Oryzias melastigma (Indian medaka): 112137220
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Entry
112137220 CDS
T07439
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112137220 (lrba)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Others
Others
112137220 (lrba)
Endosome - Golgi transport
112137220 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112137220 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
KNTC1_N
SUKH_6
Motif
Other DBs
NCBI-GeneID:
112137220
NCBI-ProteinID:
XP_024115175
Ensembl:
ENSOMEG00000003310
LinkDB
All DBs
Position
LG1:14614861..14791607
Genome browser
AA seq
2858 aa
AA seq
DB search
MASAEAAAADGAGAAALNPGVPIRGIRMKFAVLAGLVEVGEVSNRDIVETAFNLLVGGQF
DLEMNFIIQEPESIVCLVELLDKCEPTCQAEIWSIFTAILKKSVRNLQACTEVGLIQQVL
QRIATTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPCHAVKLLSVLKYMA
LRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKDKPYLYCFR
TNKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTIVHVYNRWKNSEMSC
FVNGELASFGDIPWFVNTSDTFDKCFLGSSETADVNRVFCGQMGAVYLFAEALSAAQILA
IYQLGPGYQGTFKHRAESDLLFAEHHKTLLYDGKLSSSIAFAYNPRATDAQLCLESSPKD
NASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYRQPSSQELDTSVC
CTLLSFMMELLKNSVAMQEQVLACKGFLVIGYTLERSSKVHVTRPVLDIVLAFSRYLSNL
QNGILLLKQLCDNILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRRVGTVLQVM
HTLKYYYWIVNPQDRSGVVPKGVDGPRPNQKELFSLRAFLLLFVKQLIMKDHGVKEDELQ
SILNYLLTMHEDENLMDVLQLLVALMSEHPGSMVQAFDQRNGIRVVYKLLGSKSEGIRVQ
ALKVMGYFLKSLSPKRKTEVMMSNGLFSLMTERLVLHSNHFTMTTYNVLFEILTEQICTQ
VIHKQHPDPDSTVKILNPQILKVIAALLKSSPQSPESMEVRRVFLSDMIKLFNNSRENRR
SLLQCSVWQDWMLSLCFINPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSI
THSKVTFEQHKENLSRMFRQYQDQEFAGSGAAVRTVSGVSESSEATKCINGSSAEETAPS
TVIELTVDSLSQKSLDSASNSTLTSRPRSDSEPTSITVSNILARDEDKEQKGPEENSSDG
LDAGKENEVAVIEMTNSKEADSEPSRSDDSAAEREDKKSENKDVSSTSETENPPEQADEA
EQTLSEHAASLDNSGAGGASVFNEDLVDVSSVSDQVQPSDADESLEESYVSAATGEDGDV
GEKGDGEEDGKRKVSDQGEEEVKNEEQTESQEQEKGDENTSTDAPQQSDAEAPKEDVSDT
QSSSVAASKDQQPSDATPTSSSQEAPNQPSNAGGTTTEETQSSAADTNPSSSDTPKSPDS
LSKTKEIKIARLDVSNVALDTKGLELKETSSADTNQGQAATATAPEAGSSSGQQREGSTS
APRSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSNTTKTIPDIVNNSENIVFVHNS
VHLISQVVDNLIMACGGILPLLSAATSSSHELENIEPSQGLPLEASVTFLQRLINLADVL
IFASCLNFTEIEAEKNMSSGGILRQCLRLVCAMAVRNCLECQQTQLKHGAESSVRSHPAM
PGTLLGTAKSASAQSPVDAVTGGMSPIRDLDRLLQDMDINRLRAIVFRDIVDSKQAQFLA
LAVVYFISVLMVSKYRDILEPHNDKRRPQRSQSARSSDSGAVSGGTEVDGSSSLRRYDSG
IGEDHTSAAASEADLSSSGMAHGPDAVSEALSTLSSEVRPALSADSKGKNVKDILRSLVS
TPAEDVMVDPALLPPTFLGSVGDVARDSSLQFRSFDRSVVVAPKKMGTVPSPAASKPAPA
