KEGG   Oryzias melastigma (Indian medaka): 112137548
Entry
112137548         CDS       T07439                                 
Symbol
ears2
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml00860  Porphyrin metabolism
oml00970  Aminoacyl-tRNA biosynthesis
oml01100  Metabolic pathways
oml01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:oml00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    112137548 (ears2)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    112137548 (ears2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:oml01007]
    112137548 (ears2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oml03016]
    112137548 (ears2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:oml02048]
    112137548 (ears2)
Enzymes [BR:oml01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     112137548 (ears2)
Amino acid related enzymes [BR:oml01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   112137548 (ears2)
Transfer RNA biogenesis [BR:oml03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    112137548 (ears2)
 Prokaryotic type
   Other AARSs
    112137548 (ears2)
Prokaryotic defense system [BR:oml02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    112137548 (ears2)
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2 Myb_DNA-binding_7 Methyltrans_Mon_1st
Other DBs
NCBI-GeneID: 112137548
NCBI-ProteinID: XP_024115680
Ensembl: ENSOMEG00000018724
LinkDB
Position
LG1:10886772..10892481
AA seq 548 aa
MWTIIMPPWVQQASRKCLQHTWVSRGGFRCLTVAKKRRNDVQQHPAVSRSCSTVQSDVRV
RFAPSPTGFLHLGGLRTALYNYIFAKKHGGAFVLRLEDTDQNRLVPGAADSIEDMLEWAG
IPPDESPRRGGPLGPYMQSQRLDLYSKTAQQLVESRHAYYCFCSPQRLELLKKEALRVGQ
TPRYDNRCRHLQAEQVQEKLAQGQPHVIRFRLEEGVEPFQDLIFGWNRHEVAQVEGDPVV
MKADGFPTYHLANIVDDHYMKISHVLRGSEWLISTSKHLLMYHALGWQPPTFGHLPLLMN
KDGSKLSKRQGDIFIENFRRDGVLPEALLDITTNCGSGFTTNRMGRRIEELISEFNPSKI
TTHSALMDLEKLPEFNRIHLQKRIENEEQCHLLVKELREEILQAYTTEIQDREVLLEDYI
KRVLQLRKGHITSLKELLQPTYSYLWVRPSFSSQQVAALTSEAHLIASLVLKLIEEQKEK
LSVEELNKDLKMLAKKTEATKYRDVMKLLRLTMSGLQQGPSVAEMMVSLSPAEVSHRFQK
LLHLTDSC
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgtggaccatcatcatgcctccgtgggttcaacaagctagcagaaagtgtcttcagcac
acttgggtttcccggggagggtttcggtgtttaaccgtggccaagaaaagacgaaatgac
gtgcagcagcatcccgccgtcagccgaagttgctccacggtccagagcgatgtgagagtc
cggtttgcccccagtcccacaggcttcttacaccttggaggtctacggacagccctctac
aattatatttttgcaaaaaagcatggaggcgcttttgttctgaggctggaggacacagat
cagaacagactggtaccaggagcagcagattccatagaggacatgctggagtgggccggc
atacctcctgatgagagcccccggcgcgggggtcccctgggtccctacatgcagtcccag
agattagacctttacagcaaaacagctcaacagcttgtggagagccgacacgcctactat
tgtttctgtagtcctcagagactcgagctgctgaagaaagaagctttaagggttgggcag
acaccaaggtatgacaacaggtgtcgccacttgcaagctgagcaggtccaggagaagctg
gctcagggacagcctcatgtaatcaggtttcgtttggaagagggcgttgaaccttttcag
gatctgatatttggatggaatcgccatgaagtagcacaggtggagggggaccctgtagtc
atgaaggcagacggtttccccacataccaccttgcaaacatagtagacgaccactatatg
aagatcagccacgtactgcgggggtctgagtggctcatctcgacctccaaacacctgctg
atgtatcacgctctcgggtggcagccgccgacgttcggacatctgccacttttgatgaac
aaagacggcagcaaactgtccaagagacagggagacatttttattgaaaacttcaggagg
gacggggtcctgccggaggctctgctggacatcaccactaactgtggatctggcttcacc
accaatcgaatggggcggaggatagaggaacttatttctgagtttaatccttcaaagatc
acaactcattctgcactgatggacctggagaaactaccagagtttaataggatccacctg
cagaaacgaatagaaaatgaggagcagtgtcatttgctggtaaaagagctcagggaagaa
atcctgcaagcctacaccacagagatccaggacagagaagtgctgcttgaggactacatc
aaacgtgtgctacaactccggaagggtcacataacctccctgaaggagctccttcaaccc
acctactcctatctgtgggtgcgtccttctttctccagccagcaggtggcagcactcacc
tcagaggctcatctcattgcttcattagtgctgaagttaatagaggagcagaaggagaag
ctttctgtggaggaactcaataaagacctgaagatgctggctaagaagactgaagccact
aagtacagagatgtgatgaagttgttgcgtctgaccatgagcggtttgcagcaaggccca
agtgttgcagagatgatggtttctctgagtcctgcagaggtcagccatcgattccagaag
cttctgcatctcacagacagctgttaa

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