Oryzias melastigma (Indian medaka): 112137819 Help Entry 112137819         CDS       T07439                                  Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     112137819  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:oml01009]     112137819   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oml04515]     112137819 Protein phosphatases and associated proteins [BR:oml01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      112137819 Cell adhesion molecules [BR:oml04515]  Cadherins   Protocadherins    112137819 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Cadherin_4 Motif Other DBs NCBI-GeneID:  112137819 NCBI-ProteinID:  XP_024116092 Ensembl:  ENSOMEG00000022101 LinkDB All DBs Position LG10:28337351..28501442 Genome browser AA seq 1248 aa AA seqDB search MLLSGEVMAVLRWGCVLLLSITLMVPCGAVSSNHKFRVAEEQPPNTMIGSLAADLGLPES GHLYKLEVGSPYLRVDSRTGEIYTTEIPIDRETLKDCRNLFSDDPCFLEFEVSITDMAKG ISSSPRLIEGIIEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGSNGVAE YTLTTGPDANQLFGLQIFDDGEEKVPQVIVQGTLDREKKDSYDLNIRVVDGGKPPRASSA LLRITVTDQNDNAPKFEKSLYEAELPENSPPGHSVLQVRANDADTGANGEIDYSFHQASD IVQRLLRIDRSTGIIYVKGLVDREEVNLLKFYVTARDRGPNSKSSKAQVTINIKDQNDNA PAIEIRGIGLVIHQNSAANISEDMPIGTPVALIQVSDLDEGENAVVTCVVAGDVPFQLRP ATELANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTP NFSPALLEVSFAEDNQPGDKVIDVVATDADSGVNAELVYSIIEPSAANLFEINPNTGEIR VRNQLDREDVELYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENM PPLNPVGVVTVSDADKGENSQVTLFVEPDNGKFIIQNGTGTILSSISFDREKESTYTFRL KAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVKAEDID AGLNAELYYTITGGNPHGLFEISHSSGEIKLAQGFTGKHKGLHRLVVKVSDKGKPPRHTT ALVHVYVNETTNNVSLIEGLVGHSLYTPLDRDIAGDPNYDPAQQSNIVYGSLAGIAGVIL IIVAVVVIRYWLQNDTKSGYQAGKKENKDLYAPKQGPKNGKGKKSKKNKAPKQPKQLEED EEASLQKGFGFNHIKENLNDSPRILLPLNRQPGSPDLGCHYRSNSPLPSIQLQPQSPSAS KKHLAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTSNQAQ DLQDASQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENGE DGEMEPRMEGGTFKRPRHMSEFMSEHAEAIRNLRPLPDVAMTGNCTRECTEFGHSDSCWM PGQPSPTRKVSKSAPKLSTFVPYQEMDGQEQLMANGSPKPMVTEERGGAGGSGPKVANMR FMTPYSSAYPGGGASSGKDCGLEEIPLSQAVEYHSATTPTGQKREIYL NT seq 3747 nt NT seq  +upstreamnt  +downstreamnt atgctgctgtctggagaagtcatggctgttctgaggtggggatgtgtgctgctcctgagc atcacgctgatggttccttgcggcgccgtctcctctaaccacaagtttagagtggcagag gagcagccgcccaacactatgatcggcagcctggcggcagacctcggcctacccgaatcc ggacacctgtataagctggaagtgggctcgccgtacctgagggtggacagcaggaccggt gaaatctacaccacagagatccccattgaccgagagactctcaaagactgccgtaacctg ttctcagacgacccatgcttcctagagtttgaggtgtcgatcacggacatggcgaagggg atcagctcgagcccgcggctgatcgaaggcatcatcgaggtgctcgacatcaacgacaac acaccgcagttctcctcgcccatcctcacactctccatccccgagaacacgcacaccggt accctcttctccatccccgtcgcggtggacagggactcgggatccaacggcgtggcggag tacactctgaccaccggtccagacgccaaccaactctttggcctgcaaatctttgacgac ggggaagaaaaagtcccgcaggtgattgtccaggggaccctggaccgcgagaagaaggac tcgtatgacctgaacatccgagtggtggatggtgggaagccaccgagagcaagcagcgct ctgctgagaatcacagtgacggaccagaacgacaacgcgcccaagtttgagaagagccta tacgaagcggaacttccggagaacagtccacctggacactccgtgctgcaggtgagggcc