KEGG   Oryzias melastigma (Indian medaka): 112137174
Entry
112137174         CDS       T07439                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    112137174 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oml03400]
    112137174 (xpa)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112137174 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N
Other DBs
NCBI-GeneID: 112137174
NCBI-ProteinID: XP_024115101
Ensembl: ENSOMEG00000007485
UniProt: A0A3B3BMU1
LinkDB
Position
LG1:complement(1681769..1686240)
AA seq 275 aa
MDRPESQGANASAPGPEPSPEPELSAAMRAKIERNRQRALMLRQARLANRPLSAVEGGTS
AKVSKTIDSGAGFFIEEEDGGGGGKEVRKVVQEPAPVIESDYLLCEDCQKPFMDSVLSNS
FDLSVCDKCRDAEGKHKLISRTEAKQRYLLKDCDLDQREPPLRFILKKNPHNPRWGDMKL
YLHLQVEKRCLEVWGSEEALEEARETREENREVQKQKRFNKKVKELRRAVRSSVWTKNTV
AHQHEYGPEEVLDPEEDLYRKTCITCQHELTYEKM
NT seq 828 nt   +upstreamnt  +downstreamnt
atggaccggcccgagtctcagggagctaatgcctccgcgcccggtccagaaccgagccca
gaaccggagctttccgccgctatgagggctaaaatcgaacggaaccgacagcgggcgttg
atgctccgacaagcccgcctggcgaaccgtcctctgtccgctgtggagggcggaacgtcc
gccaaagtgtccaaaaccatcgactccggagcggggttcttcatcgaggaggaggacgga
ggaggaggaggaaaggaggtcaggaaggtggtgcaggaaccagctccggtgattgagtcg
gactatctgctgtgtgaggactgtcaaaagcccttcatggactctgtcctcagcaacagc
tttgacctgtctgtgtgtgacaagtgcagagacgcagagggaaagcataaactgatctcc
aggacagaagctaagcagcgctacctgttgaaggactgtgaccttgaccagagagagcct
ccactcagattcattctcaagaagaaccctcacaacccacgctggggtgacatgaagctc
tacctgcacctacaggtagagaaaagatgtttggaagtttggggttcagaggaggctctg
gaggaagccagagagacgagggaagaaaaccgagaggtgcaaaagcaaaaacgcttcaac
aagaaggtcaaagagctgcgcagggcagtgaggagcagcgtgtggaccaagaacacggtg
gcccaccagcatgaatacgggcctgaggaggtgctggatcctgaggaggacctttacagg
aaaacctgcatcacctgccagcatgaactgacttatgagaagatgtag

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