Oryzias melastigma (Indian medaka): 112137810
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Entry
112137810 CDS
T07439
Symbol
elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112137810 (elp1)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
112137810 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112137810
NCBI-ProteinID:
XP_024116076
Ensembl:
ENSOMEG00000021054
LinkDB
All DBs
Position
LG10:complement(26786095..26797572)
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AA seq
1309 aa
AA seq
DB search
MRNLKLLKSLQSSDLQGLGSPQWVCVRADSGSLLVTSQFSILEFDPRSGQVLAEASLTAD
GFLPEDGGGTVVGLQDLADQESACLATATGDVLLFNLNTCQLECVGSVDSGLTAMRWSPD
EELVLLTTGQETIIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
RKIQEVEPAVPWDDRRPRVTWRGDGQLFAVSAVCPRTGARKVRVWNREGVLQATSEPING
LEQALCWKPSGSLLASSQRQPNKHSVVFLEKNGLLHGDFTLPFAKDQAKVKELLWNADSS
VLAVWLEDVTAEGAGGSSYIQLWTVGNYHWYLKQSLDFGADPQRAPVSVCWDPERPLRLH
VVTCSWTCITYDWSWTTDQSAGPDAADNASVAVIDGDKILVTTFRQTVVPPPMSSFQLQS
VSNINQVTFLCRPGGSNQLAALTSDGQVCLYTPDSDSGEAAGSADGFRTASRPLVLHRTF
RVAVSQPAPLALRQLLWLQDELFVSVTCGLLPGSSSLLMLRPDGDALVVRARVEVDGVVV
GVTHRSQTGTVALQLEDGRIRRLLWEGAELSVEEWRDSSGCSINFPVSCAQTALCSIRGE
EHLLGLSDRSHLYAGDTELASNVSSFAVCNDFLLLTTHSHSCRCLHLSALTLKGLQAALA
SDGDQNDETFRRVERGSRIVTVVPQDTRVILQMPRGNLECIHHRALVLAQIRKWLDGLRF
REAFECMRKLRINLNLMYDHNPPVFLENVETFITQLDSINHINLFLTELKEEDTTSSMYP
PPEGGPVRTRSESGPQKVDVVCGALLKAMESMDPQKFCLSILTAHVKKSVPELEVALQKV
HELRVNPPEAPGAVGAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPKEYL
PFLNNLKSLEPNYQRYTIDRHLKRYRKALLHLSKCGDEHFPEVLQLVTEQQLYAEALRLF
AAHSPQYKALSGAYAEHLVEQQQAEQAGLLLWRCGEPVRALQAFTSSSSWRNAICVAQEL
ALPPDQLALLARDLAEKLTEQRRYSEAALLLDQYAKDCEEAILALITGAAWEEALRLVHM
HDRQDITETNLKPVLLEAFSSQTAFLETQTATFTRHRSRLAVVRELKEKARLDMLDEDGP
DCPEAELYSEASSVMTASKYSQSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRALMYAL
SEIFTTVDKMREEVHSLLKALVLFHFDKQAQKLQLAFSEALQMMEGAVPEVWPEGGPTSQ
TPITGPNSTANSITASLQQQKPSASLPDPEVPAAPKMRNGVKWKLAVLS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctgaagctgctgaagagcctccagagctcagaccttcagggtctgggctcc
cctcagtgggtctgcgtccgggccgactccggctcgctcctggtcacctcacagttctcc
atcctagagtttgacccccgatccggacaggtcttggccgaagcctccctgactgcagac
gggttcctccctgaggacggcggcgggacggtggtcgggctgcaggacctggctgatcag
gagtccgcctgtttggccacggcgaccggagacgtgctcctcttcaacctcaacacctgc
cagctggagtgcgtcggcagtgtcgacagcggcctcaccgccatgaggtggagtccagac
gaggagctggttcttctcaccacaggtcaggaaaccatcatcatgatgaccaaagacttt
gagccgatcacagaggtgggaatccaccaggacgacttcggtgaagggaagttcatcacg
gtgggatgggggaagaaggagacgcagttccacggctcggaggggaagcaggcggcgcag
aggaagatccaggaggtggagccagcggttccctgggacgaccgcagaccgcgagtcacg
tggcgaggagacggtcagctcttcgccgtcagtgccgtctgtcctcggaccggagccagg
aaggtccgggtctggaaccgggagggggtcctgcaggccaccagcgagcccatcaacggg
ctggagcaggcgctgtgctggaagccgtccggcagcctcctcgccagctcgcagcgccag
cctaacaagcacagcgtggtgttcctggagaagaacggactcctgcacggagacttcact
ctgcctttcgccaaagaccaagctaaggtgaaggagctgctgtggaacgccgattcctct
gtcctcgccgtctggttggaggacgtaaccgccgagggcgccggcggcagcagctacatc
cagctctggacggtggggaattaccactggtacctgaagcagagcctggacttcggcgct
