Oryzias melastigma (Indian medaka): 112137532 Help Entry 112137532         CDS       T07439                                  Symbol dchs2 Name (RefSeq) protocadherin-23   KO K16507   protocadherin-16/23 Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oml04515]     112137532 (dchs2) Cell adhesion molecules [BR:oml04515]  Cadherins   Cadherin related    112137532 (dchs2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 RET_CLD1 Fibulin_C CADH_Y-type_LIR DUF4307 TcaA_3rd_4th Motif Other DBs NCBI-GeneID:  112137532 NCBI-ProteinID:  XP_024115655 Ensembl:  ENSOMEG00000002140 UniProt:  A0A3B3B6S4 LinkDB All DBs Position LG1:complement(13166313..13197554) Genome browser AA seq 3256 aa AA seqDB search MELLRALLLALLCAQVHGQVYNLTLSVKEGLPARTIVGALGAGLSRHTTGFFISESRDSY VFRDLEIDADSGIISTAVVLDRESRDKYDFVAATLTGEVIRVRIEVEDVNDHSPVFPSGE VDLEVSELSPPGSRFHLEGAEDQDEGLLGTQGYRIIESNLTDYFLLDYWSSSEPPLHLDL ILSQKLDREKQDFFSLTIEGFDGGIPARSGRLQVKIRVLDENDNPPVFNQTEYHTSVHED APIGSVVCQVHALDPDLGDNGRVTYEINRRQSDPNHVFSINETTGLVYLNQQLDFETQPF HELIIRAQDNGAQPEYSNVFVGVKVLNINDNSPTITVLFLSETGEASVSEAASVGDYVAR ISVSDPDLEEERISVMLEGGDGKFTLKQTDDSLYALCVHSELDREDEDLYELRVKATDSG SPPLSSEMVLLLKVLDANDCRPVFEKDVYSISVAEDVPLGSSLIQMMARDADEGNNADIR FSILKSNQDGLIHIDPQTGLVTTAAALDKESQQELWFLVVAADGGELTLSSTATVSVTLE DVNDNEPVFQQQLYSVSIPEHSDVGSCFLQVVATDADTPEFGVLLYSLSDGFDRADRHPL FQVQPDTGELCVSQDIDRDAGLTVYDILIKAEDPGGQSAQTYVHIEIEDLNDNAPVFNPE QYTMSVSSHAPPGTEILSVIATDQDSGRFGHISYSIIPGDVSSLFILDTQTGMLFLNSSL THLGAASMKLFITAQDGGGLAAARPAEITVNVLQSAQTPAVFQKSRYTFTVPEDAAPGTH VGTVQAVVPMQSTKSVSYRISSGDPHNLFSIHSKSGVISSIKPLDHETQPYVLLVLQCFT ETSEVYSTTQVNVSIADVNDNAPVFPKSSDSITVSQSTPPGTVLFIAHAHDHDSGANGRV RYYLKRTGGMFAVERNLGTVTLNQSLQGGHQSSYGLEIVAEDEGDPSLSSILTLLVDVDQ RAGDDNLAFETLVYQVEIGEAYRRDSRVIQVRAHRTWGARTSNTDLTYSLETEPGFPPAP FRVHPKTGWLYLSNSLDFEAESRYRFQVLATSLDPALEDTTATATVIVRVLDVNDNAPVF GREVYFFTVSEGSSPQGLVGTVKADDEDSGKNSQLSYILLSDGKFFRINARTGEIINWVA LDRERHGQHTLKVMVTDQGHPRLNATATVHILITDINDNSPQFKHIPASKEMNIHIQADT PAGSVVTNMFATDLDAGENGTVTYSLMAEREAVGHFEVDGESGEIRTTQLFTQNTKQHYS LKVTARDGGVSPQENTAVLHVQVYGLEKTFGSSSHQTLMCFSVREDAKPGSIIGSVSVGS EGSFQYAIAEGDGSIHFGIDGSSGDLYVNQPLDYESASQFFLLVRAEDAGPAAGVNVSVA VSVTVEDVNDHSPWFLDELVIFGLREDAAVGSLAFAFHARDADGSSPNSALHYSLTSGSE VGESPSHFPFDLDPRTGRLIVAAPLDRESVPSYAFTVTATDQAISKDERRQAAVTAQLFL LDVNDNRPVFVSADTVQVMEDAEVGSLLHHFLAIDGDMGANGVTTLSIIAGNSKGVFSLE ERTGLLFLSSPLDYETQRVHRVTVCAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSDILYE