Oryzias melastigma (Indian medaka): 112137816
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Entry
112137816 CDS
T07439
Symbol
trappc11
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112137816 (trappc11)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112137816 (trappc11)
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GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
112137816
NCBI-ProteinID:
XP_024116088
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Position
LG10:26016670..26031746
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AA seq
1124 aa
AA seq
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MMAGSQWELPPELCCRPMAFVALTGLDVVYNAVHRAIWDAFCANRRADRVPISFKVLPGD
HEYPKCRTKRTSYEWYIPKGILKTGWMNKHLNLVPALVVLFYELDWDDPQWKEKQSECAT
KVEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDLVASERAQALCTACDLSGKSLFVLPHTD
HLVGYIIRLENAFYEHAQTYYYTEVRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQD
TQNALKYYRTAYSLVHELRAHETNMLEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHM
DQCKKKIGCAELAFEHSAWMSKQFQSFGELFDEAIKLGLAAIQTQNPGFYYQQAACYTQD
RKQLAHQLCQAGASYPSPDPLDTQSGGLDFYGQRPWRQGHQSIDPQDAEKEKVGILALQI
KERDVPHSELIIALLGNAVAQFKKYKCPRMKSHLMVQMGEEYYHAKDYTKAFKLLDYVMC
DYRTERWCALLTDILSTALRCAYLMASVKDYILYCMELLGRASELNEEQKSRIEKNLLKV
LMNDVPDPEPDCDPSSVSTARSLWTDRMALAGSNEMTIEVQDYIPFIQCKAKFQSPSFHV
DQPIQLQVFVRADCPHPVSFNKLSVSLSNQEYNQWCVAESSGQDDMTLLPGKPKCFSFSF
VAKTEDVGKKIEMTGIELMMGSDTGRCVFLSWRGAGGDAASAHEALQASRSSRRWGRANE
ALPELDWDGITLQHSTMIISRIPKISVVLSHQPPILTNEMYCIRLAVQSQEDAVATDVKL
TTGLKPGQDANLSQTTHVTLDGSTVCDDSAASLLPDVPLGDLQPGGTLEKCIYFRCGSTG
PRVFLFQVAYSIDTAVEGRQIICKCHKDETVTIDTLVPFDVSVKFVSTKFEPLDRVAVDI
PFLLLTDVVSSSPWPLLLVSSSLQLLSLTSNTPQLQSQLQEVVLQTSECASECFCLRCPA
GTNNNNTVATGQYLISWRRQSSSPDGPLIQTTVTLPHIILELVPVYIYAELPSFGRVRES
LPVRYHIENRTPLMQEVEMAVEPSDAFMFSGLKQVRLRILPGTEQQMLYNYYPLMAGYQT
LPQLNINLPRCQTSNTQALKRFLPQRIFVKPQGRQPEDASIAAA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatggctggttcccagtgggagcttcccccggagctgtgctgccggcccatggctttt
gtggccctgacgggtctggatgttgtgtacaatgctgtgcatcgggccatctgggatgct
ttctgtgccaaccgccgagctgacagagtccccatctccttcaaagtcctcccaggagat
cacgagtatcccaaatgtcgcaccaagcggacgtcttatgagtggtacatccccaaaggc
atcctgaaaacaggctggatgaacaagcatctgaacctggttcctgctctggtagtttta
ttttacgagctggactgggatgatccgcagtggaaggagaaacagtctgaatgtgcgact
aaagtggagattgtcaggaccagtctccagggccggaacaccaaagtggccgtggtttta
atccaaaagaaaactcctttacctccaggtgaggacctggtagcatcagagagagcacaa
gctctgtgcaccgcctgtgatttgtccggcaagagcctctttgttctgccgcacaccgac
cacctggtgggctacataatcaggttggagaacgccttctatgagcacgctcagacgtac
tactacacagaggtccgtcgggtcaaatcacacaaggagttcctcaacaaaacgacacac
cagctgctgtttgtcagacatcagtttaaaatcgccttcttcagtgaactcaagcaggac
acccagaatgctctcaaatactacagaacggcgtacagcctcgttcacgagctccgagcg
