Oryzias melastigma (Indian medaka): 112137208
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Entry
112137208 CDS
T07439
Symbol
eri2
Name
(RefSeq) ERI1 exoribonuclease 2
KO
K18417
ERI1 exoribonuclease 2 [EC:3.1.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112137208 (eri2)
03036 Chromosome and associated proteins [BR:
oml03036
]
112137208 (eri2)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112137208 (eri2)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
112137208 (eri2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Zn_ribbon_GRF
Rv2179c-like
KELAA
Motif
Other DBs
NCBI-GeneID:
112137208
NCBI-ProteinID:
XP_024115153
Ensembl:
ENSOMEG00000019453
LinkDB
All DBs
Position
LG1:complement(11021239..11026484)
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AA seq
709 aa
AA seq
DB search
MSTKKLAKTLGLVKQRSKNVSSASKRVISNQIFSYLIVIDFESTCWREKNNYSQEIIEFP
AVLLNTSTGDIDSEFHTFVQPQEHPILSEFCTELTGITQVQVEAGIPLQICLPRFNRWLQ
SLQLEMGFTFPNKQQTSSASSSAQKLCTFVTWSDWDLGVCLQYECKRKQLHKPDVLNNWI
DLRSTYRMWYNRKPKGLNGALQDLGLLFDGREHSGLDDAKNTARLAAKMMRDGCVMKITR
SLDRTPVVVQKNATHLIENTKEKLTVSKNEDGPSTSKSFLPKVLNKACQKQTFPEKNNES
SAVVVGSTSLIKSVQKCESLISPKTLLNAPPAAAALWGHTRTPPAARMSSTPMNLHSTHN
SSSHVLCSTTISCLTDVPQANQRSDAASVDDMEDVELLVDPEERCGSYDDVVLECGENEG
DSEFHAGICDEEESENSHSSRNDVTVGVNLKERGTVVQRNLGNILQNSLIWENKILVSTR
SVFNPKKEMTNLVKSDHCFAVPKPVNWRKQNQSKIVPSPKVQEKSYKNNTKDVLGTNFLV
SKNISTLNIISSKPKPDITKHVRPLNSPLTIYSEPEKRSSSVSLHTPNNVLSTLPTNSFS
SHVNRSCVSGTTKGQKMTSPLCACGRRAKRQVVSNGGPNHGRGFYCCPVRRSGGKGKMEK
RCDFFKWESALMKSNAVDASVFRSSVSFCHMNSSLSHYLANKAQLRKSC
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaagaaactagcaaagacattaggattagtgaagcagaggagtaaaaatgtt
tcttctgcatcgaaaagggttatatcaaatcaaatattttcatacctgattgtgatcgac
tttgagtctacttgctggagagaaaaaaataactacagtcaagaaatcattgagttcccg
gctgttctgctgaacacctccacaggggacattgattcagagtttcacacttttgttcag
ccccaggagcaccctattctttcagagttctgcaccgagctaacaggaattacacaggtg
caagtggaagcaggtatcccgctccagatatgtctgccacgcttcaaccgctggctacag
agcctgcagctggagatgggattcacatttcctaacaaacaacagacatcctctgcctct
tcttctgcacaaaagctttgcacctttgtaacgtggtcagactgggatcttggagtttgt
ttgcagtatgagtgtaaacgcaaacagcttcacaaacccgatgttctcaacaactggata
gacctgagaagtacctacaggatgtggtataacaggaaacccaaaggcctgaacggcgca
ttacaggatctaggattactgtttgatggcagagaacattctggtttggatgatgccaaa
aatacagcacggctggcggccaaaatgatgagggatgggtgtgtgatgaagatcactcgg
agtttggacaggactccagtagtggtccaaaaaaatgctactcatctgatagaaaacaca
aaagaaaaactgaccgtcagtaaaaatgaagatgggccgtccaccagcaaatcttttctt
cctaaagttttaaacaaagcctgtcaaaaacagacgtttccagagaagaataatgaaagt
tcagccgtcgtggtgggctccacttcacttataaaatctgttcaaaagtgcgaaagcctc
atttcaccaaaaacattactgaacgccccaccagcagcagcagcactgtggggtcacact
cgcacaccaccagctgcccgcatgtcatctacccccatgaaccttcactcaacacacaac
agcagcagccatgttttatgttccaccactattagctgcttgactgatgtacctcaagca
aatcagcgctctgatgcagcatctgtggatgacatggaggatgtggagcttctcgtggac
ccagaggagcgctgtggttcatatgatgacgttgtgttggagtgtggagaaaatgaggga
gattcagagtttcatgctggaatctgtgatgaggaagagtctgaaaactcacactcatcc
aggaatgatgtcacagttggggtgaacttaaaggagcgtggaactgttgtgcagaggaac
cttggaaatattttacagaattcattaatctgggaaaataagattttagtatcgacgagg
agtgtctttaatcccaaaaaagaaatgacaaatcttgtaaagtccgatcactgttttgcg
gttcctaaacctgttaactggaggaagcaaaatcagagcaaaattgtcccttccccaaaa
gtgcaagagaaatcctacaaaaataatacaaaagatgtacttgggacaaatttcttggtc
tcaaaaaacatttccactctaaatattatttcttctaaacccaaaccagatatcactaaa
catgtccggcctctgaattcacctttgaccatttactctgaaccagaaaaaagatcatcg
tctgtctctctccacacacccaacaacgtcctctccactctaccaaccaattccttctcc
tctcatgttaaccgttcctgtgtctctgggacaactaaagggcaaaagatgacctccccg
ctgtgcgcctgtggcaggcgtgcaaagcggcaggtcgtgtcaaacggcggtccaaaccac
gggcgagggttttactgctgtccggtccgccgatcaggaggcaaaggcaagatggagaaa
aggtgtgacttttttaagtgggagtcggctctgatgaagagtaatgcagtggatgcttct
gttttcaggtcctccgtgtcattttgtcacatgaactcctctctatcacactatctagct
aataaagctcaactaagaaagagctgttaa
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