Oryzias melastigma (Indian medaka): 112138049
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Entry
112138049 CDS
T07439
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112138049 (nova1)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112138049 (nova1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
112138049
NCBI-ProteinID:
XP_024116378
Ensembl:
ENSOMEG00000015479
UniProt:
A0A3B3DLF7
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Position
LG14:complement(5918218..5966374)
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AA seq
503 aa
AA seq
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MMTAGGEGGGSAVDHNGMFSSASLDSPQHPHMDTENADSRKRPLDAPAEEAGCTKRTNTG
EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT
VEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGK
GGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS
CLNISYSNVSGPVANSNPTGSPYANTAEVLPNAAAAAATASSLLGQAGLTGMGAFPATMS
SFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLAS
YANDASSSAGHPATGLGGFSLGSLAAATGASNGYLNASSPLMASSLLATEKLADGAKDVV
EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA
QYLISQRITYEQGVRATNPQKVG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggccggtggagagggtggcgggtcagccgtggaccacaacgggatgttctcc
agcgcgagcctcgacagcccgcagcacccgcacatggacacggagaacgcggactcccgc
aagcggccgctggacgccccggcggaggaggccggctgcaccaagcgcaccaacaccgga
gaggagggcgagtacttcctgaaggtgctgatccccagctatgcggcaggctctataatt
ggcaaggggggccagaccatcgtacagctgcagaaagaaactggtgccaccattaagctg
tccaaatccaaagacttctacccaggtacaacagaacgagtctgtctgatacaggggacc
gtggaagctctcaacagtgtgcacaacttcatcgcggagaaggttcgtgagatgccccag
agcgcccaaaagccagaacccgtcagcatacttcaaccacagaccacggtgaatcctgac
cgcgtcaaacaggccaaactgatcgtgcccaacagcacagctggactcatcatcggcaag
ggtggagccacagtcaaagcggtgatggagcagtcaggggcatgggtgcagctctcccag
aagccagagggcatcaacctgcaggagcgagtggtcaccatcagcggagaacctgagcag
aaccgtaaagctgtggaaatcatcgtgcagaaaatccaggaggaccctcagagcagcagc
tgcctcaacattagctactccaacgtctccggcccggtggccaactccaaccccacgggc
tcgccctacgcaaacacggccgaggtgctgcccaacgcagctgcggccgccgccacggcc
tccagccttctgggtcaggctggactgacagggatgggggcctttcctgccaccatgtcc
agtttctccggcaacgacctgctggccatcacctcagccctgaacaccctggccagctac
ggctacaacactaacaccctgggcctgggcctcaaccctgcagccgcctctggagttctg
gccgcagttgcagccagtgctaacccagctgcagctgccgcagccaacctgctagcctcc
tacgctaacgatgcctccagcagcgcgggccacccggccaccggcctcggcggcttctcc
ttgggttcactagctgctgctaccggggcttccaacggttacctgaatgcttcgtcccct
ctgatggcctcgtctcttttggcaacagagaagctggcagacggggccaaggacgtggtt
gaaatagccgtcccagagaatctggtgggtgccattctggggaagggcgggaagacgctg
gtagagtaccaggagctgacaggagcccgcatccagatctccaaaaaaggagagttcatt
cctggtactcggaaccgcaaagtaaccataacagggtcgccagccgctacacaagcagcg
cagtatctgatcagccaacggatcacgtatgagcagggcgtgcgtgctaccaacccacag
aaggtgggctaa
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