KEGG   Oryzias melastigma (Indian medaka): 112136987
Entry
112136987         CDS       T07439                                 
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112136987
Enzymes [BR:oml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     112136987
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     112136987
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112136987
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5 DUF4537 LBR_tudor
Other DBs
NCBI-GeneID: 112136987
NCBI-ProteinID: XP_024114839
Ensembl: ENSOMEG00000006635
UniProt: A0A3B3D5N0
LinkDB
Position
LG4:5078359..5095321
AA seq 1171 aa
MTTDHSVQSEAFRVMTFTPSKEEFKDFVRYVGYMESQGAHRAGMAKVIPPKGWKPRGTYD
DVDDLLIPAPIQQVVTGQSGLFTQYNIQKKPMLVHEFQKTSNLDKFCSPRFADFNELEKK
FWKNLTFNPPLYGADVRGTLFDPDVPDWNISRLDSILNAVEGECDDKIKAAQGPNLDFGM
WKSAFAWHTEEMDLYSLSYMHYGEPRSWYVVPPEHGRRLEKLAKGFFPGNAQNCEAFLRH
KMTLISPTILKKYSIPFEKVIQEAGQFIVTFPFAYHAGFNHGFNCSESTNFATQRWIEYG
KQATLCSCRQDSVKISMDAFVHKYQPERHSLWKAGKDHVLIDHCKPTPEAAEFLRKADVP
PSKETSSKRSAEEPSDRTQNNSLKPHVGRRRQKEAGKTSNSDDVKSELTEKETEEVEPEK
SDLTEKDNEGAEPEKSELTGKDTEGAEPEKSKLMEEDTEGAQPVKSKLMEEDTGGAELEK
SKVTEKKTEGAEPEKSKLMEEDTEGVELEKFEVTEKKTEGAEPEKPELMEKKTDRAEPEK
PELMEVESPAKISVPSDIEGVELEATKEKDSKQRLQSKVQSKSSNRKGVNRRSPAKKEKN
GETVTDGSLYQPPAAKLVSSNSKETGHGVEPPGETQPSPGGLFQRPLSSADVLHVHSYAK
GDYGEDVPPKEEENDGRDFQKEEDFRPGNKDVMEITETGDQDTEKVQVQLPNHQPPPQDC
ISDEEGADEIPTSEEFGLEVENWAKALAHLWQNRPHNLKKEKEYNQRMGSKPPYCSICSL
FHTYQQTEYKRADAPVMGAGGHMRTKPLIPEMCFTTTTEEDSEQQDESVAPYLEEDGSSL
LISCSQCCVRVHTSCYGVDPATVSKEWKCARCKANAMTEDCCLCWLRGGALQRTSNHKWV
HVLCAVAVLEARFVSIFDRSPVDLSGIPLQRFKLKCYYCKKRMKKASGCCVQCSHGRCPT
AYHPTCAQAAGVLMQPGEWPFVVHVTCCRHKGPAQIERNKAAMHELSVGQKVICKHKNGR
YYQCDVIQLSKETFYEVNFDDGSFSDNLFPEDIVSRDCAQLGPPPSGEVVQVRWTDGLVY
GAKFVAAHITQMYLVEFEDGSQLTAKRDDVYTLDEELPKRVKSRLSKASDMRFDGIFEEK
EIIRESKRQRVINSRYRGDYIEPVIYRAIME
NT seq 3516 nt   +upstreamnt  +downstreamnt
atgaccacagatcactcagtccaaagtgaggccttcagggtcatgaccttcaccccctcc
aaggaggagttcaaggattttgtacgttatgtcggctacatggagtcacagggagctcac
cgagcgggaatggctaaggttattcctcctaaaggctggaagccaagagggacgtatgac
gacgtggatgacctgctgattcctgctcccatccagcaggtggtgactggtcagtcaggc
ctcttcacgcagtacaacatccagaagaagcccatgctggtccacgagtttcagaagacc
tccaacctggacaagttctgtagccccaggtttgctgacttcaacgagctggagaaaaag
ttctggaagaacctgaccttcaaccctcctctttacggcgcggacgtcagagggacgctg
ttcgatcccgacgtgccggactggaacatcagccgtctcgactctattctcaacgcggtg
gagggtgagtgcgacgacaagatcaaagcggcccagggaccaaacctggacttcggaatg
tggaagagcgccttcgcctggcacacggaggaaatggacctgtacagcctcagctacatg
cattatggagagcccaggagctggtacgttgttcccccagagcacggcagaaggttggag
aagctggccaagggttttttccccggaaacgctcaaaactgcgaagctttcttgcggcat
aaaatgacgttaatttctcctacaatcctgaagaagtacagtattccatttgagaaggtg
attcaggaggcggggcagttcatcgtgacattcccgtttgcttaccacgccggctttaac