gacccacagagagctccggtctctgtgtgctgggatccagagcgccccctacggctccac
gtggtgacgtgcagctggacttgtattacctacgactggagctggacgaccgatcagagc
gccggaccggacgccgccgacaacgccagcgtggccgtgatcgacggagataaaatcttg
gtgacgaccttcaggcagactgtagtcccgccccccatgagttcattccagctccaatca
gtgtccaacatcaaccaggtgaccttcctgtgtcgacctggagggtccaatcagctggcg
gcgctcacctctgacggacaggtctgcctctacaccccagattctgattcaggtgaagca
gcaggatctgcagacggcttcaggacggcgtcccgtcctctcgtactgcacagaaccttc
agagtggcggtctctcagcccgcccccctggcgctgcggcagctgctgtggctgcaggat
gagctgtttgtgtccgtcacctgcggtctgctgccaggctcctcctccttgttgatgctg
cgccccgatggagacgctctggtggtcagggcgcgtgtggaggtggacggcgtggtggtc
ggcgtcactcaccgctctcagacgggaacggtggctctgcagctggaggacggacggatc
cggaggctcctctgggaaggagcggagctgtcggtggaggagtggcgtgactccagcggt
tgcagcatcaacttcccggtttcctgcgctcagacggctctgtgctccatccgtggagag
gaacacctgctcggcctctcggacagatctcacctgtacgccggggacacggagctggcc
tccaacgtgtcctccttcgccgtctgcaacgacttcctgctcctcaccacgcactcgcac
agctgccgctgtctgcatctgagcgcgctcacgctcaaagggctgcaggcggctctggcc
tcggacggagatcagaacgatgagacgttcaggcgagtggagcgaggatccaggatcgtc
accgtggttcctcaggacaccagagtcatcctgcagatgcctcgggggaacctggagtgt
atccaccacagagctctggttctggctcagatcaggaagtggctggacggcttaaggttc
agagaggccttcgagtgcatgaggaagctgcggatcaacctgaacctcatgtatgatcat
aatccaccggttttcctggagaacgtggagaccttcatcacccagctggactccatcaac
cacatcaacctgtttctcactgagctgaaagaggaagacacgaccagcagcatgtacccg
ccccctgagggcggcccggtccggacccgcagtgagtctggaccccagaaggtggatgtg
gtttgtggagctttactgaaggccatggagtcgatggatccacagaagttctgtctgtcc
attctgaccgcgcacgtgaagaagagcgtccccgagctggaggtggctctgcagaaggtc
cacgagctgcgagtgaaccctcctgaagctccgggcgccgtcggcgctgaagaggctctg
aagtacctcctcttcctggtcaacgtcaacgacctgtacgaacactctctgggaacgtac
gacttcgatctggttctgatggtggcagagaaatctcagaaggaccctaaggagtacctc
ccgttcctgaacaacctgaagagcctggagccaaactaccagcgctacaccatcgacaga
cacctgaagcgctacaggaaggccttgcttcacctcagcaagtgcggagacgagcacttc
cctgaagtgctgcagctggtgacggagcagcagctctacgctgaagctctgcgtctgttc
gccgcccacagtcctcagtataaggctctgagcggcgcgtacgccgagcacctggtggag
cagcagcaggcggagcaggccggcctgttgctatggcgatgcggggagccggtcagagcc
ctgcaggcgttcaccagcagctccagctggaggaacgccatctgtgtggcccaggagctg
gcactgccgcccgaccagctggctctgctggccagggacctggcagagaagctgacggag
cagaggcgctactcagaagctgctctgctgctggaccagtacgccaaagactgcgaggag
gccatcctggctctgatcaccggagcggcgtgggaggaggcgctcaggctggttcacatg
cacgacaggcaggacatcaccgagaccaacctgaagccggtgctgctggaagcgttcagc
tctcagacggcgtttctggagacgcagacggcgaccttcacgcgccacaggagccggctg
gccgtcgtccgcgagctgaaggagaaggcccggctggacatgctcgatgaagacggtcca
gactgtccagaagcagagctgtactctgaagccagcagtgtgatgacggcctccaaatac
tcgcagagcaactcccgcatttcctcgaggtcgtcaaagaaccgccgcaaagcggaaagg
aagaagctgagtctgaaggaaggaagcccgatggaggacagggcgctgatgtacgccctg
agcgagatcttcaccaccgtggacaagatgagggaggaggtccacagcctcctgaaggca
ctggttctcttccactttgacaaacaggcccagaagctgcagctggccttcagtgaagct
ctgcagatgatggagggggcggttccggaggtgtggcctgagggcgggccgaccagccaa
accccgatcactggaccgaactccaccgccaacagcatcacagcctccctccagcagcag
aagccctcggcgtcgctgccagatcctgaagttcctgcagcgccgaagatgagaaacgga
gtcaagtggaagctggcagttctaagctaa
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