Oryzias melastigma (Indian medaka): 112137369
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Entry
112137369 CDS
T07439
Symbol
sdk1a
Name
(RefSeq) protein sidekick-1
KO
K16353
protein sidekick
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112137369 (sdk1a)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Other
112137369 (sdk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_Rha78A_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
112137369
NCBI-ProteinID:
XP_024115436
Ensembl:
ENSOMEG00000022171
LinkDB
All DBs
Position
LG1:complement(12221046..12495254)
Genome browser
AA seq
2184 aa
AA seq
DB search
MKPRGTRREPRVRAEEAPARGTHVRMSTGTARSGSRRLFLHLLLLLGTSCHMLHGQEVAP
YLQGVGRAQQVVLEGNRLVLTCPAGGSWPLHYRWTLNNSNITDWTLQNRLSISSLKRSDA
GLYQCMVRNRMGALIHRKTEVHVAFLGNFSGKEQRNTVSQGRAAVISPPPLASFPQPLIT
WYKDGHKIIPNNRIAVTLDNQLVVLATTASDAGGYHAEALNEMTGENVTSPTVYLSISVA
KKNRGSTDSESELVAPTIVIGPKNTTVVVGQGATLECIANARPVDGLTVSWKRDGRWLAT
GRQLVIPSPAFSDTGLYVCEALLSNSTAKPIEAKAHLTVMEPPLLTVQPKSKIFADLDKN
VDIPCQASGVPLPRIEWYKDAVPLSKLANPRYRVNTATGLTVRRVQPGDGGIFQCFARSS
AGETQAHTELLVSSVGPIFRFPPSDQTVTEGDTVVFACENSGAPKPAITWRKGLQIVASG
SVQVPRFTLLQSGGLQIKPVSFQDSGQFTCIASNSEGSINATAALTVWRRTFLSVPPADL
RVIKGTTAVLECNATHDSRINISFKWDRGGVPVLPSGGGRVSVRQGSLSIGQTWSGDIGD
YTCTVTSQAGNDSHTARLEVIELPHSPRSLTARLNDSDSRSVLLSWLRPFDGNSPLLYYV
LELSENNSPWKVYLSEVDPSVTEVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLR
EEAPSAPPKNIVASGRTNQSIMVQWQPPPEPELNGVLRGYVLRYRLAGLPGDYQEKNISS
PETNYCLLKDLIIWTQYQIQVAAFTGAGLGVYSSPVTEYTLQGVPTAPPQEVEVVALNST
TIRFTWNPPPQQFINGINQGYKLMVWPEQSPEDMKTVTITPDYPSLRHTGLVSGLKKFTW
YYGSTLCFTTPGDGPRSPPTLLQTHEDTPGPVHQLSFTEILDTTVRVSWAEPKEKNGIVT
GYTLWWEVPGIESSLVERSLSNSTLQYRLTGLNSTTKYTIQVAALTAAGQGVVTSSTIST
GVPPELPGAPSNLVISNISPRKASLKFRPGPDGKTTISRWIVEAQVVKEDGKEDPWRVVY
EENHPDADTLEIPNLTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDTHPSNLRLV
SATQTSLRFSWKPLPASEYNSSPETVGYRLRVRRTDGQGKDRTQDVQGGVNSTDATVEAL
SPWTQYHIQIQSFNSIGAGPWSSTVEARTAESAPSGSPVNVTAEAVSSSKIMLTWSALPQ
TQRNGVILGYKVMYSEKDLEDPPSVLVVQGEGNLTVLLGALQKYTVYVLQVLAFTRIGDG
PLSNPVLLRTKEDAPGPPVRMLFPEVRLTSVRVVWQPPALPNGIILGYQISYRLDRKDPQ
RWTTVEVGSNARQFTVTGLLSEQTYVFHLTARTAVGWGDRQEALVVTTERRERPQPPKKL
AAPQDEVEARRLHLYWGISGSGSSPLRYFTLQLRELPNGTWKTHTTNIPHNVTSWTVDRL
KPFSSYKFRMVATNDVGDSLFSKETDAVTTLQDVPNEPPVILSVKPTTTTSVLVQWKRPK
EESINGVLAGYRLYYRELPANASSFLQTEVQTTKNTTSALITAKSTFKTVSSASLTEFEL
TQLKRFTRYQIVMTSYNIIGESPPSTAVEVSVGEAAPSVAPQSIKVSAVSPTSLEVTWDM
PPPETQNGLIQGYKVHYWERDKQNQTEKVKVIFVPETRVHLHNLTSYTPYLVTLTAFNTA