STAGSGAPVDNVAVVSSADASQSTSADATVSGGQVPASPSLPSVPPLSPVTQNTAPSMSI
SERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVML
LCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAE
FESLCAQYAAEKRDEEKMCDHLIRAAKYRDHMTGTQLIQKIVNILTDKHGAWGSSSLSRP
REFWRLDYWEDDLRRRRRFIRNPFGSSHSEATLKAAAEHASDEDILKGKQSIRNQVLGNQ
NSESETSLEGDDDTLSSLEEKDLENLTGPVNLSTSAHLVAPAAVVKGTLSVTASELFFEV
DEDEPSFKALDPKILAYTEGLHGKWLFTEIRAVFSRRYLLQNTALEVFMANRTAVLFNFP
DAATVKKVVHCLPRVGVGTNFGLPQTRRISLATPKQLFKASNMTQRWQRREISNFEYLMF
LNTISGRTFNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRY
ESWEDDQVPKFHYGTHYSTSSFTLMWLLRIEPFTTFFLNFQGGKFDHADRTFSSVSRAWR
NCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMEDGTVVSDVVLPPWAKSPEEFVRINR
LALESEFVSCQLHQWIDLIFGYKQQGPEATRALNVYYYLTYEGAVNLSSINDPLLREAVE
SQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPMMFTEQMQQDVIMVLKFPSNSPVTYV
AANTQPGLASAAIITVTANRLFAVNKWHGLTGHQSSAEQQYQLPVEIDPLIASNVGTHRR
QISDLLDQSIHISSQCFVITADNRFILLCGFWDKSFRVYSTDTGKLTQIVFGHRDVVTCL
ARSESYIGGDCYILSGSRDATLLLWYWNGKLSSIGETPSTFTTPRAILTGHDCEVTCASV
CAELGLVISGCKEGPCLIHSMNGDLLRTLEGPDSCLQPRLIQSSSEGHCVVYYEKGHFCL
FSVNGKLLGHMEVEDSIKAMLLSRDGQYLLTGGDGGVVCVWQVHNLKQLFSYPGCDAGVR
SMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8577 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgcggaggcagcggcggcggatggagcgggcgccgcggcgctcaaccccgga
gtgcccatccgcggaatccgcatgaaattcgccgtgctcgccggcctggtggaagttggg
gaagtttccaaccgggatattgtggagacggcgttcaacctgctggtgggcggtcagttc
gaccttgagatgaacttcatcattcaagaaccggagagcatcgtgtgcctggtggagctg
ttggacaaatgcgagccgacctgtcaggccgagatatggagcatcttcaccgccatcctc
aagaaaagtgtccggaacctgcaggcgtgcactgaagtgggtcttattcagcaggtgctc
caacggatcgccaccactgacagcatgatagcagacctgctggtggacatgctgggtgtc
ctcgccagctacagcatcacagtgaaagagctgaagcttttcttcagcaagctgcaaggg
gagaaaggccagtggccatgtcatgcagtgaagctcctgtctgtgctgaagtacatggct
ctcaggaacggtcccgactcattcttcagctttccagggaaaaatgctgctgcaatcgct
ctgccccccatagcgaaatggccataccagaacggatttacatttcacacgtggctgcga
atggatcctctgaacaacatcaatgtggacaaagacaagccttacctttactgcttccgc
accaataaaggcctggggtattcggcacactttgtaggcggctgtttgatagtgacgtcg
ctaaaatcaaagggcaaagggttccagcactgtgtgaagtacgacttcaagccccagaag
tggtacatggtgactatagttcacgtctacaaccgctggaaaaacagtgaaatgagctgc
tttgtgaatggagaactggcttcctttggggatattccctggtttgtcaacaccagtgat
acatttgacaagtgtttcctgggatcatcagagacggcggatgtaaaccgagtgttctgt
ggacagatgggggcagtttacctgtttgcagaagctctcagcgccgctcagatcttggct
atctatcagctgggtccaggctaccagggcacgttcaagcaccgggccgagagcgacctg
ctgttcgcggagcatcacaagactctgctgtatgacggcaagctgtcctctagcatcgcc
ttcgcatataacccgcgcgccacagatgctcaactctgcctcgagtcctcccccaaggac
