Oryzias melastigma (Indian medaka): 112137367
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Entry
112137367 CDS
T07439
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X2
KO
K06532
prominin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112137367 (prom1b)
04090 CD molecules [BR:
oml04090
]
112137367 (prom1b)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112137367 (prom1b)
CD molecules [BR:
oml04090
]
Proteins
112137367 (prom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Claudin_2
DUF996
Motif
Other DBs
NCBI-GeneID:
112137367
NCBI-ProteinID:
XP_024115429
Ensembl:
ENSOMEG00000002751
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Position
LG1:14138082..14168675
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AA seq
876 aa
AA seq
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MLWIRWLVLLLCWGAASGEERAAEEEDEARTEVLSDSPRRRSPPPVEPLDFGFVPSAIYD
THAYYEPGSISILFHMVHAFLYVVQPNPFPKDLIVRVIQQNMGGIKLEEWRKPENVVLLL
QWIHYEAGFLICTIIGIVFVVLTPVIATCFCMCRCCDNCGGEMHQRQRKNADCHRGFFTA
SLIATTIFIILGVFVAYAANHNISSQIRNTRRLINTNMRDLKTFANNTPAQIEYLTGQYT
TAKNKVMSDLDNIGPLLGSRIHVHLEKEVVPALDSALRMAGAKIENSIKAMRETKEALEN
VSSSLEILQEGIGKLQASLSEERASLSNTLSDPACTNGAVSPTCNTIRSTLPQLGINADY
SKLPNVGHALANVNTVLRIDLSNIVQRGYASFNDTPKLVKEQTRNIVTALPRVKGMLDKI
GAEITAFSKMFPVEASLSNFTNFLNERHRSIEAFYPQIDQMDFYRWIACVAVLCTIVLIL
AFNILGLLCGSCGYDKQATPTTRGCMSNTGGNLLMAGVGFSFIFSWALMAVVTTLFAVSG
NMEKLICEPLANRQLFKIIDTPFLVHPEKKNFLPGMLFQNPNIDLTLGSVYRECYDNNGL
YHALQLETMFNINSFLNRTVYNKDLAKLFESVKVDLKDITLLEQAGRDNLMNFANSGIGQ
IDYAAFLSEVNKGVTLVDLLSFCADLEDQADQLPRGALENALKGHASSIRTIHREQVVAL
EQAMKYVRARSTLSQSIKLLQKTSDDLPVKVTNILSAIDAAEYLIVHNASFVVKQETKNF
MQGLEGYFKQYTGWVKSSLTSEVAQCKPISNMVDSMEIVGCSFIVDSVNTFWFGLGGCCI
LLIPSIIFSIKLAKYYRRMDTEDVFEDYSYPWLVAL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggataaggtggctcgttctgctgctctgctggggggctgccagcggcgaggag
cgggcggcggaggaggaggacgaagcccggactgaggtgctgtcggactcccccagaagg
cgctcccctccgccggtggagccgctggactttgggtttgtcccatcggcgatatatgat
acccatgcttactacgagccagggagcataagcatccttttccacatggtccacgcgttt
ctttatgtcgttcaacccaatcctttccccaaagatcttattgtcagagtcattcagcaa
aacatgggaggaattaaactggaagagtggagaaagccagaaaacgttgtgctattgcta
cagtggatccactatgaagctggattcctaatatgtacgatcattggcatcgtgtttgtg
gtcctgactcccgtcatagccacgtgtttctgcatgtgtcgatgctgcgataactgtgga
ggcgagatgcatcagaggcagaggaaaaatgcagactgccaccgaggtttcttcaccgcc
tcactcatcgccaccaccatcttcatcattctgggggtgtttgtcgcatatgctgccaat
cacaacatcagctctcaaatcagaaacactcggcgactcatcaacaccaacatgagagat
ttgaagacctttgccaacaacactcctgcgcaaatcgaatacctgacaggccagtacacc
acggcaaagaacaaagtcatgtcagaccttgacaacattggacctttacttgggagtagg
atccacgttcatctggaaaaagaagtggttcctgctctggacagtgctctgcgcatggcg
ggagcaaaaattgagaattccatcaaagccatgcgggagactaaagaagccttggagaac
gtcagctcctcattggaaattcttcaggaaggaataggaaaacttcaggcgagtctatct
gaggagcgcgcttctctgtccaacactctgtctgaccccgcatgcaccaacggagccgtg
tcacccacctgtaacaccatccgttccactctgcctcagcttggaatcaatgccgactac
tccaagcttcctaatgttggtcacgctttagccaatgtcaatactgttttgagaatagac
ctcagcaacatcgttcaaaggggttatgcatctttcaatgacactccaaagctggtcaaa
gaacaaaccagaaacatcgttactgctttacctcgagtgaaaggcatgctggataagatt
ggtgcagagatcactgccttctccaagatgttcccagtggaagcctcactttccaatttc
actaacttcctcaatgaaagacaccggagcattgaggcattttacccacagattgaccaa
atggatttttacaggtggattgcttgtgtagcagtgctctgcactattgttttgatcctg
gccttcaacatcctcggcctgctctgtggctcctgcggctacgacaagcaggccacccca
acaacccgcggctgcatgtcaaacactggagggaatctgctgatggctggagtgggcttc
tccttcatcttttcctgggcactgatggctgttgttacaaccctgtttgctgttagtgga
aacatggagaagctcatatgtgaacctctggctaacaggcagcttttcaagatcatagac
acaccattcctggtccatcctgaaaagaagaactttcttcctgggatgctcttccaaaat
ccaaatattgacttgactttgggtagtgtctacagggagtgctatgacaacaacggcctg
taccacgctctgcagctggaaaccatgttcaacatcaactccttcctcaatagaactgtg
tacaacaaggatctggccaaactgtttgaaagtgtgaaagtggacctgaaagacatcacc
ctgctggagcaggcaggcagagacaacctgatgaactttgccaactctggaataggacag
atcgactatgcagctttcctttctgaggtaaataaaggagttactcttgtggatctgttg
tctttctgcgctgatctggaggatcaggctgaccagttgccacgtggcgctctggagaat
gccctgaaaggtcacgccagcagcatcagaaccattcacagagaacaggtggtggctttg
gagcaagccatgaaatatgtcagagcgcggagcaccctgagccagagtatcaagctgctg
cagaagacctcagatgacctaccagtgaaagtgacaaacatcctgagcgccattgatgca
gcagagtatctcatcgttcataacgcttcctttgtggttaagcaggaaacgaaaaacttc
atgcaaggcttagagggatatttcaaacagtacacaggatgggttaaaagctctctaaca
tcagaggtggctcagtgcaagcccatcagcaacatggtggacagtatggagatagttggc
tgcagcttcatcgtggactcagtgaacaccttctggtttggtctgggaggctgctgcatc
cttctcatccccagcatcatcttctccattaaactggccaagtactacagaagaatggac
actgaagacgtgtttgaagattactcttacccatggcttgttgctctgtga
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