Oryzias melastigma (Indian medaka): 112137969
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Entry
112137969 CDS
T07439
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X3
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112137969 (lcmt2)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
112137969 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
112137969 (lcmt2)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112137969 (lcmt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_5
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Kelch_1
Motif
Other DBs
NCBI-GeneID:
112137969
NCBI-ProteinID:
XP_024116262
Ensembl:
ENSOMEG00000019591
UniProt:
A0A3B3DTP2
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Position
LG21:complement(15084266..15105673)
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AA seq
682 aa
AA seq
DB search
MSATGGKLRKKSSDVAVQGTNDSSVLSKASAAARGYFRDVFIQHFVCKVVRRSPLINRGY
YVRWRAVDHCVRRFLQTTDCCPRRQILSLGAGFDSLFFRLHADALLDRASVFELDFPDVA
HRKAALISSSEPLKERLDCFSPPLPGPIHLSSSHYQLVGVDLRDQKQVEAALRAAGMDWA
APTLILSEVVLTYMETQRSDAIISWAAKLLPQSLFVMYEQVRPHDPFGCIMQEHFLKMNS
PLHALTQYPDISAQRQRFLDKGWQQSMCLDMNQFYFGLVSEEERDRVESLEPFDEYEEWH
QKCSHYFILTASAGALMDQALLVPRTKLRPSPVASPGQPPSSVPSCRARPIPTCVEGLGM
ASSCLWGGYILLTGGISRTGRGAETRVLLRDQEGWSMVCTEQSAGPGMRLHHSATPLPGG
AVLLYGGRSSPLRPVTDLLRVSFQPCSPALGAQKIQVEPLTCTGDSPPPRWRHTAAAVRH
RDRDFLFVFGGKNQSERALGDIGFLCLDDLHWTQVPVEGVTPAPRHSHSACSYEGGVLVF
GGLGEGGAPLGDISVLGQTERGFCWERIDVHPPPEPRYSHRAHVVGQKLLVVGGVWMFSE
GVPGLAVIDLATCTSVEFSLDTASVPHPLMLHSFCSELTASEEPELLLMGGGGNCFSFGT
HWNRHLVSVELPAVLTLSTVAS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgacaggcgggaaactgcggaagaagagcagcgacgtagcagttcaaggaacc
aatgacagcagcgtgctcagcaaggcgtcggctgcagcgcggggctacttcagggacgtc
ttcatccagcactttgtgtgcaaagtggtcagaagatctcctctcattaacaggggttat
tacgtgcgctggcgagccgtggaccactgtgtgcgaaggtttctgcagaccacagactgc
tgccccagaagacagatcctgtctctgggcgcaggcttcgactcgctgttcttccgccta
catgctgacgctctcctggacagggcctctgtgtttgagctggacttccctgatgtggct
caccgcaaagcagctctgatctcatccagtgagcccctgaaggagaggctggactgcttc
tcaccccctcttccaggacccattcatctgtctagcagtcactaccaactggtaggggtg
gatttacgggaccagaagcaggtggaggctgccctgagagccgcgggtatggactgggcc
gcccccaccctcattctgtctgaggtggtgctcacctacatggaaacccaacggtccgac
gccattatcagctgggcagccaagctcctcccacagtctctctttgtgatgtatgagcag
gttcgccctcacgatcctttcgggtgcatcatgcaggagcatttcctcaagatgaactca
cctcttcacgcgctgacgcagtacccagacatctctgctcagaggcagcgcttcctggac
aagggttggcagcagtctatgtgtctggatatgaaccagttctattttgggcttgtgtct
gaggaggagcgggaccgagtggagagcctggagccattcgatgagtacgaggagtggcac
cagaaatgctcccactacttcatcctcacagccagtgcaggtgcgctgatggatcaggcc
ctgctggttcctcgaacaaagctccgcccctcacctgtcgcctcaccgggccagccgcca
tcctccgtcccgtcctgcagagcccgtcccattcccacgtgtgtggagggcctggggatg
gcttcctcctgcctgtggggggggtacatactgctaacagggggcatcagcagaacaggg
aggggggcagagacccgggtgctgctcagagatcaggaggggtggagcatggtctgcacc
gagcagtctgcaggtccaggcatgcggctccaccattcggccacgccccttcccggagga
gccgtgcttctgtacggggggcgctcctcgccgctgcgtccggtcacagacctgctcaga
gtctcctttcagccctgcagccctgctctgggagctcagaagatccaggtggaaccgctg
acctgcacgggggattcgccccccccaaggtggagacatactgcagcggcagtcagacac
agagatagagacttcctgtttgtgtttggtgggaagaaccaatcagagcgggcgctggga
gacattggtttcttgtgtctggacgacctgcactggactcaggtcccagtggagggagtc
acaccggcgcctcgacactcccactcagcctgttcgtatgaggggggggtgctagtgttc
ggtggactgggcgaagggggggcgccgctgggcgacattagcgtgttggggcagacagaa
agaggcttctgctgggagaggattgatgtgcacccgcctcctgagccccgatactcccac
cgagctcatgtggtggggcaaaagctccttgtggtggggggggtgtggatgttctctgag
ggcgtcccgggccttgctgtgatcgacctggccacatgcaccagcgtggagttcagtctg
gacacggcgtccgtgccccaccctctgatgctgcactccttctgctccgaactcaccgcc
tctgaggagccagagctgctgctgatgggaggaggagggaactgcttctccttcgggact
cactggaaccgccacctggtcagcgtggagctcccagctgtcctgacactcagcactgta
gcatcatag
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