ASVAENRDPGEPVVRVSATDIDSEENAVVWYSLLPGPGYELFSINPYSGVITTNSRLDRE QQSHFMLRVQARDSGARPLSGTATVLCSVLDDNDNPPVFMQSSFSIRLPENLPPGVIHTT QAFDPDQGENGTIYYSLLGEDYGGLFTVNSQTGAIGSTRVLDREETENYTLTIKALDCGS IPLSSTTQLQLVLLDQNDNPPSFSFRSYHASVAEGLSAGSEVLRVSAFDPDEGPNGDVTY SLTEDSNQGAFSIDAFTGVIRTTRSLDRETRAQYTLRAVASDGCSQGPLSSVASVSIQVE DINDNTPVCDQNPFDAWVSTRTPPSQILTTVTATDGDEGENGTVRFRLYDEENLFDINSE SGEISLRRRVRAGFSGRRLQVVVSDRGHPALTSNCLVLIHLRGEYEGLQFTNTVYNVSVK ENSRAGTWIAKVEARDQTTNQQRITYSIFSGNENHIFSINRHTGDIRVQKDNSLDFEVDP HMQLVVLADSGLQTAHCRVSVTLLDINDNAPLFEHNSYRTAVWEGQVLNTYIMQVFASDA DSGVNGQIEYSILSGNNNQAFILDSVGGILATNVALDREITSSYKLVLQASDKGTPPLSS TTTIRVQVVDVNDNSPVIPAMDPAVIAENLPAGSVVTKVVANDVDLNSAITYSFSANSSS SAPFAIDRYTGLITLSQALDYEVQTEYTLKVWASDSIHHTSGEVKVQVLDVNDNAPVFTQ VSYQVEMSELASAETFVLTVSATDRDSGLNGKITYRLLSSPSQGFYVQPDTGSVFTSKPL KALTNNNPILLVEARDGGDPVRSTVTSIDVLIQDSNDHEPLFHQDVYTLTLPEDTSTDTT LLTLSAEDKDWSQENTHLDYAITGGNEEKRFCLEVKMAALENEMKNVGKLVLCSPLDRET TESYELTVSVSDRGIPPLNSSAVVRVTVTDCNDNSPIFSSTEYHVQVSENSQIGTSLLQV SAQDPDLGINGLVRYDIIAGDNKGHLKLDPYTGLLVVNHLLDYEQDPKYILTIRASDGGE ETENHKVSFAVVFVTVSDENDNTPYFTFPAVNCSVLENLPAFTHTCSVLAVDNDSGPYGQ LTYSVVSPCFMGYSIGNPEKKEAFAIDPLTGDIHTRQTFDYERENEYCFVVEARDKGDKT ATTRVQVFIKGVDEFSPVFTQKKYHFLLQEHIKTGETVGFVMAMDQDGGVDGLVEYSLVN SSPFFSINKTIGAIYVSGPVYRRRGSHGGEDVVELVVSAGSPRPGSRTTTCLVYVNISSS AEALYGMPLNAHVLTLSIPLAIFFLVLAILVCLTVRYKIKETKNRKVDGLAAQLRHGSIS ESDSQTQSVISLQDVTQSNILVSKREVSNLYCQSDSSGRGSAEGETAEDQEIKWINEFPC RKRDETATQATGIQKNSLPADNLSSHSIDVGPEHILSINKCLCIGVESTESLYHFKEEGG GEGLLPVVLKVKDLEENMGTKGYAPFSQALAPADSLSSLVCLEEQLQGSYYWDHLLDWEP CFQNLASVFTDIGMLPDEELQGGREDLAAESSCLMYPPPLITRVAQPGIRTVPPRKPGRV PSLSRKSSFPKYAYSPLGRNTGLTPSAMTPTFSPSLSSLTVRTPNTSPVVSDTGVGGIRV DSGPHTVSLLESEIHV NT seq 9771 nt NT seq  +upstreamnt  +downstreamnt atggagctgctccgcgcgctcctgctggcgctcctgtgcgcacaggtgcacggacaggtc tacaacctgacgctgtctgtcaaagagggtctgcccgccagaaccatcgtcggagctctg ggagcgggactgagcagacacaccactgggttcttcatctcagagagcagagactcgtat gtgttcagggacctggagatagacgcagactcgggcatcatctccaccgcggttgtgctg gacagagagagcagagacaagtacgactttgtggcagccactctcacgggggaggtgatc agagtgaggatagaggtggaagatgtcaatgatcactctccggtgtttccatctggggag gtggacctggaggtgtcagagctgagtccaccagggagccggttccatcttgaaggtgca gaagaccaggatgaggggctccttgggactcaggggtacaggatcatagagagtaacctg actgattatttcctcctggactactggagctcatcagagccaccccttcatctggacctc atcctgagtcaaaaactggacagagaaaaacaggacttcttctctttgaccattgagggc