Oryzias melastigma (Indian medaka): 112137670
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Entry
112137670 CDS
T07439
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04371
Apelin signaling pathway
oml04514
Cell adhesion molecule (CAM) interaction
oml04517
IgSF CAM signaling
oml04518
Integrin signaling
oml04519
Cadherin signaling
oml04520
Adherens junction
oml05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112137670
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112137670
04517 IgSF CAM signaling
112137670
04518 Integrin signaling
112137670
04519 Cadherin signaling
112137670
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112137670
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112137670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112137670
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112137670
04090 CD molecules [BR:
oml04090
]
112137670
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112137670
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112137670
CD molecules [BR:
oml04090
]
Proteins
112137670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_CELSR2_9th
RET_CLD1
RibLong
Motif
Other DBs
NCBI-GeneID:
112137670
NCBI-ProteinID:
XP_024115860
Ensembl:
ENSOMEG00000004629
LinkDB
All DBs
Position
LG24:23131090..23159718
Genome browser
AA seq
492 aa
AA seq
DB search
MVHFTDPVHGSGEEEETIEIIINIIDMNDNEPVFEQTSYVGEVAESSPKGTTVIRVKATD
ADEPGYYYSIVKYTILSQEPKLPSDHMFVINTVNGAIMVEDAGLDRETYPEYTLEIQAAD
LRGEGLTGKTKVVLKVTDSNDNAPVFTESTYRGSVDENAVGVQVVKLSVTDKDEQNTPAW
NAKFKIISGDPEKLFSIETGSNKQEGIIKTAQGLDFEKSRTHTLSVIVENDVPFAIQMTT
STATVVVTVKDINEPPVFKDQQMFVQKPEELPVNSVITNCEAKDPDFAHKNTVKYKIGSD
PAGWLNVDENTGLVTVKRLMDRESAFVKNDTYTALIIAYEDGVVPATGTGTLSITLEDVN
DNPPFIEERNITVCRDDSTPVLLTVTDKDGPRHSAPYNVMVHEISKPNWSVQMNRDKTGV
ELVLNSNVLSGTYPVILRVSDTDGLEQDYSIQAEVCNCVENERVCAPLRNSLGVVQGVVG
GILLLSGLYYCT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactttactgatcctgttcatgggtcaggggaagaagaggaaactatagaaatt
atcatcaacataattgacatgaatgacaacgaacctgtttttgaacagacatcctatgtg
ggagaagtagctgaatcctcgccaaaagggactacagtgatacgggttaaagccactgat
gctgatgagccaggatattattactcgattgtcaaatacactattctgagccaggaacca
aagctgcccagtgaccacatgtttgtcattaacaccgtcaatggagccatcatggttgaa
gatgctggtttggacagagagacgtatcctgagtacactctggaaatacaggcagcagat
ctgagaggagaaggattaactggaaaaacaaaagtagttttgaaagtgacggacagcaac
gacaacgctccagtctttactgaatctacttatcggggatcagttgatgaaaacgcagtg
ggggttcaggttgttaaattgtcagtaactgataaagatgaacagaacaccccagcatgg
aacgccaagttcaagattatcagtggagatcctgagaagttgttttccatagaaacagga
tccaacaaacaagaaggaatcatcaaaactgctcagggactggactttgagaaaagcaga
acacacactctatctgttattgtggagaacgacgttccttttgccattcaaatgaccacc
tccaccgccacagtggtggtgaccgtgaaggacatcaacgagcctccagtctttaaagat
cagcagatgtttgttcaaaagcctgaggagcttcctgtgaacagtgtgatcacaaactgt
gaggcaaaagacccagactttgcacataaaaacactgtcaagtataaaataggtagtgac
ccagcaggctggctgaacgttgacgagaatacaggcctggtgacggtgaaaagactcatg
gacagagagtctgcttttgtgaagaacgacacatacacagcactcatcattgcttatgag
gacggtgtagtcccagccacaggaactggaaccctgtccattacacttgaagacgtcaat
gataaccctccattcatcgaggagcgtaacattacggtttgcagagatgactcaactcct
gtgctgttgactgtaacagacaaagatggaccgcgtcattctgctccatacaacgtgatg
gtccatgaaatatccaaacccaactggagcgttcagatgaacagagacaaaactggagtt
gaactggttttaaattccaatgtgttgagtggaacttacccagttatcctgagagtttca
gacactgatggtttggagcaggactactccatacaagctgaagtgtgcaactgtgtggaa
aacgaaagagtgtgtgctccactgaggaacagtttgggcgtcgtccagggtgtagttggg
ggaatccttctgttatctggtttatactactgcacgtga
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