Oryzias melastigma (Indian medaka): 112137872
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Entry
112137872 CDS
T07439
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
112137872 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112137872 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112137872 (g3bp1)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112137872 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
112137872 (g3bp1)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112137872 (g3bp1)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112137872 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
112137872
NCBI-ProteinID:
XP_024116175
Ensembl:
ENSOMEG00000021702
LinkDB
All DBs
Position
LG10:27575007..27580781
Genome browser
AA seq
485 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGVDGNGKPLEPVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNLQPMRKFMQTFVLAPEGTV
PNKFYVHNDVFRYQDEVFADSDSELPEESEDEDLERAPSPDTAEEPAPFYDPTSCSSEPT
APGDNEEGGASPEPEVEKDLEAPEAERQADTHDGRTETHSADEQTEKRSSSPAPPTTEPA
SAPAEPAPSAPEENRPFSWASVTSKNLPPSGAIPVSGINPHVVKVAPTAPVRTEVKPESQ
TAQRTQREQRPRDQRPGGPTPPHRGGPRPAREGEQGEPEGRRIIRYPDAHQLFVGNVPHD
VDKNELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILNNKPIKFRGDIRLNV
EEKKTRSAREGDRRDSRPRGPGGPRERIGGGPRGPPTRGGMSQKPSFGSGRGAGPSEGRF
SAPRQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acgctcctgaaccaggcccccgactacctgcacaggttttatgggaagaactcgtcgtac
gtgcacggcggtgtggacggcaacggcaaaccgctggagccggtttatggacaatctgag
atccataagagggtgatggctctgagtttccgggactgtcacacaaaaatccggcacgtg
gacgcgcacgccaccctgaacgaaggcgtggtggtgcaggtgatgggcgagctctccaac
aacctgcagcccatgaggaagttcatgcagaccttcgtcctggctcctgagggtacagtc
cccaacaagttctacgtccacaacgacgtgttccggtaccaggacgaggtgtttgccgac
tccgactcggagcttcctgaagagtcagaagacgaggatctggagagggccccctccccc
gacaccgccgaggagcccgcccccttctacgaccccacatcctgcagttctgagcccaca
gcccccggtgacaatgaggagggaggggccagtccagaaccagaggtcgagaaagacctg
gaggctccagaagcggagcgtcaggcggacacccacgacggccggacagaaacgcactcg
gctgacgagcagacggagaagaggtcgtcctccccggcaccgcccaccacagaaccagct
tcggcgccggccgaacccgctccgagcgccccagaagagaacaggccgttctcctgggcg
tcggtcaccagtaagaacctcccccccagcggcgccatcccggtgtcaggaatcaacccc
catgtcgtcaaagtcgcccccacagcccccgtgagaacagaagtgaagcccgagtctcag
acggcgcagagaactcagagggagcagaggccgcgcgaccagagacccggcggacccaca
cccccgcaccggggcgggcctcgaccagctcgagaaggcgagcagggcgagccggagggg
cgccggatcatccgctaccccgacgcgcaccagctcttcgtgggaaacgttccccacgac
gtggacaagaacgagctgaaggagttctttgaacagtacgggacggttctggagctgagg
atcaacagtggcgggaagctgcccaacttcggcttcgtggtgttcgacgactctgagccg
gttcagaagatcctcaacaacaagcccatcaagttcagaggagacatccggctgaacgtg
gaggagaagaagacgcgctccgccagggagggcgaccggcgggactccaggccccgaggt
cccggcggtcccagagagcgcattggcggcggacccagaggaccgcccacccgcgggggg
atgtcccagaagcccagctttggctccgggaggggggcgggccccagcgagggccgcttc
tcggctccccgtcagtga
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