Oryzias melastigma (Indian medaka): 112137472
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Entry
112137472 CDS
T07439
Symbol
igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112137472 (igf2bp3)
03041 Spliceosome [BR:
oml03041
]
112137472 (igf2bp3)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112137472 (igf2bp3)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112137472 (igf2bp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
RRM_1
KH_PNO1_2nd
KH_NusA_2nd
KH_NusA_1st
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
112137472
NCBI-ProteinID:
XP_024115580
Ensembl:
ENSOMEG00000017916
LinkDB
All DBs
Position
LG11:complement(8443739..8466891)
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AA seq
585 aa
AA seq
DB search
MNKLYIGNVSAEASEEDLESVFEQWKIPHSGPFLVKSGYAFVDCPDEKAAMRAIDVLSGK
VELHGKLLEVEHSVPKRQRSCKLQIRNIPPHMQWEVLDGMLAQYGAVESCEQVNTDTETA
VVNVRYGAKDHARMAMEKLNGYMMDNYPLKVSYIPDETAAPEGPGVGGRRGFNARGPPRS
GSPGLGARPKVQSDIPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAE
KPITIHSTPEGCSKACTTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKK
IEQDTGTKITISPLQDLTLYNPERTITVKGCIEACSRAEEEVMKKVREAYESDMAAMNLQ
SNLIPGLNLNALGLFPSGTPGMGPSMSNFPPSGAHGGCSSFGQGQPESETVHLFIPALAV
GAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVIIVGPPEAQFKAQCRIFGKLKEE
NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPRDQTPDENDQVIV
KISGHFFACQLAQRKIQEILAQVRRQQQQQLKPQPGGQPPMPRRK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctttacattggcaacgtgagcgcagaggcgagcgaggaggacttggaaagt
gtctttgagcagtggaagattccgcacagtggtccgttcctggtcaaaagtggctatgcg
tttgtggattgccccgacgagaaggcggcgatgagggccatcgatgttctttcaggtaaa
gttgaactccacgggaaacttctggaagtggagcattctgttcctaagcgtcaaaggagc
tgcaagctgcagatcaggaacatcccgcctcacatgcagtgggaggttttggacggcatg
ttggctcagtatggtgccgtcgagagctgtgaacaagtaaacactgacacagagactgcc
gtagtaaatgttcgatatggagctaaagaccacgccagaatggcgatggagaagctgaat
ggatacatgatggacaactatcccctgaaggtgtcttatataccggacgagacggcggct
ccagaaggtcctggagttggaggcaggagaggctttaacgctcgcggccccccgcgttcc
ggctcccccggtttgggcgcgcggcccaaggtgcagtcggacatcccgctgcgcgtgctg
gtccccacgcagttcgtcggggcgatcattggaaaggagggcgccactattcgcaacata
accaaacaaactcattcaaaaattgatattcataggaaggaaaatgcaggtgcagcagag
aaacccatcaccatccactcgactcctgaaggctgctccaaagcgtgtacgaccattatg
gagatcatgcagaaggaagccctcgacaccaagttcactgaggagatcccactgaagatt
cttgcacataacaacttcgtagggcgattgatagggaaagaggggcgtaacctaaagaag
atcgagcaggacacggggaccaagatcaccatctcaccacttcaggacctcacgctgtac
aacccagagcgaaccatcacagtgaaaggctgcattgaagcatgctctcgggctgaggag
gaggtgatgaagaaggtcagggaggcgtatgaaagtgacatggctgctatgaatctccag
tctaacctgatccctggcttaaatctgaacgcgttgggattgtttcccagtggaactcca
ggtatgggcccttccatgtccaacttcccgccttcaggagctcatggcggatgctcgtca
tttggacagggacagccggagtcggagacggttcacctgttcattcctgcgcttgctgtg
ggagccatcatcggtaaacagggtcaacacattaaacagctgtctcactttgcaggagcc
tcaatcaagatcgctcctgcagagggcatggatgccaagcagaggatggtcatcatcgtt
gggccaccagaagctcagtttaaggcacagtgtcgcatttttggtaaactgaaagaagag
aatttctttggacccaaagaggaggtaaagctggaggcccacatcaaggttccttctttt
gctgctgggagagtcataggaaaaggtggaaagacggtcaacgagctacagaacttgacg
tgtgcagaagtggtggtgccccgggaccagacgcccgacgagaacgaccaggtcatagtc
aagatcagcgggcacttctttgcatgccagctggctcagaggaagattcaggaaatcctg
gctcaggtgaggaggcagcagcagcagcagttaaaaccccagcctggaggccagcctccc
atgcctcgcaggaaatga
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integrated database retrieval system