aatgcctccatttttgtgcactcaccccacgcactgatgctgcaggacgtgaaggctgtg
gtgactcactcagtccagagcggcattcactccatcggtggcgtgcaggtcctcttccct
ttgtttgcacagctggattaccgccagccttccagccaggaactggacacctctgtttgc
tgcactttgctgtccttcatgatggagctcctgaagaactctgtggctatgcaagagcag
gttttagcctgcaaaggcttcctggtcattggctacacgttggagaggtcttccaaggtg
catgtgacgcgacccgtcctggacatcgttctggccttctctagatatctcagcaacttg
cagaacggcatcttgctactcaagcagttgtgtgacaacatcctgttcaaccctgccatc
tggattcacgcacctgccaaggtgcagctgactctctacacatacttggcgacagagttc
atcagcactgtgaccatctacaatgcaatacgcagggtgggcactgtgcttcaggtcatg
catacactaaaatactactactggattgtcaacccgcaagaccgcagtggagtggtgcct
aaaggcgttgatggtccaaggccaaaccagaaggagctcttctctttacgagcatttctc
ctgctgtttgtcaagcagctaataatgaaggatcatggggtgaaagaagatgagttgcag
agtatcctcaactacctcctgaccatgcatgaggatgaaaacctcatggatgtactgcag
ctgctggtggctctaatgtctgaacatcctggttcaatggtccaagcctttgaccagaga
aatggaattcgagtggtttataagcttttgggctcaaaaagtgaaggaatcagagtccag
gcactgaaggtcatgggctatttcctgaaaagcttgtcaccaaagagaaaaaccgaggtc
atgatgagtaacgggctgttctcgctgatgactgagcgcctggtgctccactccaaccac
ttcaccatgacaacctacaacgtgctctttgagattctcacagagcagatctgcactcaa
gtgatccataaacagcacccagacccagactccactgtgaagattctcaacccacagatc
ctgaaggtgatagctgcactcctgaagagctccccccaatcccccgagagcatggaggtg
cgcagggtcttcctgtcagatatgatcaaactgttcaataacagccgagaaaaccgcagg
agcctgctgcagtgctccgtatggcaggactggatgctctctctgtgcttcatcaatcca
cgaaacagcgaagagcagaaaatcaccgagatggtgtacgccatcttccgcattctgctc
taccacgccatcaagtacgagtggggcggctggcgcgtctgggtggacacactgtccatc
acccactccaaggtcactttcgagcaacacaaagaaaatctgtctcggatgttccgtcag
taccaggatcaggagtttgccggctccggagccgccgttcggaccgtctccggcgtcagc
gaaagctcagaggccacaaaatgtattaacgggtcatcagcagaggagacggcgccctcc
actgttatcgagctgacggtggacagtctttctcagaaatccctcgactcagcatccaac
tccaccctaacctccaggccacggtcggacagcgagcccacatccatcactgtgtccaac
atcctggccagagatgaagacaaagagcagaaagggccggaggagaactccagtgatggc
ttagatgctggaaaggaaaatgaagttgcagtgattgaaatgaccaactctaaagaggct
gattctgagccatccagaagtgatgactcagctgctgagagagaggataaaaaatcagaa
aacaaagacgtttcctcgacctctgaaaccgaaaaccctccagaacaagcagacgaggcc
gagcaaacattatctgaacatgcagcctctctggacaactctggagccggtggagcttct
gtcttcaacgaggatttggtcgacgtgtcatctgtaagcgaccaagtccagccaagtgat
gctgatgaaagtttagaggagtcttatgtttctgctgcaactggagaagatggtgatgta
ggagaaaagggtgatggagaagaagatggtaaaaggaaagtcagtgatcagggagaagag
gaggttaaaaatgaagaacagacagagagtcaggagcaggaaaagggagatgagaacact
tcaactgatgcacctcaacagagtgacgcagaagctcctaaagaggatgtcagtgataca
cagtcttcctctgtagcagcgagtaaggaccagcaaccctcggacgccacaccgacctct
tcatcccaagaggctccaaatcagccttcaaatgctggtggcacaaccacagaagaaacc