GDGPPSDPRGARTRQSAPSQPSFLSFSEVTGGSVNVSWGPPLTPNGQVEGYRVMYQPTAP
VQGVSKVVTVDVKGSWQRWLKVRDLIKGATYTFSVQALTISHGPPVRANISAQPVKGSPG
SPVEVSITKTSSALTLHWSEGDNGAAPVTGYVIEARSSDEGVWDSFIRHLPQSSRSASVP
LERLRSGISYEFRVIALNRFGYGQPSTPSAALAALSERPFYEEWWFLLVMALVGLILILV
LVFTLLLHGHSSKYKACGSGKHITAGEESVTLDNGGFAALELNSRTLNTKNSFLKKNGTR
SPPRPSPGGLHYSDEDICNNYNGAVLTESTTLTEKPTEASESELTDSDYEDEQPKHSFVN
HYMSDPTYYNSWKRQPKGLKGIGSSFGYEECATADTEPYYQTVVTQHSTGGAYTPTGQPA
HTHVNPNTNPPGSRTPVTGFSSFV
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcgaggtacccggagagaaccccgcgtgcgcgcggaggaagcccccgcgcgg
ggcacgcacgtgcggatgagcaccgggacggcccgtagcgggagccggcgactgtttctt
cacctcctgctcctcctcggcaccagctgccacatgttgcacggtcaagaagtggctccc
tacttacaaggggttgggcgggcgcagcaggtggtgctggaaggaaacagactggtgctg
acctgcccagctggaggcagctggcctctgcactaccgctggactcttaacaacagcaac
atcaccgactggacattacagaacaggttgtctatttcatccttgaagaggagtgatgcc
ggtctgtatcagtgtatggtgagaaacaggatgggagcactaatacacaggaagacagaa
gtgcatgtggcctttttggggaatttctccggtaaggagcagagaaacactgtgagtcaa
ggccgagccgccgtcatcagcccacctcctcttgcttcttttcctcaacccctgatcaca
tggtataaagatggacacaaaatcatccccaacaaccgaatagcagtcactttggacaat
cagctcgttgtcttggcaaccactgcatcggatgctggaggctatcacgccgaagcgctg
aatgagatgacaggggagaatgtgacaagccccactgtctacctgagcatttcagttgcc
aagaaaaaccgcgggtcaacagattctgagtcagagctcgtggctccaacaatcgtgatt
ggtcctaagaacacaacagttgtggtggggcagggggccactctggagtgcattgccaac
gccagaccagttgatggccttacggtttcatggaaacgtgatgggcgttggctggccacc
gggcgtcagctcgttattccttccccagccttttccgacacagggttatatgtttgtgaa
gcactgcttagcaacagcactgccaaacctattgaagcaaaggcacacctcactgtcatg
gaaccacctttgctgactgttcaacccaaaagtaaaatatttgcggatctggacaagaat
gtagacatcccatgtcaagcctcaggtgtgcccctgccccggatagagtggtataaggac
gccgtccctctctccaaactggccaatcctcgctacagagtcaacacagccaccgggctg
acagtacgcagggtgcagccaggagacggaggaatattccagtgctttgctcgcagctct
gcaggggagactcaagcgcacacagagctccttgtctccagtgtgggccccatatttaga
ttcccaccttctgaccaaactgtaactgagggagacacggttgtgttcgcctgtgagaac
agcggagctcccaaaccggctattacctggaggaaaggtttacagattgtcgctagcggt
tctgtacaggttcccagattcacactgctgcagtctggtggcttgcagattaaaccagtc
agtttccaggattcaggacagttcacctgcatcgcgtccaactcagagggaagcatcaat
gctaccgctgccctcaccgtctggagacgcacgttcctctctgtgcccccagcagacctg
cgtgtgattaaaggaaccactgcagttcttgaatgcaacgccacccatgactccagaatc
aatattagcttcaagtgggatcgtggtggtgtgccagttcttccaagcggcggtgggcgt
gtctctgtgcgccagggctcactctctattgggcagacttggtcaggtgacatcggggac
tacacctgcactgtgacatcacaggctggcaatgactcccacactgcacgccttgaagtc
