Oryzias melastigma (Indian medaka): 112137224
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Entry
112137224 CDS
T07439
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml00514
Other types of O-glycan biosynthesis
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112137224
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112137224
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112137224
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112137224
Glycosyltransferases [BR:
oml01003
]
O-Glycan biosynthesis
O-linked Gal type
112137224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
MT-A70
Motif
Other DBs
NCBI-GeneID:
112137224
NCBI-ProteinID:
XP_024115180
Ensembl:
ENSOMEG00000005954
LinkDB
All DBs
Position
LG1:522367..544023
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AA seq
667 aa
AA seq
DB search
MVKEASFSVERSVPTGQQQTSPLTTTCFPRNRPAARRLLHPPSLRLSVRGPAVFSAPAML
RVRWLFSALLFVLLPGLSRGYFPEERWSPESPLLAPRVVIALICRNAEHSLPLVLGAIER
LNYPKDRIALWVATDHNIDNTTAILRDWLIQVQKYYHYVEWRPQEEPSRFTDEVGPKHWN
NLRYEHLMKLRQAALNTAHEIWADYLLMTDCDNLLTNQDVLWKLMSENKTIVAPMLESRA
AYSNFWCGMTSQGYYKRTPAYMPIRRQERRGCFAVPMVHSTYLVDLRKEASRYLAFYPPH
EEYNWALDDVIVFAYSARMADVQMHVCNKETYGYLPVPMRAHASLQDEAESFLHTHLEVM
VKAPPLAPSSFLSISPKQPNKMGFDEVFMINLVRRTDRRERMLRSLYEQEISCKVVAAVD
GKALNVSDMESLGIRMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLKTSLVLED
DLRFEVFFKRRLQALLQEVTTHQLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSYWT
LAYILSMRGAQKLLRAEPLSKMLPVDEFLPVMYDKHPVSEYMEHFEKRDLHAFSAEPLLV
YPTHYTGEPGYISDTETSVVWDNETLKTDWDRAKSRKTHEQGELSFEAQNSDVLQSELEN
WSARDEL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaagcgagtttctctgtagaacggagtgttccgacaggacagcagcagacc
tcccctttaacaacgacctgctttccgcggaacagaccagcggcccgtcggctcctccat
cctccgtctctccgtctgtctgtccgcggtccagctgtgttttctgcccctgccatgctc
cgggtccgctggctcttctctgccctgctgttcgttctgcttccgggcctgagccggggg
tatttccccgaggaacgctggagccccgagtcccctctgctcgctccgcgggtcgtcatc
gcgctcatctgccgcaacgcggagcactctctgccgctggtcctcggagctatcgagcgg
ctcaactacccgaaggaccgcatagcgctgtgggtggcgacagatcacaacattgataac
acgacagccattctcagggactggctcatccaagtgcagaagtactatcactatgtggag
tggagaccccaagaggaacccagtcgctttacggatgaggtggggccaaagcactggaat
aatcttcgttatgaacacctaatgaagctccgtcaggcagcactgaacaccgcccatgaa
atatgggcggactacctcctgatgactgactgtgacaacctgctcaccaatcaggatgtg
ttatggaagctgatgagcgagaacaagactattgtggctcctatgctggagtctagagct
gcatactccaacttctggtgcggcatgacttcacagggttactacaagcgtactcccgcc
tacatgcccatccgcaggcaggagcgcagaggctgtttcgctgtaccgatggttcactct
acctacctggtagacctccgaaaagaagcctcccgttatctagctttctatccaccgcac
gaggagtacaactgggccttggatgatgtcatcgtctttgcctactctgctcgtatggca
gatgtgcagatgcacgtttgcaacaaagaaacctatggctatttgcccgtcccaatgcgg
gcccatgccagcctgcaggatgaggccgagagctttctacacactcacctggaagtcatg
gtgaaggctccgcctttagcgccttctagcttcctgtccatctctccaaagcagcccaac
aagatgggctttgatgaggttttcatgattaatctggtgcggaggaccgaccgtcgtgag
cggatgttaaggagcctgtacgagcaggagatcagctgtaaggttgttgctgctgtggat
ggcaaagctctgaatgtctctgacatggagtctctggggatcaggatgctgcccgggtac
aaagacccgtatcacggccggcctctcaccaagggggaactgggttgtttcttgtctcat
tacaacatttggaaggagattgtggatcggggtctaaagacttctttggtgcttgaggat
gatctccgcttcgaggtgtttttcaaacgccgtcttcaggctctgctgcaggaagtcacc
acgcaccagttggactgggacctgatctacataggtcggaagcggatgcaggtggaccac
ccggagaagtcagttccaaacattcacaacctggtggaggccgattattcctactggact
ctggcctacatcttgtccatgcgaggagcacagaagctgctgcgggccgagcctctgagt
aagatgcttcccgttgacgagttccttcctgtgatgtacgacaaacatccagtttcggag
tacatggagcactttgagaagcgggacctacacgccttctctgcagagccgcttctagtg
tatccgacccattacaccggagagcccgggtacataagcgacacggagacctcggtcgtc
tgggacaacgagacgctgaaaacagactgggaccgagccaagtccaggaagacgcacgag
caaggggagctgagcttcgaggctcaaaactcagatgtgctgcagtcagaactggagaac
tggagcgcacgggacgaactgtga
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