tttgatggtgggattccagccagaagtggaaggctgcaggtgaaaatacgtgtgctggat gaaaacgacaaccctcctgtgttcaaccagactgaataccacacctcagtccatgaagat gcccccatcggatctgttgtgtgccaggtccatgccctcgaccccgacctgggagacaat ggcagagtgacttatgagatcaacaggcggcagagtgacccgaatcacgttttttcaatc aatgaaaccacagggttggtttatctcaaccaacagcttgattttgagactcaaccgttt cacgagttgatcatcagggcacaggacaatggtgcccaacctgagtacagcaacgtcttt gtgggtgtcaaggtgctcaacatcaacgataacagtcccaccatcacggtgctgtttctc agtgagacgggagaggcttcagtgtctgaggcagcatcagttggggactatgtcgctcgg atttcggtgtcagacccagaccttgaagaggagaggatctccgtcatgcttgaaggaggg gatgggaagttcaccctgaagcaaacggatgactctctctatgctttgtgtgttcactct gagcttgacagggaggacgaggacctgtacgagttgagggtgaaagctacagattctggg agtccccctctcagcagtgagatggtccttctcctgaaggtgctagatgcaaatgactgc cgccctgtctttgagaaagacgtgtactcgataagcgttgcagaagacgttcctctaggg agttccctcatacagatgatggctcgagatgcagacgaagggaacaacgcagatatcagg ttctccatcctgaagtccaaccaggacggcctgatccacatcgacccacagacgggcctg gtcaccacggcagcagccctcgacaaagagtcccagcaggagctgtggttcctggtggtg gcagcagatggaggagagctgactctttcatccacagccacagtgtctgtgacgctggag gacgtcaacgacaacgagccagtgttccagcagcagctgtacagcgtgtccataccagag cacagcgacgttggaagctgctttttacaagttgttgccacggatgcagacacccctgag ttcggcgtgctgctctactctctgtccgatggctttgacagagcggacagacaccccctc ttccaagtccagcctgacacaggagagctgtgtgtctcccaggacattgacagagatgca gggctgactgtttatgacatcctgatcaaagctgaagatccaggaggccagagcgcccaa acttatgtacatattgaaatagaagacttgaacgataacgctccggtgtttaaccctgaa cagtacaccatgagtgtcagcagccacgccccgcccggcaccgaaatcctcagcgttata gccactgaccaagactcgggcaggtttggacatatcagttacagtattatacccggagac gtgtccagtttgtttatactggatacacaaacagggatgctcttcctgaactcctccctg acccacctgggtgcagcaagtatgaagctcttcataacagcccaggatggggggggcctc gccgcagccagacctgcagaaatcaccgtcaacgtcctgcagagtgctcagactccagct gtgttccagaaatcccgctacactttcacagttcctgaagatgcggcgccggggacgcat gtggggacagtgcaggccgttgttccgatgcagtcaacaaaatctgtttcctatcgtatc tcttctggagatccacacaatttgttttccattcattcgaaatctggcgtgatcagcagc atcaagcctctggaccacgagactcagccgtacgtcctgctggtccttcagtgcttcact gagacctctgaggtctacagcacaactcaagtcaacgtctccatagcggacgtcaatgac aacgcccccgtctttcccaaaagcagcgactccatcacagtgtcccagagcactcctcct ggcacagtgctcttcatcgctcatgctcatgatcacgacagtggggccaatggaagggtg cgctattacctgaagcgtacaggtgggatgtttgccgttgagcgcaaccttggaacggtc accctcaaccagagtttacaggggggtcatcagtcgagctacgggctggaaatcgtcgct gaggatgaaggagatccctcactgagctccatactgactcttttggttgatgtcgaccaa