atcgagctgccacattcccctcgctccctgacggctcgtctgaacgattccgactcccgc
tccgtcctcctgtcctggctgcgccccttcgacgggaactcccccctcctgtactacgtg
ttggagctctctgagaacaattctccatggaaagtttacttatctgaggttgacccttca
gtgaccgaggtatccgtcggcgggctcacgcctgccagaacctaccaattcaggctctgt
gctgtcaatcaagttggcaggggtcagtacagcgctgaaacgcagagattgatgctgcgt
gaggaggcccccagtgcaccgccaaagaacattgttgccagtggtcgcacaaaccagtcc
attatggttcagtggcagcctcctccagaaccagagctgaacggggtccttcgaggttat
gtactcagatatcgcctggccggcctgccgggggactaccaggagaagaacatcagcagc
ccggaaacaaactactgtctgctgaaagatctcatcatctggactcagtaccagatccag
gtggcagccttcaccggagctggtttgggggtctacagcagtcctgtcactgagtacacg
ctgcaaggagttcccacggcacctccgcaggaagtggaagttgttgcacttaattcaaca
accattcgcttcacgtggaaccctccgccacaacagttcatcaacggcatcaaccaggga
tacaagctgatggtctggcccgagcagtctccagaggacatgaagacagtaaccatcact
ccagactaccccagtttgcggcacacaggactagtgtccgggttgaaaaagtttacctgg
tactatggctccaccctctgcttcaccacacctggggatggtcctcgcagcccccccacc
ctcctgcagacacatgaagacacacctggaccagtccaccagcttagcttcactgaaatt
ttggacactactgttcgagtcagctgggcggagcctaaggagaagaatggaatcgtcact
ggctacacattgtggtgggaagtacctggcattgagtcgagtcttgtggagcggtccttg
tccaactccaccctgcagtaccggctgacaggcctgaactccaccaccaagtacacaatc
caagtggccgcactcacagcagcagggcagggcgtggtcacatcctccaccatctccact
ggagttccaccagaacttcctggtgccccttctaacttggtcatctccaacatcagccct
cgtaaagcatctcttaaattcagacctggtcctgatgggaagaccaccatatcgagatgg
atagtagaagcccaggttgtaaaggaggacggtaaagaggacccatggagagtcgtttac
gaggagaaccatccggacgcagacacattagaaatccccaacctgactccattcactcag
tacaggttcaggatgcagcaggtgaacattgttggttctagtcccatgagcgccccctct
aggctgattcaaacactacaggctgcccctgacacacacccgtccaacctccgccttgtg
tcagcaacacagaccagcctacgtttcagctggaagcctcttccagcatctgaatacaac
agcagcccagaaacggtggggtacaggctgcgtgtgcggaggacagatggtcaggggaag
gacagaacacaggatgtgcagggtggagtaaacagcactgatgccactgtggaggccctg
agtccctggacccagtaccacattcaaatacaaagcttcaactcaataggagcgggaccg
tggagcagcactgttgaagcacgcacagccgaatctgctccgtctggatcacctgtgaat
gtaactgctgaggcagtgagttcctccaagatcatgctcacctggtctgctcttcctcag
acacaaaggaacggagtcatccttgggtataaggtgatgtacagtgaaaaagacctagaa
gatcctccttctgtgctggtggtacaaggagaaggaaatttgaccgtcctacttggagct
ctccaaaagtacacagtgtacgtgctgcaagtgttagcgtttacacgtattggtgatggg
cctctcagcaacccagttctgctcagaaccaaagaagatgctccaggccctcctgttcgc
atgttgtttccagaagttcgactgacatcagttagggtggtctggcaacccccagcgctc
cccaacggcatcatattaggctaccagatatcctaccgcctggaccgtaaggatcctcag
cgatggaccacggttgaagtgggttccaacgctcgccagttcaccgtcacgggacttttg
tctgagcagacctacgtgttccatcttacggctcgaaccgccgtgggctggggcgatcga
