Oryzias melastigma (Indian medaka): 112137670
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Entry
112137670 CDS
T07439
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04371
Apelin signaling pathway
oml04514
Cell adhesion molecules
oml04520
Adherens junction
oml05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112137670
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112137670
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112137670
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112137670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112137670
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112137670
04090 CD molecules [BR:
oml04090
]
112137670
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112137670
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112137670
CD molecules [BR:
oml04090
]
Proteins
112137670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
RET_CLD1
RibLong
Motif
Other DBs
NCBI-GeneID:
112137670
NCBI-ProteinID:
XP_024115860
Ensembl:
ENSOMEG00000004629
LinkDB
All DBs
Position
LG24:23131090..23159718
Genome browser
AA seq
492 aa
AA seq
DB search
MVHFTDPVHGSGEEEETIEIIINIIDMNDNEPVFEQTSYVGEVAESSPKGTTVIRVKATD
ADEPGYYYSIVKYTILSQEPKLPSDHMFVINTVNGAIMVEDAGLDRETYPEYTLEIQAAD
LRGEGLTGKTKVVLKVTDSNDNAPVFTESTYRGSVDENAVGVQVVKLSVTDKDEQNTPAW
NAKFKIISGDPEKLFSIETGSNKQEGIIKTAQGLDFEKSRTHTLSVIVENDVPFAIQMTT
STATVVVTVKDINEPPVFKDQQMFVQKPEELPVNSVITNCEAKDPDFAHKNTVKYKIGSD
PAGWLNVDENTGLVTVKRLMDRESAFVKNDTYTALIIAYEDGVVPATGTGTLSITLEDVN
DNPPFIEERNITVCRDDSTPVLLTVTDKDGPRHSAPYNVMVHEISKPNWSVQMNRDKTGV
ELVLNSNVLSGTYPVILRVSDTDGLEQDYSIQAEVCNCVENERVCAPLRNSLGVVQGVVG
GILLLSGLYYCT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactttactgatcctgttcatgggtcaggggaagaagaggaaactatagaaatt
atcatcaacataattgacatgaatgacaacgaacctgtttttgaacagacatcctatgtg
ggagaagtagctgaatcctcgccaaaagggactacagtgatacgggttaaagccactgat
gctgatgagccaggatattattactcgattgtcaaatacactattctgagccaggaacca
aagctgcccagtgaccacatgtttgtcattaacaccgtcaatggagccatcatggttgaa
gatgctggtttggacagagagacgtatcctgagtacactctggaaatacaggcagcagat
ctgagaggagaaggattaactggaaaaacaaaagtagttttgaaagtgacggacagcaac
gacaacgctccagtctttactgaatctacttatcggggatcagttgatgaaaacgcagtg
ggggttcaggttgttaaattgtcagtaactgataaagatgaacagaacaccccagcatgg
aacgccaagttcaagattatcagtggagatcctgagaagttgttttccatagaaacagga
tccaacaaacaagaaggaatcatcaaaactgctcagggactggactttgagaaaagcaga
acacacactctatctgttattgtggagaacgacgttccttttgccattcaaatgaccacc
tccaccgccacagtggtggtgaccgtgaaggacatcaacgagcctccagtctttaaagat
cagcagatgtttgttcaaaagcctgaggagcttcctgtgaacagtgtgatcacaaactgt
gaggcaaaagacccagactttgcacataaaaacactgtcaagtataaaataggtagtgac
ccagcaggctggctgaacgttgacgagaatacaggcctggtgacggtgaaaagactcatg
gacagagagtctgcttttgtgaagaacgacacatacacagcactcatcattgcttatgag
gacggtgtagtcccagccacaggaactggaaccctgtccattacacttgaagacgtcaat
gataaccctccattcatcgaggagcgtaacattacggtttgcagagatgactcaactcct
gtgctgttgactgtaacagacaaagatggaccgcgtcattctgctccatacaacgtgatg
gtccatgaaatatccaaacccaactggagcgttcagatgaacagagacaaaactggagtt
gaactggttttaaattccaatgtgttgagtggaacttacccagttatcctgagagtttca
gacactgatggtttggagcaggactactccatacaagctgaagtgtgcaactgtgtggaa
aacgaaagagtgtgtgctccactgaggaacagtttgggcgtcgtccagggtgtagttggg
ggaatccttctgttatctggtttatactactgcacgtga
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