cagtccagtgctgccgacacaaacccctccagctctgacacccccaagagcccagattct
ctcagcaagaccaaagagatcaaaatcgccaggctggatgtgtccaatgtggccctagac
actaaggggcttgaactgaaggagacctcctcagcggacacaaaccagggtcaggcagct
acagcaacagcaccagaggcaggaagttcctcaggccagcagagagaaggcagtacatca
gcgcctcgctccaccatgttccgcatcccagaattccgttggtcccacatgcaccagcgt
cttctcacagacctgctcttctctatagagacggatgtccagatgtggagaagtaacacc
acaaagacgatcccagacattgtgaacaacagcgagaacatcgtgtttgtccacaacagt
gttcacctcatctcccaggtggtggacaatctcatcatggcttgtggaggcattctacct
ctgctgtccgctgccacgtcttcctctcacgaactggagaacattgagccgtctcaaggc
ttgcctctggaggcttcagttaccttcttgcagcgcctcatcaacctcgcagatgttctc
atttttgccagctgtctcaacttcacagagatagaagcggagaaaaacatgtcctctggg
gggattctgcggcagtgccttcgccttgtgtgtgctatggcagtgagaaactgtctggag
tgccagcaaacccaattaaagcatggtgcagaaagctcagtgcgcagccacccagccatg
cccggtactttactggggacagctaaatctgcgtctgcgcagagtcccgttgatgcagtg
acaggcggcatgtctccaatcagagatctggaccgcctgcttcaggatatggacattaat
cgcctcagggctatcgtcttcagagatattgtggacagtaagcaggcccagttcctggct
ctagctgtggtctacttcatctcagtcctcatggtttccaagtaccgggacatcttggag
ccacacaatgataagagacgccctcaacgctcccagtctgctagaagttcagacagtgga
gctgtttctggtggaacagaggtggacggcagctcctctctccgtcgctacgattctggc
atcggcgaagaccacacctcggcagcggccagcgaggcagacctgtcgtcctctggcatg
gctcacggtccagacgccgtctcagaagccttgtcgacgctctcttctgaggtcagaccc
gctctgtccgccgactcaaagggcaagaatgtgaaggacatcctgcgcagcctggtgagc
actccagctgaggacgtcatggtggaccctgctttgctgccgccgaccttcctcggatca
gtgggggacgtggccagagactcctccctccagttccgctcttttgatagaagtgttgtc
gttgcccctaagaaaatgggcacagtgccatctccggctgcttccaagccggccccagcg
tccactgctggatctggagccccggtggacaatgttgctgtggtgtcgtccgctgatgcc
tcccagagcacctctgcagatgctacagtttcaggcggccaggttccagccagcccaagc
ctgccatctgtccccccactgtcccctgtgacccagaacacagcccccagtatgagtatt
tccgagcgtctggaacacgccctggaaaaggcggcgcccctgctgagggagatcttcgtc
gactttgccccctttctttctcgaaccctgcttggcagccacggacaggagctgctgatc
gagggcaccagtctggtgtgtatgaagtccagcagctctgtggtggaactggtcatgctt
ctatgttctcaggagtggcagaactccatccagaagaatgctgggcttgccttcatcgag
ctggtcaacgagggaagacttctcagtcataccatgaaggaccacctggttcgtgtggct
aatgaggctgagtttatcctgagtcgacagagggctgaagacatccataaacatgcagaa
tttgagtctctatgtgctcagtatgcagccgagaagcgagacgaggagaaaatgtgcgac
cacttgatccgagcagccaagtacagagaccacatgacgggaacacagctcatccagaag
atagtgaacatactgactgacaaacatggagcctggggaagctcttccttaagccggccg
agggagttctggcgcctggactactgggaggacgatttaaggcggcgacgtcgctttatc
aggaaccccttcggatccagtcactcagaagccacgctcaaagcggcagccgaacacgca
tctgacgaggatatcctcaagggcaagcagtccatcaggaaccaggttctgggaaatcag
aactctgaaagcgagacgtcactggagggagacgatgacactctgtcatctttagaggag
