Oryzias melastigma (Indian medaka): 112137043
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Entry
112137043 CDS
T07439
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112137043 (wdr18)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
112137043 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_alt
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_NWD2_C
WDR54
Beta-prop_Nup120_160
Beta-prop_VPS8
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
KNTC1_N
ChapFlgA
Motif
Other DBs
NCBI-GeneID:
112137043
NCBI-ProteinID:
XP_024114919
Ensembl:
ENSOMEG00000017497
LinkDB
All DBs
Position
LG4:31674454..31689808
Genome browser
AA seq
433 aa
AA seq
DB search
MAGMATPLEVIVSADAGSQLWNLTVFDLHSGSSLLSYRGGNSAARSLTVLRGEFLLSAQL
AKNYINVWEIQRKDQLQQKIVCPGMVTCLTASPDGVFLAAGVGEALHLWEVSTGKLLCVL
SRHYQDITCLKFTDDGSHFISGGKDNLALVWNLWGVIQLDASQAPEPRHVLSRHSLPITD
LHCGCMGAQARVATASLDQTVKVWELSSGELLLSVLFDVEIMSVTCDPCEYFLFCGGSDG
NIFQVSLCSQGLVRERSFQSDSEGSQVLKGHGNMVTCLSVSMDGTLLLSGSHDETVRVWD
IQSKQSIRCLAHKGPVTNAVIMPAPANMFLPDSRPAVPLPRFSRHLHTTEDEGGEAGEIC
VRPALYTQKEEETYLQKAEQLHMLMTAVTDRFAWGDSESTKADVAELKEEVQYLNKVNRE
LYEFSTQLLTKPT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccggcatggctactcctctggaggtgatcgttagtgccgacgccggctcgcagctc
tggaacctgaccgtgttcgacctccacagcggctccagcctgctgtcgtaccggggcggg
aacagcgcggcgcgcagcctcacggtgctccgcggggagtttctgctgtccgcgcagctg
gccaagaactacatcaacgtgtgggagatccagaggaaggatcagctacaacagaagatc
gtttgtccaggtatggtcacctgtctgactgcctcacctgacggagtgttcctcgctgct
ggagtcggagaggctctgcatctgtgggaggtgtctacagggaagctgctgtgtgtcctg
agccggcactaccaggacattacctgcctcaagttcactgatgatggcagccattttatt
tcgggggggaaagacaacctggctctggtttggaatttgtggggggtcatccagctggac
gccagccaagctcctgagcctcgtcacgtcctgtctcgtcattctcttccaatcacagac
ctgcactgcggctgcatgggagctcaggccagagttgcaactgcatcgctggaccagact
gtcaaagtgtgggagctgtcttcaggtgagctgctgctgtcggtcctgttcgatgtggag
atcatgtcggtgacctgcgacccgtgcgagtacttcctgttttgtggaggaagtgatggg
aatatttttcaggtgtctctgtgcagtcagggtcttgtccgtgagagatcctttcagtct
gacagtgaaggaagccaggttctgaaaggacatgggaacatggtgacgtgtctgtccgtg
tctatggacgggacgctcctgctgtctgggtcacatgatgagacggttcgcgtctgggac
atccagagcaaacagagcatccgctgtctggcgcataaaggtcctgtgacgaacgccgtc
atcatgccagctcctgctaacatgttcctgcctgacagtcggcccgccgtccctctgccg
cgcttcagccggcacctgcacacaaccgaagacgagggtggagaggcgggggagatctgc
gtccgtcccgccctttacacacagaaggaggaggagacatacctgcagaaggcggagcaa
ctgcacatgctgatgactgctgtcactgacaggtttgcgtggggtgatagtgagagtaca
aaagctgatgtggcagagctgaaagaagaggtccaatacctgaataaggtcaacagagag
ctgtacgagttctccacccagctgctcaccaaaccaacatga
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