agagctggcgacgataacctggcgtttgagactcttgtttatcaggtagagataggtgag gcataccgcagggactctcgagtcatccaggtgagagcacaccggacctggggagctcgc acgtccaacacagacctgacttactctttagaaacagaaccggggttccctcccgctccg ttccgtgttcacccaaagaccgggtggttgtacctctccaacagtctggattttgaggct gagtcaaggtatcgttttcaagtgttagccacatccttggatcctgctctggaagacacc acagcgacagcaaccgtgatcgtccgtgtgttggatgtcaatgacaacgcaccggtgttt ggcagagaggtttacttcttcactgtgtcggaggggtcctctcctcagggcctcgtggga acagtcaaggctgatgatgaggattctgggaagaacagccagctgtcctacatccttctg tcggacgggaagttcttccgcatcaacgctagaacaggtgagatcatcaactgggtggcg ttggatcgggagcggcacggccagcacactctaaaggtgatggtgacagaccagggacac cctcgcttaaacgccacggccaccgttcacatcctgatcacggacatcaacgacaacagt cctcagtttaaacacattcctgccagcaaagagatgaacatccatatacaggcagataca cctgcaggatctgtggtgacaaacatgtttgcaacagatttggatgcaggagagaatgga acagtcacttattctcttatggcagaaagggaagcagtgggacactttgaggtagacggt gagagtggagagatcagaaccactcagcttttcacccaaaacaccaaacagcattactct ctgaaagtaacagcaagggacggtggagtctctcctcaagagaacactgcagtgcttcat gtgcaggtgtatgggttagagaaaacgtttggcagctctagccaccagactttgatgtgt ttctctgtgcgtgaggacgccaagcctggatctatcattggttctgtgagtgttgggagt gaaggcagctttcagtacgccatcgctgaaggggatgggagcatccactttggcatcgat ggctcctctggtgacctctacgttaaccagccgctggactatgagtccgcctctcagttc ttcctgctggttcgagcggaggacgcgggccctgctgccggtgtgaacgtgtctgtagcc gtcagcgtcactgtggaagacgtcaacgatcactcgccctggttcctggacgagctggtg atttttggtcttcgggaagacgctgcagttgggtcgctggcgtttgcttttcacgccaga gatgcagacgggagttctccaaacagcgctctccattacagcctgacttctggctctgaa gtcggcgagtctccgtcgcacttcccctttgacttagacccacgcacaggacgcctgatt gtagcagctcctctggaccgagagagtgtcccttcttacgccttcactgtaactgcaaca gaccaggccatcagcaaggacgagaggagacaggcggcggtgacggctcagctctttctg ctggatgtgaacgataaccggccagtgtttgtgtctgcggacacggttcaggtgatggag gatgcagaggtggggagtctcctgcatcattttctggctatagatggggacatgggggca aatggggttaccactctctccatcatagctggaaacagcaaaggagtcttctcactggag gagagaacaggtctcctgtttctgtcctctcctttggactacgagactcagcgagtccac cgcgtaaccgtctgtgctgttgaccatggcgccccccagctctcctccactcagactctg acggtgaaggtgggggacgtgaacgatcaggcaccggtcttcagtgacattctctatgag gccagtgtggcagagaacagagaccccggagagccagtggttagggtgtctgcaactgat atagactcagaggagaacgctgtggtgtggtacagtctgctacccggtcccggctatgag ctgttcagcatcaacccgtactcaggtgtgataaccaccaactcccgcctggacagagaa cagcagtcacactttatgctcagagtccaggctcgggacagcggcgcccgcccgctttca ggtacggccaccgttctgtgctctgttctggatgacaatgacaacccaccagtcttcatg cagtcgtcgttcagcatccgcctgcctgaaaaccttccccctggggtcatccacacaact