Oryzias melastigma (Indian medaka): 112137048
Help
Entry
112137048 CDS
T07439
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112137048 (lingo3a)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112137048 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRR_9
LRR_6
LRRNT
LRR_Zer-1
V-set
Motif
Other DBs
NCBI-GeneID:
112137048
NCBI-ProteinID:
XP_024114927
Ensembl:
ENSOMEG00000004678
UniProt:
A0A3B3BE65
LinkDB
All DBs
Position
LG4:3747133..3766910
Genome browser
AA seq
608 aa
AA seq
DB search
MMGMRDHDVGLLLPFLLLLISVASSQSQGCPQRCDCTARLKAVSCFGKRLAALPDGIPAD
TRVLDLRGNRLRWVERGDLLPFPRLEKLDLSDNVISVLEPSAFSSLQNLQALSLRGNQLK
LVPMGAFSGLTNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGLVG
LRELTIERCNLTSISSQSLSFLHNLVSLRLRYLSISALEDQNFRKLGNLRGLEIDHWPFL
EHISPHCLQGLNLSWLSIKHTNISSVPTSALRSLAHLTSLDLSFNPIAVLESWALRDLVR
LKELHLVSTKLAVVQPYALGGLRQIRLLNLSGNSLVTLEESAFQSVNTLETLRLDGNPLN
CDCRLLWILQRRKTLNFDGASPVCVTPVEVQQQALNAFSDSALFDHFTCQKPKIRNRKLQ
QVSAREGQVVSFSCRAEGEPAPLIFWISPQRRRITTKSNGRLTVLPEGTLEIRYAQVMDS
GTYICIASNAGGNDTYFATLTVSGLPLDATLMANRTYYVGDLNDTNLNDTRVFLKFTLDL
KTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGA
RKFNMKMI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatggggatgagggaccatgacgtgggcttgctcctgcccttcctgctgctcctcatc
agcgtggcgtccagccaaagccaaggctgcccgcagcgctgcgactgcacggcccggctg
aaggccgtgtcgtgtttcggtaaacggctggcggcgcttcctgatgggatcccagcggac
accagggtcctggacctgcgtggaaacaggcttcggtgggtggagcgtggagatctgctg
ccgttcccgcgcctggagaagctggatctgagtgataatgtcatcagtgtcctggagccc
agcgccttctccagcctccaaaacctgcaggcgctgtcactgcggggcaaccagctgaag
ctggtgcccatgggggctttctcaggccttaccaacctgacctcgctggacctcagtggg
aataagatcgtcattctgttagacttcactttccaagacctcaagagtttgaagaacttg
gaggttggtgacaacgacctggtttatatttccaacaaagcctttctgggtttggtggga
ctccgagagttgaccatcgagaggtgcaatctgacctccatttccagccagtctctgtct
ttcctgcacaacttagtgagtctgcggctccgctacctcagcatctctgccttggaagac
cagaacttccgcaaactgggaaacctgcgaggtctggagatcgaccactggccttttctg
gaacacatctccccccactgcctgcagggtctgaatctgtcgtggctgtccatcaagcac
accaatatctcctccgttcccacctcagccctgcgcagtctggctcacctcaccagcctg
gacctgtccttcaaccccatcgccgtgctggagtcctgggctctgcgggacctggtccgg
ctcaaggagctgcatctggtcagcaccaagctggcggtagttcagccttatgcgctgggt
ggtctcagacagatccgtctcctgaacctgtccggaaacagcctggtgacgctggaagag
tcggctttccagtcagtcaacacgctggagacgctgcggctggacgggaatcctctgaac
tgcgactgccgcctgctctggatcctgcagcgcaggaagacgctcaactttgacggtgcc
tcgcctgtgtgcgtgacgccagttgaggtgcaacaacaagctctcaatgctttctctgac
tccgccctctttgaccattttacctgccaaaagcctaagatccggaacaggaaactgcag
caggtttccgcgcgtgagggtcaggtggtgtccttcagctgcagagcagagggcgagccg
gcccctctcattttctggatctctcctcagcgccgccggataaccaccaaaagtaacggc
agactgacggtgttgccagaggggacgctggagatcaggtacgcccaggtgatggacagc
ggcacctacatctgcattgccagcaacgctggggggaatgacacgtacttcgccacgctc
accgtcagcgggctgccgctggatgccacgctcatggccaatcgcacgtactatgtcggg
gacctgaacgacaccaacctgaacgacaccagggtgttcctgaagttcactctggacctg
aagaccatcctgatctccaccgccatgggctgcatcatgttcctgggggtggttctgttc
tgcttcatcctgctgttcgtgtggagccggggccgcggccagcacaagaacaacttctcc
gtggagtactccttcaggaaggtggacggacctgcagccagcggggggcaaggcggagcg
cggaagttcaacatgaaaatgatctga
DBGET
integrated database retrieval system
