KEGG   Oryzias melastigma (Indian medaka): 112137609
Entry
112137609         CDS       T07439                                 
Symbol
rbm20
Name
(RefSeq) RNA-binding protein 20
  KO
K24052  RNA-binding protein 20
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112137609 (rbm20)
Spliceosome [BR:oml03041]
 Complex A
  Other components
   Complex A specific factors
    112137609 (rbm20)
SSDB
Motif
Pfam: zf-C2H2_jaz zf-met FANCI_S1-cap zf-U1
Other DBs
NCBI-GeneID: 112137609
NCBI-ProteinID: XP_024115791
Ensembl: ENSOMEG00000006884
LinkDB
Position
LG1:1155230..1215719
AA seq 1079 aa
MLGKGQGGGYPPEMSESLQSLSVPPLEVAEKKGLQRSVPLSGHLQAAPPPHNQQLLFSPA
SLQLAQLQAQLTLQRLKLAQGGNAATASSVLNQLLSNASMSQPLFNQLRTPTIVGSPPGA
FPSGVMSFPSSNAAVGPLVGGGLNQNSGNVRLNPISGEYANTSGSVFSCDTDRRFQFSSA
GASSAASVGTGDPQCTGITTQAKSITNTGIHPNVFDVPATFPAKEQTIHNSAARKEQWKG
HNNTHAGKVDLLSNPPAMWMAPGQPIQSRTELYNPEEPTSEPKLNCGTGISTFGSSCTAG
IGGYPPLLGNEDTLSSGVRTLQPYQVNDYYDVTPTQLPHQCSICDKKVYNLKDWDQHVKG
KLHLQNRALYTTDCSAASAGHYAVSRPSDGGLNLGGNNAVACSAASQDVSSGANASYLPA
SAMRIYSKTDSGFPCQQSEPFAPSQASAGRVVHICNLPEGSCTENDVINLGLPFGKVTNY
ILMRSTHQAFLEMAYDEAAQAMVQYYQLTPAMINNQKLLIRMSKRYKELQLKKPGKDVLS
VIQDITSQREREEMQEHYMIERPRSRSPINHSLSPPSHSPSFASCGSAHSPPGALCRGPE
RSSNGLGPHRSSWVWPHHIRRSEEERDRDYPWRNGDSMDDDLSNGRAVARRKTYQKHLDF
GSLRASDEQGVGEGMRESRDRQPRGSPQGFSSYRGMADHFYSEQMYKSEKSLRPSYPRHD
MKTKRRDGGDYYARSRHPDLGEEPPCRTAEDKRSSSPGRRSKKPSRRHESAEKHEKESAS
ENNDSRSKEKSVSPQENAKTDKVSDCDKDGDTKKDKENGEDTDEECWYPTNMEELVTVDE
VGGEDDSIIEPDLPEIEDFASKKSVVEETVEKPSAPPSLELQETLIQKSEQENSGEEAAS
QTEACVKNTEGDDEATAPSPEDQKKEPESYEPPLTHFPGEDFKAAVEMCLDDNRVPQTEM
QEDPPEKPLCSPEDSQTQEEEHVVEIINNKDQSTDENLKKEIEVPFSSAAQDKAVSEHSI
PLGVEFIVPSTGFYCKLCELFYTSESTAKTTHCRSTVHYKNLQKYLSQLAEDSLSSVLN
NT seq 3240 nt   +upstreamnt  +downstreamnt
atgctggggaaaggtcaaggtggaggatacccccctgagatgagtgagtccctgcagagc
ctctcggtaccccctctggaggtggcagagaagaagggcctccagcggagcgtccccctg
tcaggccacctgcaggcagcgcctccgccgcacaaccagcagctccttttctctccagcc
agcctccaactggctcagctccaggctcagctgacgctccagcgcctcaaactggcccaa
ggaggcaatgctgccactgcttccagtgtcctgaaccagttactctccaatgccagcatg
tcccagcccctgttcaaccagctacggactcccaccattgttggcagtccgccgggggcc
tttcccagcggggtgatgagcttcccctcttcaaatgcagcagtgggacctttggttggt
ggaggactgaaccagaactcagggaatgtgagactgaatcccatctctggagagtacgct
aatacgtcagggtctgttttctcctgtgacactgacagacgctttcagttcagttccgcc
ggagcctcgtcggcagcatccgtcggtacaggagacccacaatgcaccgggattaccact
caggcaaagagcatcaccaacactggcattcatccaaatgtatttgacgttccagcgacg
tttcctgccaaagagcagacgatccataactctgctgctcgtaaggagcagtggaaaggg
cacaacaacactcacgctggaaaggtggacctgctttctaacccccctgccatgtggatg
