAML
QESCQLSSPATCLLSLSSSSSSSSESLVEPERRGAGLCEERGAVPRGRRAGGVGGARGSD
GLGLLLTGTVMSGEVGAVLDGGALKQEPLDDFSPSEDELFQHHFHRHHHGASGHFRHTPR
PSMPPPYHLHQYPGAGPGGPLHPQSQPTAPASSLGLKATVGGRQAPHAAAEWDEAEGGAP
AEKQVCRWIDCSAAYEQQEELVRHIEKVHIDQRKGEDFTCFWAGCIRRYKPFNARYKLLI
HMRVHSGEKPNKCMFEGCNKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAK
HQRTHLDTKPYACQISGCTKRYTDPSSLRKHVKIHSAKEQQVHRKLRPCPHLEQDVLSDC
LSMQQLQSSAPSQPPPALTADIYAGLYADSNTPHHAASGELLPPNPASVPDLTPRQHRLD
QDLGSPHHLSPLTAMDGARDGMSGPLLPPGLKADPPLEKQHSHLHHKPYPQYHHHHHQSA
GEEYQGNFQSCFHFGDSYRMEQAVDGVHAPGDSHLYSSHQHNGFHMPAGGPGSAGFGLVP
ELQGGAACPFPPTAEENLFFQGGSFDRSLSHMASVYTET
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccctcatcggtggtcgggatggtcagccactgtcagaccccgaccttcccg
gacttcgcgggcttggcgctctccgtgacggagatgtgcagccgccgcgcgggaagcggc
gccttcggatcccagctgtgccggagcccgccgccgcacgtgagcggcgccagcccgaag
aggcgcgcgctgtccgaggaccaggcgcaagtggcgggcaagagcgcgcgcctgagcctg
cctccgggtcacgtgaacgggttctactgctcagagagggatgcagacgcagaggcgggg
gatgctgagggcagcctgatgcgcggcgggccgagcctggcgctgctgctggggggtcag
tctgatgggctttaccctcacggcctccactgcagcagacctgcagctgacctcctcctg
caggacggccctcaggatgccagaggctgctctgccttccacggggcctcggcgggggcc
tcgccaagcctggcctgctccgccgccgtttaccccatcaagcaggagaactcagctggc
tacaagatctctggcgtccacggccaatcgcagaccggctttctggcctgccgggccaac
caggggtcggaggcgtccagagacgggacggtcgatgccacgcgcgccgccagcagcagc
cgagtgtgcgcagtgcggtctctgggcggtggcgtgtcaggagacgcagcacaagcgttt
aataatgaagatggctcctccccgctggctttgtccccggcggactcccatcattcagcg
cggccgctcagcgctggcgacgtgaagaggcgctgcctgctgctggcctctcactcctcc
accgccgccgcttccccgtcagacgccgaccacctcaacctcgccgccatcctctgctcc
tcccagatgtccatggtcgccggcgtctgcgggttccaagccaacgtctcgccaagccac
gccagcagcaccggcttctcctcctcctcctcttcctcctccacgtccccaccctctgcg
tgcccacagggagcctcccaaaggcccccaccgcggaggagcccccagcaggccatgctg
caggagagctgccagctgtcctcacctgccacctgcctgctgtccctctcctcctcctca
tcctcctcttcagagtcattggtggagccggagcggcggggcgcagggctttgtgaggag
cggggcgccgttccgcggggccgacgggccgggggagtgggaggagcgaggggctccgac
gggctggggctgctgctgaccgggaccgtcatgtccggggaggtcggggcggttctggat
gggggcgcactgaagcaggagcccctggacgacttctcccccagcgaagacgagcttttc
cagcaccacttccaccgccaccatcatggcgccagtggacactttcgtcacacgcctcgc
cccagcatgccccctccctatcacttacaccagtaccccggagccggccccggggggcca
ctgcacccccagagccagcccacagcgcccgcctcctccctgggactcaaagcgaccgtc
gggggccgccaggcgcctcacgccgctgcagagtgggacgaagcggagggaggagcgccg
gcggagaagcaggtgtgccgctggatcgactgcagcgcggcgtacgagcagcaggaggag
ctagtgaggcacatcgagaaagtccacatcgaccagcgcaaaggggaggacttcacctgc
ttctgggccggctgcatccgccgctacaagcccttcaacgcccgctacaagctgctcatc
cacatgcgggtccactctggagagaagcccaacaagtgcatgtttgagggctgcaacaaa
gccttttcccgcctggagaacctgaagattcacctgaggagccacacaggagagaagccg
tacctgtgccagcatcccggctgccagaaagctttcagcaactccagcgaccgagcgaag
catcagcggactcacctggacacgaaaccatatgcctgtcagatctctggctgcactaag
cgctacacggatcccagttcgctccgcaaacacgtcaagatccactcggcgaaggagcag
caggtgcacaggaagctgcggccgtgcccccacctggagcaggacgtcctgagcgactgc
ctgtccatgcagcagctccagagctccgccccctcgcagcctcctcccgcactgaccgca
gacatctacgcaggcctatacgctgactccaacaccccccatcacgctgcctcaggggag
ctcctcccccctaaccctgcctccgtccccgacctgaccccccgacaacaccgactggac
caggaccttggaagtcctcatcatctgtcccctctgacggccatggatggagccagggat
ggcatgtcaggccccctcctgccccccgggctgaaggcagatcctcctctggagaaacag
cactcccaccttcatcacaaaccgtatcctcagtaccatcatcatcatcatcagtcagca
ggtgaagaataccagggcaactttcagagctgcttccacttcggagactcctacaggatg
gagcaggcggtggacggcgtccacgcccccggagactcgcacctttactcctcccaccag
cacaacggcttccacatgccggccggcggccccggctctgcaggcttcggtttggtgccg
gagctgcagggcggcgccgcgtgtccgttcccccccaccgcagaggagaacctgttcttc
caggggggcagcttcgaccgcagcttgagccacatggcgtccgtctacaccgagacatga
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