aacgacgccgacaccggtgccaacggagagatcgactacagttttcatcaggccagcgat attgtccagagactacttcgcattgaccgctccacaggcatcatctacgtcaagggtctg gtggacagagaggaggttaacctgctcaagttctatgtgacggccagagatcgggggcca aactccaagagttctaaggctcaggttaccatcaatatcaaggaccagaacgacaatgca ccggctatcgagatccgaggtattggtttggtcattcaccagaactctgcggccaacatc tcagaggacatgccgattggcacacccgtggccctgattcaggtgtctgacctcgacgag ggggaaaacgcagtggtgacctgtgtggtggccggagatgtgccatttcagctccggcct gcaaccgaattagccaacgatcgaaagaggaaatacttcttgcagacaacaaccctgctg gattatgaacgcattaaggattacaggattgaaatagttgccgtggattctgggaaccca gctctgtccagcaccaactcccttaaagtccaggtcacagacataaacgacaacacaccc aacttctccccggcattgctggaggtgagctttgcagaagataaccaacctggtgataaa gtgattgatgttgtggcaacagacgcagacagcggcgtaaatgcagagctggtctacagc atcatcgagccgtcagccgccaacctctttgagatcaatcccaacactggagagatccgc gtgaggaaccagttggatcgtgaagacgtggagctctacgagtttggcgtggctgcggca gacaaaggcgttccaagtaaaactgggactgcaatagtggtgataaatgttgaagaccga aacgacaatgacccaaagttcatgctaagtggctacagtttctccgtcaatgagaacatg cctccactcaatcctgttggtgtggttacggttagtgatgccgataagggggagaattct caggtgactctgtttgtggagccagacaacggcaagttcatcatccaaaacggcacagga accattctctccagcatctcttttgaccgtgaaaaggaaagtacctacaccttccggttg aaagctgttgatgccggtgatccccctcgatcctcctatgttggtgtaactatcaacgtc ctagatgagaacgacaatgccccctacgtcaccaaacctgccaactcctcctacacacac ctgaaaccaagctccccgccagacactcctgtggaggtggtgaaagctgaggacattgat gctgggctcaacgctgagctgtactacaccataaccggaggaaatccccacggcctcttt gagatctcacacagcagcggagagatcaaactggctcagggattcaccggcaagcacaag gggctccaccgcctcgtcgtgaaagtcagcgataaaggcaagcctcctcgccacaccacc gccctcgtccacgtctacgtcaacgagaccaccaacaacgtgtccctcatcgagggactg gtcggccacagcctctacacgcctctggacagagacattgctggagatcccaactacgac cccgctcagcagagcaacatcgtgtacggcagcctcgcagggatagcgggtgtgatcctg atcatcgtggccgtggtggtcatcagatactggctgcaaaacgataccaagagtgggtac caggctggcaagaaggagaacaaagacctttatgctcccaagcagggtccaaagaacggc aaagggaaaaagagcaagaagaacaaagctcccaaacagcccaagcagctggaggaggac gaggaggccagcctccagaaaggcttcggcttcaaccatatcaaagagaaccttaacgac agtcccagaattctgttgcccctcaatcgccaacccggaagccctgatctgggctgccac taccgctctaactcccccctgccgtccattcagttgcagcctcagtccccctcggcctcc aagaagcacctcgccgttcaggaccttcccgccaccaacaccttcgtaggaacaggcgac aacaactccacaggctctgaccaatattcggattacagctacaaggccaatccacccaaa tacagcaacaaacagcttcctcaccgccgggtcaccttctccacgtccaatcaggcgcag gatctgcaggacgcatcccagcacagctactacgacagcggcctggaggagtcggagacc cccagctccaagtcgtcgtccgggccgcggatcgggccgctggctctgccggaggaccac tacgaacggaccacgcccgacggcagcatcggcgagatggaacacccggagaacggagag gatggagagatggagccacggatggagggagggacttttaagagaccgcgacacatgagc gagttcatgtctgagcatgcagaagcgataagaaacctcaggcctctccccgacgtggcg atgaccggtaactgcacccgcgagtgcaccgagttcggccactccgactcctgctggatg cccggccagccgtcccccacccgcaaggtgtcaaagagcgcccccaagctctccaccttc gtgccttaccaggagatggacgggcaggagcagctgatggccaacgggagccccaaaccc atggtgacggaggagcgcggcggagccgggggcagcggccccaaggtggccaacatgagg ttcatgacgccctacagcagtgcctacccagggggcggggcctcctctggcaaagactgt gggctggaggagatcccgctgagccaggcggtggagtaccactcagccaccacccccacc ggccagaagagggagatctacctgtga

DBGET integrated database retrieval system