gcacctgggcagcccattcagtccagaacagaactgtataacccagaggaaccgacctct
gaacccaagttaaactgcggtactgggatttctacttttggttcaagctgcaccgcaggg
atcgggggctacccgcccctccttggaaatgaggacactttgtcttcaggtgttaggacg
cttcagccctatcaagtgaatgattactatgacgtgacccccactcaactgccacaccag
tgtagcatctgcgacaagaaggtctataatctcaaggactgggaccagcacgtgaaggga
aagctacacctgcagaaccgagccttgtacacaaccgactgctccgccgcatcagccggt
cactacgctgtcagcaggccttctgatggaggtctgaacctcggaggaaacaacgctgta
gcctgctctgctgcaagtcaagatgtgtcctcaggagcaaatgcttcttacctgccagcg
tcagccatgaggatttactccaagacggactctggatttccctgtcagcagtcagagcca
tttgcacccagccaggcttcggcaggccgtgtcgttcacatctgcaaccttcctgaagga
agctgcacggagaatgatgtcatcaacctgggactgcccttcggcaaagtcaccaactac
attctgatgagatctacacatcaggcatttctggagatggcctatgatgaagcagctcaa
gcaatggttcaatattaccagctgactccagccatgatcaacaatcagaaactcctaata
cggatgtctaaacggtacaaggagctgcagcttaagaaacctggaaaagatgttctgtca
gtcatccaggatatcacttcacaaagagaaagggaggagatgcaggaacactacatgatt
gagaggccacgctctcggagccccatcaaccattctctgagtcctccctcccacagcccc
agctttgcatcatgcggctctgctcacagccccccaggagcactctgcaggggtccagaa
aggagcagcaatggtcttggcccccacaggagctcttgggtttggccacaccacataagg
aggagcgaggaggagagggatcgggattatccctggagaaatggagacagcatggatgat
gatctttcaaatggacgagctgttgcccgacggaaaacttaccagaaacacttggacttt
ggcagcttaagagcttcagatgagcagggggtaggagaaggaatgagggaaagtagagac
cggcaaccccggggcagcccgcagggctttagctcctacagaggcatggcggatcatttc
tactctgagcaaatgtacaagtcagagaagtcgctgcggccttcatacccacggcatgac
atgaagaccaagaggagggatggaggcgattactatgcccgctccagacatccagacttg
ggtgaggagccaccatgcagaactgcagaagacaagagatcgagttcaccagggagaagg
agtaaaaaaccaagccggaggcacgaatctgcagagaaacacgagaaggaaagtgcttca
gaaaacaatgattccaggtcaaaagaaaaatcggtttcaccacaagagaatgctaagaca
gacaaagtctctgattgtgataaagatggagacactaagaaagacaaggagaatggagaa
gacacagatgaagagtgctggtatccaaccaacatggaagagctggtcaccgtggacgaa
gtgggaggagaagatgactctattattgagccagacctccctgagatcgaggattttgca
tccaaaaagtctgtagtggaggagacggtggagaaaccttcagcaccaccttccttagag
ctgcaagagacattaatacaaaaatctgagcaagaaaactctggtgaggaagcagcaagt
cagacagaagcttgtgtgaaaaacacagaaggtgatgatgaagcaaccgcgcccagccct
gaagaccagaaaaaagagccagagagctatgagccgccgctcacacacttccccggtgag
gacttcaaggctgcagtggagatgtgcctagacgacaatagagtaccgcaaactgagatg
caagaggatccaccggaaaaacctctctgttctccagaggacagtcaaacccaagaagaa
gaacacgtggtggaaataataaataacaaagatcaatcaacagatgaaaacctaaagaaa
gaaatagaggtgcccttttcatctgcagcccaagacaaagccgtcagcgagcacagcatt
cctttgggagtggagtttatcgtgccgagtacagggttctactgtaaactctgtgaactg
ttctacaccagcgagagcacggcgaagacaactcactgccgcagtaccgtgcactacaag
aacctgcagaaatatttgtcccagctggcagaggacagtctgtcaagtgtcctcaactag

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