KEGG   Oryzias melastigma (Indian medaka): 112137750
Entry
112137750         CDS       T07439                                 
Symbol
entr1
Name
(RefSeq) endosome-associated-trafficking regulator 1
  KO
K22938  serologically defined colon cancer antigen 3
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112137750 (entr1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oml03037]
    112137750 (entr1)
Membrane trafficking [BR:oml04131]
 Protein recycling
  Others
   Others
    112137750 (entr1)
Cilium and associated proteins [BR:oml03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   112137750 (entr1)
SSDB
Motif
Pfam: Sas-6_C_CC TolA_bind_tri TSC22 Baculo_F Trimer_CC GAS GIT_CC DUF3972 FapA ATG16 PMC2NT CLZ FUSC DUF4200 DUF6376
Other DBs
NCBI-GeneID: 112137750
NCBI-ProteinID: XP_024115981
Ensembl: ENSOMEG00000003540
LinkDB
Position
LG9:complement(12781220..12786274)
AA seq 302 aa
MSGQRRGKTLIITDDEEEEEEQADQLNPFSFREFMRWKTHDPDEEQDQNRVERDLPHLDV
DVSSCFLSETHLAPQEEEDWGRSFQSGVESTSSLCTEDDEEEEEETRFSSKPEGSTENYE
GDDETSLAEAAPSCRRRTPQMQQLKEENQALRRTLMELQRRAEADQRRVMQLTEELLQRR
RQEEKEAQDLENMVHSVEQNLQLMTKRAVKAENTVSRLKAELQQLQGEVQRLGSENSTLK
AAESQVVMTMRQNAQVASEYLNKTTSHAYSSIRQLMGEAETLRLVSQLLQSIDKISGVDA
ES
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtccgggcagagacgcggaaagacgttgataatcactgatgatgaggaggaggaggag
gagcaggcggaccagctgaacccgttctccttcagggagtttatgcgctggaagactcac
gacccagacgaggagcaggaccagaaccgagtggagagggacttgcctcacctggatgtg
gacgtcagcagctgcttcctgtctgagactcacctggcaccacaggaggaggaggattgg
gggcggagcttccagtcaggtgtggagagcacctcctccctgtgcactgaagatgatgaa
gaggaggaggaggagacccggttctcctctaagcctgaaggatccacagagaactatgag
ggagacgatgaaacctccctggccgaggcagccccctcctgcaggaggaggacacctcag
atgcaacagctgaaggaggagaaccaggctctgaggaggacgctcatggagctacagagg
agagccgaggctgaccagcgcagggtgatgcagctcacagaggagctgctgcagaggagg
cgtcaggaggagaaggaggcgcaggatcttgagaacatggttcactctgtggagcagaac
ctgcagctgatgacgaaacgagcagtcaaagcagaaaacacggtttccagattgaaggcg
gagcttcagcagctgcagggggaggttcagcgtctgggctcggagaacagcaccctgaag
gcagcagagtctcaggttgtcatgacgatgaggcagaacgctcaagtggcttctgagtac
ttgaacaaaacgacgagccacgcctactcctccatccgtcagctgatgggggaagcagaa
actctccgcctggtgtctcagctccttcaatccatcgataagatctcaggcgtggatgca
gagtcctga

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