Oryzias melastigma (Indian medaka): 112137239
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Entry
112137239 CDS
T07439
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112137239 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112137239 (sart1)
04121 Ubiquitin system [BR:
oml04121
]
112137239 (sart1)
Spliceosome [BR:
oml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112137239 (sart1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112137239 (sart1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
112137239
NCBI-ProteinID:
XP_024115213
Ensembl:
ENSOMEG00000002508
LinkDB
All DBs
Position
LG1:13944622..13947851
Genome browser
AA seq
763 aa
AA seq
DB search
MGSSKKHKEKSREETEDRRREHKKHRHKERDRDTSDRDKDKRKRSRSRERGRRDSRGKGE
RTSGEPRVKREKVDLGYQESKAEPQPQSASGDASLSIEETNKLRAKLGLKPLDLNENKKE
VGTKEDPMVAETINPIVIQQQKEMREKLAAMKEKRLLNKKLGKVKTLAEDDWLDDTAAWV
EKNRKMAKEKEMAEKRAKLLEEMDQEFGVSNLVEEEFAQSKQEAYSSRDLKGLKVQHKLE
SFSEGQSVILTLQDKGVLEEEEDVLVNVGLIDKEKAEKNVELKKKKPDYKPYQEEESVED
MVTFKNRSVLSKYDEEIEGEKKQSFRLSTGGFADGQRERDLQSVREALRNQAQSLQMPVL
NIASEYYTPQEMVGFKKTKRRVKKIRKKEKSAIDILPDDTRSTDFGSRTRGRGRKNDDDV
TEVMEDARCAIETPHESDDIRMAEMDMSDDENFIPPEPVTIEEDEAEQELQKQLEKQRKL
KQKQLLKDSGEKVVEKIRGLIKSDDDNDPEKKNIVFNATSEFCRTLGDIPTYGLSGNRED
QEDIMDFEQEEEKDDAGGSDSEIDDNIGWSSVNLDEEQKPSDFSTASATILDEEPIVNSG
LAAALKLCTNKGLLDTQMQKVARVRATKGSLPNDNYCIEDKMGFDDKYSRREEYRGFTQD
FKEKDGYKPEIKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLEEEALLK
KMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNVNNITK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttcgaagaaacacaaggagaagagccgcgaggagactgaagaccgtcgccgt
gagcacaagaaacatcgacacaaggaacgagacagagacacctcggatcgtgataaagac
aagcgaaaacgatccagatcaagagaaaggggcaggcgggacagccgaggtaaaggcgaa
agaaccagcggggagccgcgagtgaagagggagaaagttgaccttggataccaggaaagt
aaggccgaaccgcagcctcagagcgcaagcggggatgcgtctctcagcatcgaggaaaca
aacaagctcagagccaagctcggcctgaaacctctggatttgaatgaaaacaagaaagaa
gttgggaccaaggaagacccaatggtcgcagaaaccatcaacccaattgtgatccaacag
cagaaagagatgagagagaagcttgcagctatgaaagaaaaacgtcttctcaacaagaaa
ctgggtaaagtaaaaaccctggctgaggacgactggttggacgacacagccgcttgggtg
gagaaaaaccggaagatggctaaagaaaaagaaatggcagagaaaagagccaaacttctg
gaagaaatggatcaagagtttggggtcagcaatcttgtagaggaggagtttgctcaaagt
aaacaagaagcatattcatctcgtgatctgaaaggtctcaaagtgcagcacaagttggaa
tctttcagtgaaggtcagagcgtcattctgaccttacaggacaaaggtgtactcgaagag
gaagaagatgtccttgtaaacgtggggctgattgacaaagaaaaggcagaaaagaatgtg
gagttgaagaagaagaagccagattacaagccctaccaagaagaggaaagcgtggaagac
atggtcacgttcaagaaccgctctgtgctgtcaaaatacgacgaggaaattgaaggagaa
aagaaacagagtttccgattgagcacaggtggctttgcggatgggcagcgagaaagggac
ctgcagtctgtcagagaagctctgcgaaaccaagcccagtccctgcaaatgcccgtcctc
aacattgcatcagaatattacacacctcaggaaatggtgggcttcaagaagacaaaacgc
cgtgtgaaaaagatccggaagaaggagaaatctgctattgatatactgcctgacgacact
cgcagtactgattttggctccagaacgcgaggaaggggccgcaaaaacgacgacgatgtg
acggaagtaatggaggatgccaggtgtgcgattgaaaccccccatgagtcagatgacatc
aggatggcagaaatggacatgagcgatgatgaaaatttcatcccgcccgagccagtcaca
attgaggaggacgaggcagaacaagaactacagaaacaactggagaagcagaggaaactg
aagcaaaagcagcttctaaaggactctggcgagaaggttgttgagaagattaggggcctc
attaaaagtgatgacgacaacgatccagagaagaaaaacatagttttcaatgccacctca
gagttttgcagaactttgggtgatattcccacgtatggcctgtcaggtaaccgagaggac
caagaagatattatggactttgagcaggaggaagaaaaagacgatgctggaggatcagac
tctgaaattgatgacaatattggatggagctcagttaatttggatgaggaacaaaaacca
tcagacttttccacagcctctgcaactattttggatgaagaacccattgtcaactcaggc
cttgcagcagccttaaagctgtgcacgaataaaggcttgttggacactcaaatgcaaaaa
gtggctcgtgttagagcaacaaagggctccctgcccaacgacaactattgcatcgaagac
aagatgggctttgatgacaagtacagtcgcagagaagaataccggggtttcacacaggat
ttcaaggagaaagatgggtacaagcccgagatcaagattgagtacgtggatgagtctggc
cgaaaactcactccaaaagaagctttcagacagctttcccatcgatttcatgggaaggga
tctgggaagatgaaaacagaaaggaggatgaaaaagcttgaggaggaagcgctgctgaag
aagatgagcagcagtgacacacctcttgggactgtggctttgcttcaggagaaacagaaa
tcccagaaaaccccatacattgtgcttagtggaagcgggaaaagtatgaatgttaacaac
atcacaaaataa
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integrated database retrieval system
