Oryzias melastigma (Indian medaka): 112137261
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Entry
112137261 CDS
T07439
Name
(RefSeq) POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112137261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112137261
03021 Transcription machinery [BR:
oml03021
]
112137261
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112137261
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
112137261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112137261
NCBI-ProteinID:
XP_024115260
Ensembl:
ENSOMEG00000017387
LinkDB
All DBs
Position
LG11:13312337..13373610
Genome browser
AA seq
742 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRSSPDIKMAKASGEEKPGVDYPGDSSDSDRN
SPDEQVQTIKSSPYSLSPSSTGTKGKSEERSEMTHGIAPPSQQQQQQAQHHHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAQAAAQQQANQQQNQTQSQP
QQQSQQTKQEQAVQAAPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQFLLSQ
PTQAQQQQQGLLSTPNLIQLPQQSAAGLITTPPRMGLQAQRDKISDAGSSGGGGGSAAVP
GGSSSVVTSAGATSASSSAMAASLSSSLTPAGQGPHMGEEPSDLEELEQFARTFKQRRIK
LGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVDSM
LPSPSSISSPLLGIEGLPGRRRKKRTSIETNVRVVLERNFSTNQKPTSEEILLMAEQLNM
EKEVIRVWFCNRRQKEKRINPSSSTTPPLPSQTSPVVTHKAPCYSPHMISSQGLSQVTTS
LSTTGATPSPSASCPMTPVSSATISSSVTPPPHSTASPAPPSFGSSGLNTGNTMMGVSTG
MNQALIGSNPLATMQALAASGGQLPLSSLEGGQGHILLGGPGGAAVSPSLRPSLFLNRPG
LLPMVTGSMATTSTPTMGLVSSSAGSGCGLRPSFCQSPPTGTSNLMSPTLCPEESVSPCS
SPASFCSFSEASPPTLGGTMAD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtgcccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggctccgcggtccagccccgatattaagatggccaaagca
tcaggggaggagaagcctggagtggactacccaggggatagttcagactctgacagaaac
agccctgatgagcaggttcagacgataaaatccagcccctacagcctctcgccctcatca
accggcaccaagggaaagagtgaagagagatccgagatgacgcacggcatcgcgcctccc
tcccagcagcagcagcagcaggctcagcaccaccacacccagctgatgctcgctggcagt
cagctagcagggcttgccgctctccttccggcccagcagcagctgctccttcaacaggct
caggctcagcttttagcggcggccgttcagcagtccaacgccgcccatgccgctcatgcc
gcccaagccgctgcacagcagcaagctaaccagcagcagaaccaaacgcaatcccagccg
cagcagcagtcgcagcagaccaaacaagagcaagcggtgcaggccgctccgccacagctg
gccctctctcagccgatccagctcacagcacaggacatccagcagctgctgcagctccag
cagctggttctgatgcctggtcatcccctccagtctcctgcccaattcctcctgtcgcag
ccgacgcaggctcagcagcaacagcagggtttgctttcaactcccaatctgatccagcta
cctcagcaaagcgcagcaggactgataacaaccccccctcgaatgggactccaagcacag
agagacaagatcagcgatgcgggcagcagcggcggcgggggtgggagtgccgcggttccc
ggtgggagcagcagcgttgtgacatctgctggagccacctctgcatccagcagtgccatg
gccgcctccttatcctccagcctgaccccagcaggtcaggggccccacatgggtgaagag
cccagcgacctggaggagctggagcagttcgcccgcacctttaaacagcgacgcataaag
ctgggattcacgcagggtgatgtcggcgtggccatggggaagctgtacggcaacgacttt
agtcagaccactatctcccgctttgaagctctaaacctgagctttaagaacatgtgcaag
ctgaagccgctgctggagaagtggctgagtgacgcagaaacgatggctgtggacagcatg
ctgcccagcccctcctccatctcctcccccttgctgggcatagagggtctgccaggacgg
cgccggaagaaacgcaccagcatcgagaccaacgtccgagtggtcctggagcgcaacttc
agcacgaaccagaagcccacatcagaggagatcctgctgatggctgagcagctcaacatg
gagaaggaggtgatccgcgtttggttctgcaaccgtcggcagaaggagaagcgcatcaac
ccgtccagcagcaccacccctcctctgcccagccagacttcgcctgtcgtgacgcacaaa
gccccctgctacagcccacacatgatatcgagtcagggtctgtcccaggtcaccaccagc
ctcagcacaacaggcgccaccccctcaccttcagcatcctgccccatgactcctgtcagc
tcagccaccatctcctcttctgtgactccgcctcctcatagcacagccagcccggccccg
cccagctttggtagctcagggctcaacactgggaacacaatgatgggagtaagcacaggg
atgaaccaggccctcattggcagtaatcccctggctaccatgcaagcgctggcagccagt
ggcgggcagctgcctctctccagtcttgaagggggtcagggtcacatccttctaggcgga
cctgggggcgccgctgtttccccttctcttcgcccctctctcttcctcaaccgccccggc
ctcctgcccatggtgaccggctccatggcgacaacctccacgcccaccatggggttggtc
agcagcagcgccggcagtgggtgtggcctgaggccctctttttgccagtctccgcccact
ggcaccagcaacctcatgagccccactctgtgcccggaggagtcggtatccccttgttca
agccccgcctctttctgttccttcagcgaagcttcgccacccaccttgggcgggaccatg
gccgactga
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