Oryzias melastigma (Indian medaka): 112137501
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Entry
112137501 CDS
T07439
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
oml04517
IgSF CAM signaling
oml04530
Tight junction
oml04810
Regulation of actin cytoskeleton
oml05100
Bacterial invasion of epithelial cells
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112137501 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112137501 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
112137501 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112137501 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112137501 (arpc1a)
05100 Bacterial invasion of epithelial cells
112137501 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112137501 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112137501 (arpc1a)
Membrane trafficking [BR:
oml04131
]
Others
Actin-binding proteins
Arp2/3 complex
112137501 (arpc1a)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112137501 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
EIF3I
Rax2
RMC1_N
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
112137501
NCBI-ProteinID:
XP_024115620
Ensembl:
ENSOMEG00000021367
LinkDB
All DBs
Position
LG1:12095093..12102396
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDSSKTASPL
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDIGTLSFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttttgctggagcccatcacctgccacgcatggaatcgcgacagg
acacaaattgccatcagtccaaataaccacgaagttcatatttacaagaagagtggtaac
cagtgggtgaaaacccacgagctgaaggagcacaatggacacattacaggtattgactgg
gctcccaaaagtgaccgtatagtaacttgtggagcagatcgtaacgcttacgtatggtcc
caaaaggaaggagtatggaagcctacgttggtcatcctcaggatcaaccgagcagccact
tttgtgaagtggtctccactggagaacaagtttgcagttggcagtggtgctcggctcatc
tctgtctgctactttgagtctgagaacgactggtgggtgagcaaacacatcaagaaacct
atccgctccaccatcctcagtctggactggcatcccaacaatatcttactggcggctggt
tcatgtgactttaaatgcagggttttctcagcctacataaaggaagtggaagagaagcca
ggtcccacaccctggggcagcaagatgccatttggagctgtgctagcagaatttggagga
gcaggtggagggggttgggtccactctgtctctttttcatcctctggtaaccgtctggct
tgggtcagccatgacagtactgtcactgtggtagacagctctaagactgccagtccctta
cagctgaagacggagttccttcctctcctcagtgtcatttttgtgtcagagaacagttta
gtggctgcaggccacgactgctgcccaatgctgttccgctgtgacgacattgggacgctc
tcatttgtctcgaagctggacctccccaagcagagcatccagaggaacatctctgctatg
gagcgcttcaggaacatggacaagagagccaccactgaagaccgcaacacagcgctggac
acactgcaccagaacagcatcacccaagtgtctatctatgaaggagacaaaagggattgt
cgcaagttctgcactacaggcatcgatggagcaatgaccatttgggactttaagagtcta
gaagcttccatccagggcctccgcatcatgtga
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