caggaggccctggtggttaccactgagcgcagagagcgtcctcaaccacccaagaagttg
gccgccccccaggatgaggttgaagctcgccgacttcacctgtactggggaatcagtggt
tcaggctcctcccctctgagatacttcactctgcagctcagggaactacccaacgggact
tggaagacccacaccaccaacatcccgcacaatgtgacctcctggactgtggacagactg
aagcccttctcctcatacaagtttcggatggtggccaccaatgatgttggagacagcctc
ttcagcaaggagacagatgctgttacgactctgcaggacgttcctaatgagcctccagtg
atcctctcagtaaaaccgacgacaactacttcagtgctggtccagtggaagcgtcccaag
gaagaaagtatcaacggggttttggctggatacagactgtattacagagagcttccagca
aacgcatccagtttcctacagacagaagtgcaaacaaccaaaaacaccacaagtgccctc
attacagccaagagcacctttaagaccgtcagcagtgcctcactcacagagtttgaattg
acacaactaaagaggttcactcgctatcagattgttatgacaagctacaacatcatcgga
gaaagccccccatccactgcagtggaggtgtctgtgggagaagctgctccatcggtggcg
cctcagtctatcaaagtgtcagcggtgtctcccaccagcctggaagtgacttgggacatg
cccccccctgagacccagaatggactcatccaaggatataaggttcactactgggagaga
gacaagcagaaccagactgaaaaagtgaaagtgatttttgtcccagaaacccgtgtgcac
ctccacaacctgaccagctacacaccttatctggttaccctgaccgccttcaacaccgct
ggagacggaccgccgagcgacccccgtggggctcggacccggcagtctgctcccagccaa
ccgagcttcctgtccttctctgaagtgacaggaggaagtgtcaacgtgtcctgggggccc
ccgctcacccctaatggacaagtggagggctatcgggtcatgtatcagcccactgcgcct
gtgcaaggagtgagtaaagtggtgacggtggatgtgaaaggcagctggcaacgatggctg
aaggttcgggatttgatcaaaggagcaacatacacgttcagcgttcaggctctcacaatc
agccatgggcctccagtacgagcaaacatcagcgctcagcctgtgaaaggctcccccggg
tcgcctgtggaggtttccatcactaagacgtcctctgccctcaccctccactggtcagag
ggtgataacggcgccgctcctgtgactggatacgtgattgaggctcgttcctcagacgag
ggagtgtgggactccttcatcagacatcttcctcagagcagcaggtctgcctccgtgccg
ctggagcgcctgaggtcagggattagctacgagtttcgagttattgctcttaatcgcttt
ggctacggacagccgagtacgccctctgctgctctcgcagctctgtcagagcgtcctttt
tatgaggagtggtggtttctgctggtcatggctctggtggggctaatcctcattctggtc
ctggtcttcactctgctgctgcatggacacagcagcaagtacaaagcctgtggctcaggt
aaacacataacagcaggagaggaatcggtcacactcgacaacgggggcttcgctgctctg
gagctgaacagcaggacgcttaacaccaagaactccttcctgaaaaagaacgggaccagg
tctcctcccaggcccagtccaggaggccttcactactctgatgaggacatctgtaacaac
tataatggggctgtgctcacagagagcaccacgctcacagagaagcccaccgaggcctct
gagtcagagttaacagacagcgactatgaggacgagcagccaaagcactcctttgtgaac
cactacatgagcgaccccacctactacaactcctggaagcggcagcccaaaggtctgaag
gggatcggctcctctttcggctacgaggagtgcgccactgcagacactgagccctactac
cagaccgttgtgacccagcacagcacaggtggagcgtacacgcccacagggcagcccgct
cacacgcacgtcaaccccaacaccaacccgccagggtcccgcacgcctgtgacgggattc
tcctcctttgtttga
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