cacggcttcaactgctccgagtccacaaactttgctacgcagcgatggatcgagtacgga
aaacaggcaacgttgtgctcctgccgtcaggactcagtgaagatttccatggatgcgttc
gtccacaagtatcaaccagagcgccacagcctgtggaaggcggggaaggaccatgttctt
atcgatcactgcaagccgactccagaggccgcagagtttctaagaaaagcagatgtccca
ccctcgaaggagacttcttctaaaaggtcagcggaggagccttcagatcgcacccagaac
aacagtctcaagccgcacgtgggtagaaggcgtcagaaggaggccggaaagacctccaac
tccgatgacgtgaaatccgagctgacagagaaggaaactgaggaggtggagccagagaaa
tccgatcttacagagaaggacaatgagggggcggagccagagaaatccgagcttacaggg
aaggacactgagggggcggagccagagaaatccaagctgatggaggaggacactgagggg
gcgcagccagtgaaatccaagctgatggaggaggacactgggggggcagagctggagaaa
tccaaggtgactgagaagaaaactgagggggcggagccagagaaatccaagctgatggag
gaggacactgagggggtggagctggagaaatttgaggtgacggagaagaaaactgagggg
gcggagccagagaaacccgagctgatggagaagaaaactgatagggcggagccagagaaa
cccgagctgatggaggtggagtctcctgcaaagatttctgtcccatcagacatcgaggga
gttgagctggaagcaaccaaggagaaggacagcaagcaacgacttcagtccaaagttcag
tcaaaaagcagcaacagaaaaggcgtcaacagacggagcccagcgaagaaagagaaaaat
ggagagacagttacagatggttctctttatcaacctcctgccgccaagctggtttcttca
aactctaaagagactggccacggggtggagcctccgggggagacccagccgagcccaggc
ggcctgtttcagaggccactgagctctgcagatgtcctgcatgtccacagctacgccaaa
ggagactatggagaggatgtcccaccaaaggaggaggagaacgatggcagggactttcag
aaggaggaagactttagacctggcaacaaagacgtgatggaaattaccgagactggagat
caggatacagaaaaagtccaggtccagcttccaaaccaccagccgcccccccaggactgt
atcagtgacgaagagggcgctgatgagattcctacctcagaggagtttggtttggaggtg
gagaactgggcaaaagctctggcccatctgtggcagaacagaccacacaacctaaagaaa
gaaaaggaatacaaccagcgcatgggcagcaaacctccatactgctccatctgctcactc
tttcacacctaccagcagacggagtacaaaagggccgatgcccctgtcatgggggccggg
gggcacatgcggaccaaacctctgatcccagagatgtgcttcaccacaacaacagaggag
gactcggagcagcaggacgagtctgttgctccttatctggaggaagatggaagcagcctc
ctcatcagctgctcgcagtgctgcgttcgagttcatacctcgtgttatggtgtggatcca
gccactgtgagcaaggagtggaagtgtgcacgctgtaaagccaacgccatgacagaggat
tgctgcctttgttggttaagaggcggagctttacagagaaccagcaaccacaagtgggtg
cacgtgttgtgcgccgtggcggttctggaggctcgcttcgtcagcatctttgatcggagt
cctgtggatctgagtggaattcctctgcagagattcaaactgaagtgttactactgtaag
aagaggatgaagaaggcgtccggctgctgtgttcaatgctcgcacggccgctgccccact
gcctaccaccccacctgtgcccaggctgcgggggtcctcatgcagcccggagagtggccc
ttcgtcgttcacgtcacctgctgtcgccacaaaggccccgcccagatcgagaggaacaaa
gcggccatgcatgagctgagcgtggggcagaaggtcatctgcaagcacaagaacgggcgc
tactaccaatgcgacgtgatccagctgtccaaggagaccttctacgaggtcaacttcgac
gacggctccttcagcgacaaccttttcccagaggacatcgtgagccgggactgtgcgcag
ctggggcccccgccgtcaggagaggtggttcaggtgcggtggacggacggcctggtgtac
ggggccaaatttgtggcagctcacatcactcagatgtatctggtggaatttgaagatggc
tcccagctaacagccaagagggacgacgtctacactctggatgaagaacttcccaagaga
gtgaagtccagactgtccaaagcctcagacatgaggtttgacgggatctttgaagagaag
gagatcatccgagagtcgaaacggcagcgagtcatcaactcccgttaccgtggagactac
atcgagcctgtcatctacagggccatcatggagtaa

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