KEGG   Oryzias melastigma (Indian medaka): 112137670
Entry
112137670         CDS       T07439                                 
Name
(RefSeq) B-cadherin
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04371  Apelin signaling pathway
oml04514  Cell adhesion molecules
oml04520  Adherens junction
oml05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    112137670
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112137670
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    112137670
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    112137670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112137670
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112137670
   04090 CD molecules [BR:oml04090]
    112137670
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    112137670
Cell adhesion molecules [BR:oml04515]
 Cadherins
  Major cadherins
   112137670
CD molecules [BR:oml04090]
 Proteins
  112137670
SSDB
Motif
Pfam: Cadherin Cadherin_4 Cadherin_CELSR2_9th RET_CLD1 RibLong
Other DBs
NCBI-GeneID: 112137670
NCBI-ProteinID: XP_024115860
Ensembl: ENSOMEG00000004629
LinkDB
Position
LG24:23131090..23159718
AA seq 492 aa
MVHFTDPVHGSGEEEETIEIIINIIDMNDNEPVFEQTSYVGEVAESSPKGTTVIRVKATD
ADEPGYYYSIVKYTILSQEPKLPSDHMFVINTVNGAIMVEDAGLDRETYPEYTLEIQAAD
LRGEGLTGKTKVVLKVTDSNDNAPVFTESTYRGSVDENAVGVQVVKLSVTDKDEQNTPAW
NAKFKIISGDPEKLFSIETGSNKQEGIIKTAQGLDFEKSRTHTLSVIVENDVPFAIQMTT
STATVVVTVKDINEPPVFKDQQMFVQKPEELPVNSVITNCEAKDPDFAHKNTVKYKIGSD
PAGWLNVDENTGLVTVKRLMDRESAFVKNDTYTALIIAYEDGVVPATGTGTLSITLEDVN
DNPPFIEERNITVCRDDSTPVLLTVTDKDGPRHSAPYNVMVHEISKPNWSVQMNRDKTGV
ELVLNSNVLSGTYPVILRVSDTDGLEQDYSIQAEVCNCVENERVCAPLRNSLGVVQGVVG
GILLLSGLYYCT
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggtgcactttactgatcctgttcatgggtcaggggaagaagaggaaactatagaaatt
atcatcaacataattgacatgaatgacaacgaacctgtttttgaacagacatcctatgtg
ggagaagtagctgaatcctcgccaaaagggactacagtgatacgggttaaagccactgat
gctgatgagccaggatattattactcgattgtcaaatacactattctgagccaggaacca
aagctgcccagtgaccacatgtttgtcattaacaccgtcaatggagccatcatggttgaa
gatgctggtttggacagagagacgtatcctgagtacactctggaaatacaggcagcagat
ctgagaggagaaggattaactggaaaaacaaaagtagttttgaaagtgacggacagcaac
gacaacgctccagtctttactgaatctacttatcggggatcagttgatgaaaacgcagtg
ggggttcaggttgttaaattgtcagtaactgataaagatgaacagaacaccccagcatgg
aacgccaagttcaagattatcagtggagatcctgagaagttgttttccatagaaacagga
tccaacaaacaagaaggaatcatcaaaactgctcagggactggactttgagaaaagcaga
acacacactctatctgttattgtggagaacgacgttccttttgccattcaaatgaccacc
tccaccgccacagtggtggtgaccgtgaaggacatcaacgagcctccagtctttaaagat
cagcagatgtttgttcaaaagcctgaggagcttcctgtgaacagtgtgatcacaaactgt
gaggcaaaagacccagactttgcacataaaaacactgtcaagtataaaataggtagtgac
ccagcaggctggctgaacgttgacgagaatacaggcctggtgacggtgaaaagactcatg
gacagagagtctgcttttgtgaagaacgacacatacacagcactcatcattgcttatgag
gacggtgtagtcccagccacaggaactggaaccctgtccattacacttgaagacgtcaat
gataaccctccattcatcgaggagcgtaacattacggtttgcagagatgactcaactcct
gtgctgttgactgtaacagacaaagatggaccgcgtcattctgctccatacaacgtgatg
gtccatgaaatatccaaacccaactggagcgttcagatgaacagagacaaaactggagtt
gaactggttttaaattccaatgtgttgagtggaacttacccagttatcctgagagtttca
gacactgatggtttggagcaggactactccatacaagctgaagtgtgcaactgtgtggaa
aacgaaagagtgtgtgctccactgaggaacagtttgggcgtcgtccagggtgtagttggg
ggaatccttctgttatctggtttatactactgcacgtga

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