Oryzias melastigma (Indian medaka): 112137516
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Entry
112137516 CDS
T07439
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oml00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oml01100
Metabolic pathways
Module
oml_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112137516 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
112137516 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112137516 (xylt1)
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
112137516 (xylt1)
Glycosyltransferases [BR:
oml01003
]
O-Glycan biosynthesis
Glycosaminoglycan
112137516 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
112137516
NCBI-ProteinID:
XP_024115639
Ensembl:
ENSOMEG00000010182
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All DBs
Position
LG1:complement(4271699..4383589)
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AA seq
942 aa
AA seq
DB search
MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSTLDSGEDQESAGSSVRGKRDRVAG
NKAAGSDHFQRGVQRQPGQHLPSPGRGASRHKQQPDGYYSHRPKEKSRIDSNNENSVPKD
FENIDNSNFGARSQPHRQAPSSKQREYLQEKAHAQQQAWRDSSPSLGRSSNEVLPVGHQS
LAAGNNTVLPPGAVVEPQKHYRASQAQHVQPQHRHQHPHRKQATAATAEVTYDQPPKCEI
SGKEAISALSRAKSKHCRQQIAEVYCRHREGRLMPEKVTRYCPLEGKANVNIQWDEDSAE
SFPPNPVRIVFVLVIHGRASRQFQRLFKAIYHTSHFYYIHVDQRSNYLHRQVQIMAMKYP
NVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRTNNQLVAFL
SKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLN
RMFVDYVINSKDDLVTNMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNRKL
GCKCQYKHIVDWCGCSPNDFKPADFPRFQQTVRPTFFARKFEASVNQEIVNQLDAYLFGP
FPQGSPALNSYWESVYDEPDGVASLSDTMLTYYHSFSRMGLARAAASLQGNPNDHSCRYF
PMGHPVSVHLYFHSDQFQGYLVKHHANNLATRKLETMETWVAPKKNFKLTTPPTSTFSRL
QFAEVGTEWDAKERMFRNIGGLMGPMEETVGMQKWNKGPNVTVTVVWIDPTNVIAATYDI
LIDSSAEFTHYRPPLNQPLRPGVWSLRILHRWSPVAEIRFLIAPLAYNKHQPIRREDTLK
LHNGPVKSSYMEQSFHGLNPVLNIPVSLEYVEQAQRNAALTGLELERWTDSLVGELWEAA
DVCAVGPTACPVMQACAKSPWSSLSPDPKSQLGEPRADGRIR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggctcgtgtgcgcgcaggctggcccgccggtcccggtccgcgctgatcgcg
gcgctcacggtgctgctggtgcagactctgatcgtgtggaacttcagcaccctggactcc
ggggaggaccaggagagcgcgggctccagcgtgcgggggaagagggaccgggtcgcgggc
aacaaagccgctggcagcgaccatttccagcgcggagtccagcggcagccgggccaacat
ctcccttctccggggaggggggcgtctcgacacaaacagcagccggacgggtattactcc
caccgcccgaaggagaaaagtcgaatcgacagcaacaacgagaactctgtgcccaaagac
tttgagaatatagacaacagcaactttggagcacgctcacagcctcaccgacaagccccc
agcagcaagcagcgggagtatctgcaggaaaaggcccacgcacagcagcaggcctggaga
gacagctcccccagcctgggacgcagctcaaatgaggttctgcctgtgggccaccagtcc
ctggcagctggaaacaacaccgtcttacctcctggtgccgtggtggaaccacagaaacac
taccgcgcctcccaagcccagcacgtccagccacagcacaggcatcagcacccccacagg
aagcaggccaccgcagccacggcggaggtgacatacgaccagccccccaagtgcgagatc
agtgggaaggaagccatttctgctctgtccagagctaagagcaaacactgccggcagcag
atcgctgaggtgtactgcaggcacagggaggggcgcctgatgccagagaaagtcactcgg
tactgccctctggaaggtaaagctaacgtgaacatccagtgggacgaggactctgctgag
agctttccaccaaaccctgtgaggatcgtgtttgtcttagtcattcacggacgagcctct
cgccagtttcagcgcctcttcaaagccatctaccacacctcccacttttattacatacac
gttgaccagaggtccaactacctgcacaggcaggtccagatcatggcgatgaaatatccc
aacgtgagggtgaccccgtggcgcatggccaccatctggggcggggccagtctgctgacc
atgtatctgcgcagcatggctgacctgctggcaatgagggactggagctgggacttcttc
atcaatctaagcgctgctgattaccccatcaggaccaataaccagctggtggccttcctg
tccaaatacagagacatgaactttattaagtcccatggcagggacaatgcacggttcatt
cggaagcagggtctggatcgcctcttctttgagtgtgacacccacatgtggaggctggga
gaccggaaaatcccagaaggcatctctgtggacggaggctccgactggttccttctcaac
cgcatgtttgtggactacgtcattaactccaaggatgatctggtcaccaacatgaagcgt
ttttatgcctacactttacttcctgctgagtcgttcttccacacggtgctggagaacagc
gctcactgtgagagcatggtggacaacaacctgcgcatcacaaactggaaccgtaagctg
ggctgcaagtgtcagtacaagcacatcgtggactggtgcggatgctcgcctaatgacttc
aagccggcagacttcccccgcttccagcaaacggtgcggcccaccttctttgccaggaag
tttgaagccagcgtcaaccaggagattgtgaaccagctggacgcctatctgttcggtccc
ttccctcagggatctccagcactgaactcttactgggagagcgtgtacgacgagccggac
ggtgtggccagcctgtcggacacaatgctcacttactaccactctttctcgcggatgggc
ctggcccgggccgcagcctccctgcagggaaaccccaacgatcacagctgcaggtacttc
cccatgggccacccggtgtccgtccatctctacttccactccgaccagttccagggctac
ctggtcaagcaccacgccaacaacctggccacaagaaagctggagaccatggagacctgg
gtggcgcccaagaagaacttcaagctaaccacgccccccacaagcacattcagccggctg
cagtttgcagaggttggcacagagtgggatgctaaagaacggatgttcagaaacatcggt
ggcctcatgggtcctatggaagagacggtgggcatgcagaagtggaacaaagggcccaac
gtcacagtcactgttgtgtggatcgatccaaccaacgtcattgcagccacgtacgacatc
ctgatcgactcaagtgcagagttcacccactaccgcccgccgctcaaccagcccctgcgg
cctggcgtgtggagtctccgcatccttcaccgctggagccccgtggcagaaatccggttc
ctcattgcccctctggcctacaacaagcaccagcccatacgtcgagaggacactttaaag
ctgcacaacgggccggtgaagagcagctacatggagcagagtttccatggcctgaacccg
gtgctcaacatcccggtcagcctggagtacgtggagcaggcccagcggaacgcggccctc
accggtctggagctcgagcgctggacagacagtcttgttggcgagctgtgggaagcagcc
gacgtgtgcgccgtcggccccacggcctgtcccgtcatgcaggcctgcgccaagagcccg
tggagctccctaagcccagaccccaaatcccagctgggggagccccgagctgacgggcgc
atcaggtag
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