Oryzias melastigma (Indian medaka): 112137807
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Entry
112137807 CDS
T07439
Symbol
prdm8b
Name
(RefSeq) PR domain zinc finger protein 8b
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112137807 (prdm8b)
03036 Chromosome and associated proteins [BR:
oml03036
]
112137807 (prdm8b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112137807 (prdm8b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112137807 (prdm8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
Zf-C2H2_ZNF451_C
zf-C2H2_2
DUF1835
DUF5810
Motif
Other DBs
NCBI-GeneID:
112137807
NCBI-ProteinID:
XP_024116073
Ensembl:
ENSOMEG00000023069
UniProt:
A0A3B3E235
LinkDB
All DBs
Position
LG9:11327642..11332364
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AA seq
569 aa
AA seq
DB search
MEESGSQKMVWDGDAKAVQQCLTDIFTSVFTTCDIPAHAIFGPCALSHTSLYDSIAFLAL
KSTDKRAAPYIFRVDTSAANSTSEGLMWLRLVQSARDKEEQNLEAYVKNGQLFYRSLRRI
EKDEELLVWYGADLIDLLLLSSSRAPAKSKASTHHTCPDCNQRFQFEFPFLAHLRFRCSK
RLQSSGSADEESSRDRGTEHTDSPPTRTSPKLGRSEGFGTPQDTTKPSTDFHNLARDLEK
NRTSPPSDKEAEICSESSGKRKFSDIDERESRRPGLPQTKSKDELEASAQNYRGAYSLEE
NQRSFSPPGSLDPGEAKRSAFTEVRKSPQNPKHHSSTRNLPSSNSENKEGGRPSGNPPEK
SLGIRQVLSETQPPQSLSLGSAFTSVSQQGGGSGGERKSAFSQPSRSFSQISPLVMPPKL
LDCHPAVGDTISSNRLYQADHLAAKLQGAELGANCPVPGAMGKQNPFVYATAFWPKNSGP
IQLQMPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYSMEPLVKR
RREEKLKCPICNESFRERHHLSRHMTSHN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtccggctcgcagaagatggtctgggacggggacgccaaagcggtgcagcag
tgtctcacggacatcttcacgagcgtcttcaccacgtgcgatatccccgcgcacgccatc
ttcgggccgtgcgcgctcagccacacgtccctgtacgacagcatcgccttcctcgcgctg
aagtccaccgacaagcgcgcggctccgtacatcttcagggtggacacgtcggcggccaac
agcacttcggaaggtctgatgtggctgcggctggtccagtccgctcgggataaagaggag
cagaacctagaggcctacgtgaagaacggacagctcttctaccgctccctccgccgcatc
gagaaggatgaggagctgctagtctggtacggtgcggacctgatcgacctgctgctgctc
agctccagcagagcccccgccaagagcaaagcctcaacccatcacacctgcccagactgc
aaccagcgattccagtttgagtttccctttttggcccacctgcgattccgatgctccaag
agactgcagagcagcggttcagcagacgaggagtccagcagagacagaggcaccgagcac
acagacagccccccaaccaggaccagcccaaagctgggccgctccgaaggctttggaacc
cctcaggacaccaccaagccctccaccgacttccacaacctggcccgggatctggagaag
aaccgaacgagcccaccgagcgacaaagaggccgagatctgcagcgagagctcggggaag
aggaagttctcggatatagatgaacgagaaagccgaagaccaggcctcccacagaccaag
tccaaagatgagctggaagcttctgcacagaactacagaggagcttacagcttagaggag
aaccagagatccttctccccaccaggttcgctggatcctggggaggccaagcgcagcgcc
ttcacagaggtcaggaagtcacctcagaatccaaaacaccacagcagcaccagaaacctc
ccgagctccaactctgaaaacaaagagggaggccgtcccagcgggaatcctcctgagaag
agcctgggcatcaggcaggtgctgtctgagacgcagccgccacaaagcctgtcgctaggc
agtgcgttcacgtccgtcagccagcagggcggcggcagtggcggggagaggaagagtgcc
ttcagccagccgtcccgctccttctcacagatttcccccttagtgatgcctccaaagctg
ctggactgccacccagcggtgggtgataccatctcctccaacagactctaccaggccgac
cacctcgccgccaagctgcagggagcagagctgggagccaactgcccggtgccgggtgcc
atgggcaagcagaaccccttcgtctacgccaccgccttctggcccaagaactctggaccc
atccagcttcagatgccctccgccctcactctgctgcccccctccttcacctccctctgc
ctgcccgcacagaactggtgcgctaagtgcaacgcctctttccgcatgacctcagacttg
gtttaccacatgcgttcgcaccataaaaaggagtactccatggagccgctggtcaagcgg
cggcgggaggagaaactcaagtgtcccatatgcaacgagtccttccgggagcggcatcac
ctgtcccggcacatgacctctcacaactga
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