aaggacctggagaacctaacaggcccggtaaacctgagcacgagcgcacatctcgtggct
ccggctgctgttgtgaaaggcaccctgtctgtcaccgcctccgagctcttctttgaggtg
gatgaggacgagcccagcttcaaggccctcgatccaaagattttagcctacactgaaggg
cttcatggaaaatggctcttcacagagatccgagctgtcttttccagacgctacctgctg
caaaatactgcgctggaggtgttcatggccaacagaacggctgtcttgttcaacttcccc
gatgcagccacagtgaaaaaggtggttcactgccttcctcgtgttggtgtgggcaccaat
tttggccttccacagaccagacgcatctctttagctacacccaagcagctcttcaaggct
tcaaacatgactcaacgctggcagcgccgtgagatatccaacttcgagtatctgatgttt
cttaacaccatctccggccgcaccttcaacgacctgaaccagtacccagttttcccctgg
gtcatcaccaactatgactcggaggaactggacctcactttgcccagcaacttcagagat
ctgtccaagccaattggagccctgaaccctaagagggcagcattcttctcagaccgctac
gagtcatgggaggatgatcaggtgcccaagttccactatgggacacactactccacctcc
agcttcaccttgatgtggctgctccgcatcgagccgttcaccacatttttcctcaacttc
caaggagggaaatttgaccacgccgatcgcaccttctcatcagtgtccagagcgtggagg
aactgccagagagacacgtctgacgtgaaggagctgatcccagagttctactatctgcct
gagatgtttgtcaacagcaacaattacaatctgggagtgatggaggatggcactgtcgtg
tctgacgtggttcttccgccttgggccaaaagtccagaagagtttgtgcggatcaataga
ctggccctggagagcgaattcgtgtcctgccaacttcaccagtggatcgacttgattttc
ggctacaagcagcagggaccagaggccactcgagccctcaatgtttattactatctgacg
tacgaaggtgccgtcaacctcagctccatcaatgaccccttgctgagagaggccgtggag
tctcagatcaggagctttggacagactccctgccaattactgattgagccacacccaccc
cgaagctccgccatgcaagtgtatcttctcctgcagactccaatgatgttcacggagcag
atgcagcaagatgtcatcatggtgctgaagttcccgtccaattctcctgtcacatacgta
gcagccaacacgcagccgggtctcgcttcagctgccatcatcaccgtcaccgccaaccgc
ctctttgccgtcaacaaatggcatggcttgacaggtcatcagagctccgcagagcagcag
taccaacttcctgtggaaattgaccctctgatagccagtaacgtgggcactcacagacgc
cagatctctgacctgctggatcagagcattcacatcagctcccagtgtttcgtcatcacg
gcagacaaccgcttcatcctcctgtgcggcttctgggacaagagcttccgggtctactcc
accgacacggggaaactaactcagattgtgttcgggcatcgcgacgtggtgacctgcctc
gcccgctccgagtcgtacatcggaggagactgctacatcctgtcgggctccagagatgcc
accctgctgctgtggtactggaacggaaagctctccagcatcggagaaacgccgagcaca
tttaccacgccgagagccatcctgacgggccacgactgcgaggtgacgtgtgccagcgtc
tgtgcagagttggggctggtcatcagtggctgcaaagagggtccttgtctgatccattcc
atgaatggggacctgctgcggaccctggaggggccggacagctgcctgcagccccgactc
atccagtcctccagcgagggtcactgcgtggtttactacgagaagggacacttttgtttg
tttagcgtcaacggcaaactgctgggacacatggaggtggaggacagcatcaaggctatg
cttctcagtcgggatggccagtatttgctgaccggaggggacggaggcgtggtttgtgtc
tggcaggtccacaacctgaagcagctcttcagctacccgggctgtgacgcaggcgtgcgc
tccatggccatgtcacacgaccaaaggtgcatcataacaggcatggcgtctggaagcatc
gtcctcttctacaacgacttcaacaggtggcatcacgagtaccagacccggtactga
DBGET
integrated database retrieval system