caggcctttgacccagaccagggagaaaacggcaccatctactactccttattaggtgag gactatggaggtttgttcactgttaacagtcaaactggagccatcggcagcactcgggtt cttgatcgggaagaaacagaaaattacactctcacaataaaagccctggactgtggatcc atcccactgagctccaccacccagctccagctggtgctgctggaccagaacgacaacccc ccctccttcagctttaggagctaccacgcctctgttgcggagggtctttctgctggaagt gaggttctgcgtgtcagcgcctttgacccagacgaaggcccaaacggggatgtgacctac tccctgacagaggacagcaaccagggtgccttttccattgacgccttcaccggagtgatc cgcaccaccaggtccctggacagagagacccgagctcagtacacgctcagagcggtggcc tctgacggctgctctcaggggccgctgagctctgtggcgtccgtgagcatacaggtggag gacatcaatgataacacgcccgtctgcgatcagaaccccttcgatgcgtgggtatccacg aggacgccgccaagtcagatactgacgacagtgacggcgactgacggagatgagggggag aacgggaccgttcggttcaggctgtacgatgaggagaatctgtttgacatcaacagcgag tctggagagatctctctgaggaggcgagtgagagcagggttctcggggaggaggctacag gttgtagtttcagacagaggacatcctgctctgacctccaactgcctggttctgatccat ctgagaggagagtatgaaggactgcagttcacaaacacggtgtacaatgtttctgtgaag gagaacagcagagcagggacttggattgcaaaagtggaggccagggaccaaacaaccaat caacagagaatcacatactccatattcagtggcaatgaaaatcatattttctccatcaac cgtcacacaggggacatccgtgttcagaaagataactccttggattttgaggtggaccct cacatgcagctggtggtgctggccgacagcgggctgcagacggctcactgtagagtctcc gtcacgctgctggacatcaacgacaacgcaccgctgtttgaacacaacagctatagaact gctgtttgggaggggcaagtgctcaacacctacatcatgcaggtgtttgcatcagacgca gacagtggtgtgaatggacagatcgaatattccatcctgtcggggaacaataatcaggcc ttcattttggactctgtgggaggcatccttgctactaatgttgctctggatcgtgagatc acctcttcgtacaagctggttctgcaggcttcagacaaaggaactcctcccctcagcagc accaccaccattagggtccaagtggtggacgtcaacgacaacagccccgtcatcccagcc atggatcctgcagtcatcgctgagaatctgcctgcagggagcgtggtcacaaaggtggtc gcgaacgacgttgacctgaattcagctataacctacagcttctcagcgaacagcagcagt agcgctccatttgctatcgaccgctacaccgggctcatcaccctgagccaagctctggac tatgaggtgcagacagagtacactttaaaagtatgggcgtctgactccatccaccacacc tctggagaggtcaaagttcaagtgcttgatgtgaatgacaacgctccggtcttcacacag gtttcataccaggtggaaatgtcagaactggcctcagcagagacctttgttctgacagtg tcagccaccgaccgagattctggactcaacggaaagatcacctacagacttctatcatcc ccctcgcaaggcttttacgtgcagccagacacaggttctgtttttacaagcaagccctta aaggccctcacaaataacaatccgatccttctggttgaggcaagagatggcggggatcct gttcgctccacagtcacttccattgatgtgctgatccaggactccaatgaccatgagcct ctctttcatcaggacgtctacacactcactctgccagaagacacatccacggacactacc ctcctcactttgtctgcagaggacaaagactggagccaagagaatacacacttggactat gccatcacggggggaaacgaagagaaacgattttgtttggaggtgaaaatggcagctctt