Oryzias melastigma (Indian medaka): 112137375
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Entry
112137375 CDS
T07439
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
oml04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112137375 (smc3)
04114 Oocyte meiosis
112137375 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112137375 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112137375 (smc3)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112137375 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
112137375 (smc3)
Proteoglycans [BR:
oml00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
112137375 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
MFD_D3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
112137375
NCBI-ProteinID:
XP_024115444
Ensembl:
ENSOMEG00000006841
LinkDB
All DBs
Position
LG1:1111033..1143724
Genome browser
AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
EVTTKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELTELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKETLARSEDLDSLIDKTEAEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEEGGADSERGS
GSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
TAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaacaggtgattattcaagggttccgaagttacagggaccaaactgttgtt
gatccattcagcccgaagcacaatgtcatcgttggaagaaatgggtctggaaaaagtaac
tttttctacgccatccagttcgtcctcagtgatgagttcagtcacctgcggcctgaacag
cgcctggcccttctccatgaaggaactggtccacgtgtcatttcagcttttgtggaaatt
atttttgacaactctgataatcggctgccgattgacaaagaggaagtctctcttcgccgt
gtcattggtgcaaagaaggaccagtatttcttggacaagaagatggtgactaagaatgac
gtcatgaaccttctggaaagcgccggcttctctcgcagtaacccatattacatagtcaag
cagggaaagattaatcagatggccacagcacccgattcccagcggctgaagcttctgaga
gaggtggcgggaacacgagtgtatgacgaacgaaaggaggagagcatttctctgatgaag
gaaacagagggcaagcgagaaaagattaatgagttgctgaagtacattgaggagcgtctt
cacactctggaagatgagaaagaagagctggctcagtaccagaagtgggacaagatgagg
agggctctggagtacaccatttacaaccaggagctgaatgaaacccgcgccaaactggac
gaggtgaccacaaagagagagacctgtggagacaaatccagacagctgcgcgacgcccag
caagatgccagagacaaagtggaggaaacagagcgtgttgtgcgggagctgaagtccaag
atttctgctatgaaggaggagcgagagcaactgtcggcagagcgccaggagcagatcaag
cagaggaccaaactggagctgaaggccaaagacctgcaggacgagctggcaggaaacagc
gaacagaggaaacgtctgctgaaggagcgtcaaaagctgctggaaaaaatcgaagagaag
cagaaagaactgcaggagactgaacctaaattcaacatggtgaaggagaaggaggagcgg
ggcatttccagacttgcccaggccacacaggagaggacggacctctatgccaagcagggc
cgcggcagtcagttcacctccaaggaggagagagacaagtggatcaagaaggagctcaag
tccctggaccaggccatcaatgataaaaagaggcagattgcagccatccacaaagacctg
gaggatacagaggcgaacaaagagaagaaccttgagcagtataataaactggatcaagat
ttaaatgaggttaaaacgcgcgttgaggagctggacaagaagtattacgaggtgaaaaac
aagaaggatgaactccagagtgaaagaaactacctgtggcgtgaggagaatgcagagcag
caggccctggcagccaaacgagaggatctggagaagaagcagcagctccttcgagcggcc
actggcaaggccattctgaacggcattgacagcatcaataaagtcctggaacactttcgg
aggaagggcatcaaccagcatgtcatcaacggttaccatggcattgtcatgaacaacttt
gagtgtgaacctgctttctacacttgtgtggaggtgactgctggaacaaggttattttac
cacattgtagagactgatgaagtcagcaccaaaatactgatggagttcaacaaaatgaac
ttgcctggagaagtgacgttccttccactgagcaagctggacgtcagggacacggcctac
cctgaaaccaatgatgccatccccatgattagcaagctgcgctacagcccaaactttgac
aaggccttcaagcatgtgtttggaaagaccttaatttgtcgcagcatggaagtgtccacc
cagctggctcgagctttcaccatggactgcatcactctggagggtgatcaggtcagtcac
agaggcgctctgactggaggctactacgatactagaaagtctcgcctggagctccagaaa
gacatgaggaaggctgaggaggagctgacggagctggaggccaagctcaacgaaaacctg
cgcaggaacatcgaacgcatcaacaatgagatcgatcagctgatgaatcagatgcagcag
attgagacccagcagaggaagtttaaggcatccagagacagtattctgtctgaaatgaag
atgctgaaggagaagaggcagcagtcggagaagacgtttatgcccaagcaacgcagtctc
caaagtctggaggccagcctccatgctatggagtccaccagggagtccctgaaggctgaa
cttggtacagatctgctctctcagctcagtcttgaggaccagaggcgtgtcgatgacctg
aacgatgagatccgacagttacagcaggacaacagacaacttctgaatgagaggatcaag
ttggaggggatcatgacacgggtggagacctacctaaacgagaacttacggaagaggctg
gatcaagtggagcaggagctgaatgagctgcgggagacggagggaggaacggtgctcacg
gccaccacatcggagctcgacggcatcaacaaacgggtcaaagaaactctggctcgatca
gaagatctggactctttaattgacaagacggaagcagagatcaaggatcacatcaagagc
atggagcgatggaagaacattgagaaggagcagaatgacgccatcaaccacgacaccaaa
gagctggagaagatgaccaaccggcagggcatgctgctgaagaagaaggaggagtgcatg
aagaagatccgagagctgggctcgctgcctcaggaggcctttgagaagtaccagaccctc
acactcaaacagctcttccggaaactggagcagtgcaacacagagctgaagaagtacagc
cacgtcaacaagaaagctctggatcagttcgtcaacttctctgagcagaaagagaagctc
atcaagcggcaggacgagctcgatcgcggctacaagtccatcatggagctcatgaacgtc
ctggagctgcgcaagtatgaggccatccagctcaccttcaaacaggtgtccaagaacttc
agtgaggttttccagaagctggttcctggcgggaaggccacgctggtgatgaagaagggc
gatgccgaaggcagccagtcccaggatgaagaaggaggcgcagacagcgagaggggctcc
ggctctcagagcagcgttccctccgtggatcagttcactggagttggcattcgggtgtcc
ttcaccgggaagcagggagagatgagggagatgcagcagctgtctggaggacagaagtct
ctggtggctttggccctgatatttgccatccagaagtgtgaccccgcccccttctacctg
tttgatgaaatcgaccaggcacttgacgctcagcacagaaaagccgtctcagacatgatc
gtggagctggcgggtcacgctcagttcatcaccaccaccttcaggcctgagctgttggag
tctgccgacaagttctatggagtcaagttcaggaacaaggtgagtcacatcgatgtgatc
acagcggagcaggctaaagactttgtggaggacgacaccacccatggttaa
DBGET
integrated database retrieval system
