Oryzias melastigma (Indian medaka): 112137582
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Entry
112137582 CDS
T07439
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112137582 (tmc6b)
03037 Cilium and associated proteins [BR:
oml03037
]
112137582 (tmc6b)
Transporters [BR:
oml02000
]
Other transporters
Pores ion channels [TC:
1
]
112137582 (tmc6b)
Cilium and associated proteins [BR:
oml03037
]
Other cilia and associated proteins
Stereociliary proteins
112137582 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
112137582
NCBI-ProteinID:
XP_024115743
Ensembl:
ENSOMEG00000012507
LinkDB
All DBs
Position
LG1:7426327..7449043
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AA seq
825 aa
AA seq
DB search
MAGNFDLNQPLVGAGLESPADEEGVHVSFNQLIAEQCQAGERLDGFELQQLDEESRDYVA
ELGSGFESSGRGLYDIESDDDGRQTDPLVSVPWSSATMKILSSMPSRTIGRSRGAILSQY
YNKTLQLRRRSQSRPSIRDFSHSSRPSIRGYGMEVDVIDGPQSEMEKSERLVNNLQNLSM
GDRMKMLRGMPLSVVEKKELRRKTLQRDKPLTSSSKIPCCSQLKYYIIIAVRHSWYSWLS
FLHSLQLWQFLLKRVGGRFGTGVLSYFLFLKTLLFFNVFLFLVTFLFLVLPQAMHPPELP
EERRNFTGLDLISGAGHFTDTLMYYGYYSNFTLRRSCAGQHNTSASSAPDCLSKRLSYNM
SLAYFFTIGMSFFITCIILVYSMSKSFGRSFRIDKSYSILAMKVFSSWDFKVIKKSSVEL
MSENNCTQLKEILAEVVQKKEKTGPCQALWRLMVHGLAWAICIGATAGCVISVYFFSEFM
HKDLQRTARLANTNPLLKEASLLALPALVSLLNLLLPGLFNLAAWMEEYHSPSVRTYVAL
GRNLMLKVSVLAVLCYHWLGRVAAKPSDINLVCWETFVGQELYRFLIMDFIFTLLNTLFG
ELLWRLFSQRVLGRGRKPAFDIARNVLDLIYAQTLAWIGVLFSPLLPAVQILKLLLLFYV
KVSSVMMNCQAPRKPYRVSQMTTIFITLLCFPSFLGASVCVTYTMWSIPPSTSCGPFRHL
GTMFQAGKRWVQELEKNNPDLSVVAKVHAYLVENPFFLFVGAGIFLIVIYFYSQVVDGQR
KVIALLQEHIEKEGVDKKYLITQLQSVHERKKGISRRLRSQDSGC
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaactttgacctgaaccagcctctcgtgggggccggactggagagcccagca
gatgaagaaggtgtccatgtcagcttcaaccagctgatcgcagaacagtgtcaggcggga
gaacgtcttgatggatttgagctgcagcagctggacgaggagagcagagattatgtggcc
gagttggggtctggatttgagtcttcggggcggggtctttacgacattgaatcggacgac
gatggacgacaaactgacccactggtcagtgtaccctggtcctctgccacgatgaagatc
ctgtcctccatgcccagccgcaccattggccgcagcaggggggccatcctctctcagtac
tacaacaagaccctgcagctccggagacgcagtcagagccggccgtccatccgagacttc
tcccactcctcccggccgagcatccgaggatatggcatggaggtggacgtgattgacgga
ccccagtctgagatggagaagagtgagcgcttggtgaacaacctgcagaacctctcaatg
ggagaccgaatgaagatgctgcgagggatgcctttgagcgtggttgagaaaaaagagctg
aggaggaaaacattacaaagggacaagcccctcacctccagcagtaagattccttgttgc
agtcagctcaagtattacatcatcatagcggtgaggcacagctggtacagctggctgtcc
ttcttgcactccctccagctgtggcagtttctcctcaagagagttggaggtcgctttgga
accggagtgctttcctacttcttgttcctgaagaccctcctcttcttcaacgttttcctg
ttcctggtcacgttcctgttcctggtgctcccccaggcgatgcaccctccagagctgcct
gaggagcggcggaacttcactgggctggacctcatcagtggagcggggcacttcactgac
acgctgatgtactatggatactacagcaacttcactctgcggaggagctgtgctggacag
cacaacacctccgcctccagcgcccctgactgtttgtccaagcgcctctcttacaacatg
tcacttgcctatttcttcaccatcgggatgtcgttcttcataacctgcatcatcctcgtg
tacagcatgtccaagtcgttcggtcgcagttttcgaatcgacaaatcgtatagcatcttg
gccatgaaggtcttcagctcgtgggactttaaggtcatcaagaagagctctgtggagctc
atgtctgaaaacaactgcacacagctgaaggagatactggctgaggtggttcagaagaag
gagaagaccggcccgtgtcaggctctgtggcggctgatggttcatggactggcgtgggcc
atctgcattggagccactgctggctgcgtgatcagcgtttacttcttctctgaattcatg
cacaaggatctgcagcgaactgctcgtctggccaacaccaaccctttactgaaggaagcc
agtctgctggccctccccgccctggtgtccctcctcaacctgctgcttccgggcctcttc
aacctggccgcctggatggaggagtaccactctccgtccgtgcgcacatacgtggctctg
ggacgaaacttgatgctgaaagtgagtgtgctcgcagtcctctgttatcactggctcggg
cgggtggcagccaaacccagcgacattaacctcgtgtgctgggagacgtttgtgggtcag
gaactgtaccgcttcctcatcatggactttatcttcacgcttctgaacacgctgtttgga
gagctgctctggaggttgttttctcagagagttctggggaggggcagaaagccggcgttc
gatatcgcccggaatgttctggacctgatctacgcacagacgctggcctggatcggcgtc
ctcttcagcccgctgctgccggctgtgcagatcctcaagctgctgctgctcttctacgtc
aaagtgagcagtgtgatgatgaactgtcaggccccccggaagccctacagggtcagccag
atgaccaccatcttcatcaccctcctctgcttcccctccttcctgggtgcatctgtgtgt
gtcacctacaccatgtggagtattccgccctccacctcctgcggcccgttccggcacctc
gggaccatgttccaggctgggaaacgctgggtccaggagctggagaagaataaccccgac
ttgtctgtggtcgccaaggtgcacgcctacctggtggaaaacccgttttttctcttcgtc
ggagccggcatcttcctgattgtgatctacttctacagtcaagtggtggacggccagagg
aaggtcatcgctttgctgcaggagcatatagagaaggagggagtggataaaaagtacttg
atcactcaacttcagtctgtgcatgagaggaaaaagggaatctccagaagactcaggagt
caggactctggctgttga
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