gaaaatgagatgaaaaatgttggaaagctcgtcctgtgtagtcctttggatcgtgaaaca acggagagctatgagctaacagtgagcgtttccgaccgagggatacctccattgaacagc tcggctgttgtccgggtaacggtgacagactgcaatgacaacagccctatcttttccagc acagagtaccacgtccaggtgagcgaaaacagtcagataggtaccagtctgctgcaggtc agtgctcaggaccccgacctgggaatcaatggcttggtgcggtatgatatcattgctgga gacaataaaggtcacctaaaacttgacccttacactggccttttggtggtcaaccactta cttgactatgaacaagacccaaaatacatcctaactatcagagcatctgacggaggtgaa gagactgaaaaccataaagtatcttttgcagttgttttcgtcacagtatcagatgaaaat gataatactccatacttcacgttccctgcagtcaactgctcggttctggagaaccttcca gcatttactcacacgtgttccgttcttgctgttgacaatgactcgggtccctatggccag ctcacatactctgttgtctccccctgcttcatgggctatagcattggaaacccagagaag aaggaagcctttgctattgatccgctcactggtgacatccacaccagacagacctttgat tatgaacgagaaaatgagtactgctttgtggtggaggccagagacaaaggcgacaaaaca gccacaactagagtgcaggtgttcatcaagggagtggatgagttcagtcccgtctttacc caaaagaaataccacttcctcctgcaagaacatataaaaactggagaaactgttggtttt gtgatggccatggaccaagatggaggtgtggatgggctggtggagtactcgcttgtcaat tcctcaccttttttctcaatcaacaaaaccattggtgccatttatgtgtcaggtccagtc tatcgtagaagaggaagccatggcggtgaggatgtggttgagttggtggtctctgcaggt agccccagaccgggctccaggactacaacctgcctggtgtatgtcaatatctccagttca gcagaggccctctacggcatgcctctcaatgcgcatgtgctcactttgagtatcccactt gcaatatttttccttgtgctcgctatccttgtctgcttgactgtcagatacaaaattaaa gagaccaaaaaccgaaaggtggacggtttggctgcccagctcagacatggttcgatcagt gaatctgacagccaaacacagagcgtgatatccctgcaggatgtgactcagtctaacatc ttggtctcaaagagggaagtttcaaacctttactgtcagtcggactcgagtggccgtgga tcagcagaaggagagactgctgaggaccaggaaatcaagtggatcaatgagtttccttgc cgtaaaagagatgagacagccacacaggccaccgggattcaaaagaattccctacctgca gataatctttccagccactccattgatgttgggccagaacacattttatccattaataaa tgtttgtgtattggtgtggaaagcacagaaagcctctaccatttcaaggaggaaggagga ggtgagggactacttcctgtagtccttaaggtgaaagatttggaagagaacatggggaca aaagggtatgcccctttttctcaagccttagctcctgcagattcgttatcttcactagtg tgccttgaagagcagctgcagggcagctactactgggaccacctgttggactgggaaccg tgcttccaaaacctggcctctgttttcacagacataggcatgcttcctgatgaggagctt caaggagggcgagaggacttagcagcagagtccagctgcctcatgtatccacctcctctg ataacaagagtggctcagcctggcattcgaactgttcccccccggaagccagggcgagtc cctagcctaagtaggaagtcctctttccccaaatatgcttattcgcctttgggcagaaac acaggactcactccatcagccatgactccaaccttctcgccgtcactgtcatcccttact gtaagaacccccaatacctctccagttgtttcggacactggggtagggggcatcagagtc gactcagggcctcacactgtcagccttttagagtccgaaattcatgtttga

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