KEGG   Oryzias melastigma (Indian medaka): 112137207
Entry
112137207         CDS       T07439                                 
Name
(RefSeq) RNA exonuclease 5 isoform X2
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112137207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oml03009]
    112137207
Ribosome biogenesis [BR:oml03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112137207
SSDB
Motif
Pfam: RRM_1 RNase_T TSKS
Other DBs
NCBI-GeneID: 112137207
NCBI-ProteinID: XP_024115151
Ensembl: ENSOMEG00000019491
LinkDB
Position
LG1:10993575..11034551
AA seq 789 aa
MESSSSIQCSSKKRQIQTPAAQKMVKRPKTELEEDVMQPGPPPASPRVSVRSHHLQQPLS
LSQLAELIHFAALGKSAGLQQPSWCRLRHHKKVTGVNIVIVEGVTQNLFYKNYLMMKHLR
TSYSTRMTFASPPNNVASGIFSSEVPKVDLISAPRPNDKLKKALKNHPVVTKFGMEKKGL
TAYLLTQEERIKSHYPVKGFVGFEDFLCTDSVDCVSDCSPLYGLDCEMCLTEKGYELTRV
SLVDSCGKCIMDELVKPQNRVLNYLTKFSGITAAMLRPITTTLREVQHKLRELLPGDAVL
VGHSLNNDLAALKVIHPHVIDTSLLYKRELGQKFKLKVLAETILDKKIQTEEREGHDPIE
DAAAALELAQYFIERGPCQVVELHLEDLWGYKLEEEPPDCTSILTPSFRFADVLQTLGRS
VTFLGKRADISLDLSHQQWFISDKEMLASFKRQTKKPFLSVLQFSSFLDHMKRCFPDQQQ
LHRSVCAHLRGMCVVFAGPFPAGFSEKKVKRLFGRCGAVRRIQMLNTSVRVHAEVEYELL
EGAVLALRTLNGLNVKGQPIKVQRPLSESTLDLDLHLDALEGDPLSSRVLYAVLSRSTST
QLNGHSLNGKRLAAENGVSAAKINGQSPLMSEESVRDSFSRFGAVKSITVPEKSGKCAKH
AFIKFGSPEGKEAAVSSSEDLQQDNYLICPSLTPPHLVTWVAATTTSAEGTDEKILNICP
QETPTKPVEENQGTDVMMKKLDRQLGKVFRSLPDVTLSVVLLVGAGSMESEHPGLCLLEV
KQTKTKCFL
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggaatcttcttcctcaatacaatgcagctcaaagaagagacagatccaaacccctgca
gcacaaaagatggtcaaaaggccaaagacggagctggaggaagatgtgatgcagcctgga
cctcctcctgcttcaccacgagtttcagtgcgatctcatcatctccagcaaccactctct
ctctctcagctggcagagctgatccattttgctgctctggggaaatcagccggcttgcag
cagcccagttggtgccgtctccgccatcataaaaaggtaacgggtgtaaacattgtgatc
gtggagggagtgacgcagaatctcttctataagaattacctcatgatgaagcatctcagg
acaagctattccactaggatgacttttgcatcaccgcctaacaatgtggcatctggaatc
tttagcagtgaagtacctaaagttgacctcatatcagctcccagaccaaatgataagctt
aaaaaagctctgaaaaatcatccagttgtcactaaatttgggatggagaagaaaggacta
acagcatatcttctaacccaggaggagaggataaaaagccactatcctgtcaaagggttt
gtaggttttgaggacttcttgtgcacagattcagtcgactgtgtctcagactgtagtcct
ctatatggactcgactgtgaaatgtgtctaacagaaaagggctacgagttgacccgcgtg
tctctagtggacagctgtgggaagtgcatcatggacgaactagtgaaaccgcagaaccgt
gtccttaattatctcacaaagttttctggcatcactgcagcaatgttgcgaccaatcaca
accactctgagggaggtgcagcataaactcagggagctgctgccgggggacgcagttctg
gtgggacattccttgaacaacgatctcgcggctctgaaggtcatccatccacatgtgatc
gacacctcgcttctctacaaacgagaactgggacagaaatttaagctgaaggttctggct
gagacgattctagataagaagattcaaaccgaagagagagaaggtcatgatcccattgag
gacgctgcagcggctctggaactggctcagtacttcatcgaaaggggaccatgtcaggtt
gttgagctccatctagaggatctttggggatacaagctggaggaagaacctcctgactgc
acttccatcctcacaccaagtttcaggtttgctgacgttctgcagactctgggtcgctca
gtaacctttttaggaaagcgagctgatattagtctggacctgtcccatcagcagtggttc
atctctgacaaagaaatgctggcgtctttcaaaagacaaaccaagaagccgttcctctcc
gtccttcagttttcctcgtttttggaccacatgaagagatgcttccctgaccagcagcag
ctgcaccggagtgtgtgcgcacaccttcgaggcatgtgtgtggtgtttgctgggccgttc
cccgcaggtttctctgagaagaaagtgaagcggctgtttggccgctgtggagcagttcgg
agaattcagatgctgaacacgagtgtcagagtccatgcagaggtggagtatgagctgctg
gagggagccgtgctcgctttaagaactttaaatggactgaatgtgaagggccagcccatt
aaggtgcagaggccgctgtctgagtccacgttagacctggatctacatcttgacgccctg
gagggcgatcctctgagttcccgtgttctctacgccgtcctgagtcggagcacgtccacg
cagctcaatggacatagtttaaatggcaaacgcttagcagcagaaaatggggtttcagct
gcaaaaatcaacgggcagtcgcccctcatgtctgaagagagtgtcagagattcgtttagt
cgctttggtgcggtgaagagcatcacggtgccggaaaaatctggaaaatgtgccaaacat
gccttcataaagtttggaagtccagagggcaaagaagcagctgtcagctcctctgaagat
ctacagcaagacaactacctaatttgcccatccttgactccgcctcatttagtcacatgg
gttgccgcgacaacaacatcagctgaaggcacagatgagaagatactcaacatttgccct
caggaaacacccacaaaacctgtggaggagaatcaaggaactgatgtcatgatgaagaag
ctggaccgccagctgggaaaagtgttccgatcgctcccagacgttaccctgtctgtagtc
ttactggttggagctggcagcatggagagtgaacatcctggtttgtgtttgctggaggtc
aaacaaacaaaaacaaagtgttttctttag

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