cacgagaccaacatgctggagatcaaaaccatggctggattcatcaactataagatctgc
cgcctgtgtttccagcacaacactcctctggatgctatcgctcagttcaggaaacacatg
gatcagtgtaagaagaagatcggctgcgctgagctggccttcgagcactctgcgtggatg
tccaagcagttccagtcgttcggcgagctgttcgatgaggccatcaaactgggtctggca
gctatccagacccagaaccctggtttctactaccagcaggccgcctgttacacccaggac
aggaagcagttggctcatcagctctgccaggccggagcaagttatccttctcccgatcca
ctggacacccagagcggagggctggacttctacggccagagaccctggagacaaggacat
cagagtatcgacccgcaggatgcagagaaagagaaggtgggaattctcgccctgcaaatc
aaggaaagagacgtaccgcattctgagctgatcatagcgctcctcggtaacgctgtggcc
cagttcaagaagtacaagtgccctcgtatgaagagtcacctgatggtgcagatgggagag
gaatactaccatgcgaaagattacaccaaagcctttaagctgctggactacgtcatgtgt
gattatcgcacggagcgatggtgcgctctgctgaccgacatcctgagcacggctctgcgc
tgcgcttatctgatggccagcgtgaaggactacatcctctactgcatggagctgctgggc
agagcttctgaattgaatgaggagcagaagtcgaggattgagaagaacctcctgaaagtt
ctgatgaacgacgtgcccgaccccgagccagactgtgatccgtcttctgtcagcactgcc
aggtcgctgtggaccgaccgcatggctctggccgggtccaacgagatgaccatagaagtt
caggactacatccctttcatccaatgcaaggcgaaattccagtctcccagcttccatgtg
gaccagcccatccagctgcaggtcttcgtccgggccgactgtcctcatcccgtgtccttc
aacaagctgtcagtcagcctgagcaaccaggagtacaaccagtggtgtgtggccgaatcg
tcgggtcaggacgacatgacgctgttgccggggaaacccaaatgcttcagtttcagcttc
gtggcaaagactgaagatgttgggaagaagatcgaaatgacgggcattgagctgatgatg
ggcagcgacaccggccgctgcgtgttcctgagctggagaggggcgggcggagacgccgcc
tccgctcacgaagcgctgcaggccagcaggtcctcgcggcgctggggccgcgccaacgag
gcgctcccggagctggactgggacggcattactctgcagcacagcaccatgatcatctcc
agaatcccaaagatctctgtggtcctgagccaccagcctcccatcctcaccaacgagatg
tactgcatccgtctcgccgtccaatcacaggaggacgctgtggccacagacgtcaagctg
acgacgggtctgaagccaggacaagacgccaacctcagccagaccacccacgtgaccctc
gacggctccacggtttgtgacgattctgctgcttcactgcttcccgatgtgcctctgggg
gacctgcaacccggcgggacgctggagaaatgtatctacttccggtgtgggtccaccggg
ccccgggtcttcttgttccaggtggcctacagcatagacacggcagtggaaggacggcag
atcatctgcaaatgtcacaaggatgagacggtcactatcgacacgctggttccttttgac
gtatccgtcaagtttgtgtccactaagtttgagccgctggaccgggtcgccgtggacatt
cccttcctgctgctgacggacgtggtttcctcgtctccgtggccgctcctgctggtctcc
tcgtctctgcagctgctctctctgaccagcaacacgccgcagcttcagtcgcaacttcaa
gaagtggttctgcagacgtccgagtgcgccagcgagtgcttctgtctgcgatgtccagca
gggaccaacaacaacaacaccgtggccacaggacagtacctcatctcctggaggaggcag
tcttccagcccagacggtcctctcatccagacgacagtcactctacctcacatcatcctg
gagttggttcctgtctatatttatgcagagttgccgtcgttcgggagagtcagagagtcg
cttccagtccgctaccacatagagaaccgaacgcctctgatgcaggaagtggagatggcc
gtcgaaccgtcggatgccttcatgttctctggactcaaacaggtgcgtcttcgtattctc
ccgggcacagagcagcaaatgctgtataactattaccccctgatggctgggtaccaaaca
ctaccacagctcaacatcaacctgccacgctgccagacctccaacacacaagcactaaaa
cgcttcctgccacaacggatcttcgtaaagcctcagggtcgacagccagaggacgcctcc
attgctgcagcttga
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