Oryzias melastigma (Indian medaka): 112137216
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Entry
112137216 CDS
T07439
Name
(RefSeq) protein capicua homolog isoform X1
KO
K02620
transcription factor 7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04310
Wnt signaling pathway
oml04520
Adherens junction
oml04916
Melanogenesis
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112137216
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112137216
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112137216
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112137216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112137216
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
112137216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
GM130_C
Motif
Other DBs
NCBI-GeneID:
112137216
NCBI-ProteinID:
XP_024115170
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Position
LG1:complement(7607245..7610450)
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AA seq
214 aa
AA seq
DB search
MSTAEICEAFERIIEGMEWEDIVSTLMEIIEAELGTATPPPLSLAGSQSLPDVAWCPPLA
AGSTQMKRREANVPFITFYPIYFLLAPPTAEEVYQLSPAAPLSSSSSAKKQDDHVKQPPN
ASMIFSREQKAKVKAELNIKSSSALNKVPRKRCTTLSPQEKEKHFKQEFQNEQEHPGRSS
AHNCVKKRKRASASASDEESAPGENNSDSVSPAP
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgctgaaatctgtgaggcgtttgagcgcattattgaggggatggagtgggag
gacatagtctccacattgatggagattatcgaggccgagttggggacagcaacacctcct
ccgctcagcctcgccgggtctcagtccctccctgacgtggcgtggtgccctcccctggct
gctggcagcactcagatgaagagacgggaggccaacgttccattcatcaccttttatccc
atctacttcctgctagccccgcccacagcagaggaggtctaccagctttctcctgctgct
cctctgagctccagctcctcggcgaagaagcaggacgatcacgttaagcagcctcccaac
gcctccatgatcttttcaagagagcagaaggcaaaggtcaaagctgagctcaacattaaa
agtagctcagctttgaataaagtcccgagaaagaggtgcacgactctttctcctcaggag
aaggagaaacacttcaagcaggaattccagaacgagcaggagcatcctgggaggagcagc
gctcataactgtgtaaagaagagaaagagagcttctgcttctgcttctgatgaagagtct
gcaccaggagaaaataactcagactccgtctctcctgctccataa
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integrated database retrieval system
