Oryzias melastigma (Indian medaka): 112138397
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Entry
112138397 CDS
T07439
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
oml04148
Efferocytosis
oml04218
Cellular senescence
oml04310
Wnt signaling pathway
oml04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112138397
04310 Wnt signaling pathway
112138397
04020 Calcium signaling pathway
112138397
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112138397
09143 Cell growth and death
04218 Cellular senescence
112138397
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112138397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112138397
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112138397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
112138397
NCBI-ProteinID:
XP_024116727
Ensembl:
ENSOMEG00000019626
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Position
LG11:complement(14307668..14329069)
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AA seq
843 aa
AA seq
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MKSAEEDAYGCTPNVSLSLPLGSPCLPSQYHSLQSSPILSVSATDSPSYDSQEEMGAATF
YSSVRPNGAPTLESPRIEITAYGQFPEDDVEESSLPVANRVNSIVTLTLPSTDGYRDPSC
LSPSSSISSRSGLSDASYESGFSYNIDNSPQNSPWQSPCVSPKGSTLTLPAVGSPRHTPS
TSPRTSVTEDSWTGQRGSRPISPYGSKRKYSFTGSHTPHRHFPYSPNHSPGPSLHTSPRL
SVTEDTWMPNTNQYTNSAILAAINALTTDGMNDLGEGIPVKARKTSQEHSPTVSLKVEPG
CDELSPEELCKDANPGVFQHLKKEDMLMDMHPFSWSNPKQYLSSSLPALDWQLPCSSGPY
SLQIEVQPRPHHRAHYETEGSRGAVKALAGGHPVVQLLGYMESEPLTLQLFIGTADDRLL
RPHAFYQVHRITGKTVSTSSHEAMHNNTKVLEIPLLPENNMRAVIDCAGILKLRNSDIEL
RKGETDIGRKNTRVRMVFRVHIHQATGRTVSLQVSSNPIECSQRSAQELPLVEKQNLESC
SALGGVKMLLEGHNFQHDSKVVFVEKAQDGHHLWESEARVERDPSKPNTLLVEIPPYRTQ
RLSAPVHVSFYVCNGKRKRSQHQRFTYVHPSVPTIKTEPHDDFSAPLMCTQQGSSKPFYA
LTSSSPDPRSCVVGGAYPVSQRRPTTKSPSLPFSGSQSPSPKLFELSSSPYSKCFSAAPS
VQTSGSPAPHVSIIQETSVHHHPPNLYPPNSSSSPPASQPSPPNDTPFSQNPGVTPSQPD
SSGSSIQEVPRKEVLSSVQKEGSPERMTVSIKKEPQELDQIYLDDVNEIIRNDLSAVSVQ
SQT
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcagaagaggatgcatatggctgcacgccaaatgtcagcctttccctccca
ctgggtagcccttgtctcccgtcccagtaccacagcctacagtccagccccattctctct
gtgtctgccactgactctcccagttacgactcccaagaagaaatgggagcagccaccttc
tattcaagcgtccgacccaacggcgccccgaccctggagagtcctcgtatcgagatcacg
gcctacggtcagtttcctgaggacgacgtggaggagagcagcctcccggttgccaacaga
gtcaactccatcgtgacgctgacgctccccagcacggatggttaccgggatcccagctgc
ctgagtccatccagcagcatctcgtctcgcagtgggctctctgatgcgtcctacgagtcg
ggcttctcctacaacattgacaattctccccagaactccccctggcaatccccctgtgtg
tcccctaaggggtccacgcttaccctccccgctgttggctcccctcgccacacgccctcc
acatcgcctcgtacgagtgtgacggaggacagctggacggggcagcggggctcgaggccc
atttcaccgtacggctccaagaggaagtacagcttcaccggcagtcacacgccgcacagg
cattttccctactcgcccaaccactccccggggccatccctccacacctccccccgcctc
agcgtcacggaggacacctggatgcccaacaccaaccagtacaccaactccgccatcctg
gcagccatcaacgccctgaccacggacggaatgaacgacctcggcgagggaatccccgtt
aaggcccgaaagacgagccaggagcacagccccaccgtcagcctcaaagtggagcccgga
tgtgacgaactgagtccagaggagctctgtaaagatgcaaaccctggtgtttttcagcat
ctgaagaaggaggacatgctgatggatatgcacccattctcctggtcgaacccaaagcag
tatctaagctcttctctgccggctctggactggcagttgccgtgcagctcagggccctac
agcctgcagatcgaagtgcagcccaggcctcatcatcgagctcattatgagacggaaggc
agcaggggggcagtaaaggctctggctggaggtcacccagtcgttcagctcctcggctac
atggaaagcgagcctctgactttgcagctgttcatcggcacggcggacgaccggctgctg
agaccccacgccttctaccaggtccaccgcatcacgggcaagaccgtgtccacgtccagc
cacgaagccatgcacaacaacaccaaagttctggaaatcccgctgttgccagagaacaac
atgcgggccgtaatcgactgtgctggcatcctgaagttgcgtaactccgacatagagttg
aggaagggcgagacggacatcgggcgcaagaacacgcgtgtgcggatggttttcagagtc
cacatccaccaggcaaccggcaggacggtgtctctgcaggtttcctcaaatcctatcgag
tgttcccagagatctgcccaggagctgccgttggtggaaaagcagaatctggaatcgtgc
tccgccctcggaggcgtgaagatgctcctggaaggacacaacttccagcacgactccaaa
gtggtgtttgtggagaaggctcaagacggtcaccacctgtgggaaagtgaggccagagtt
gagagggatccttccaagcctaatactctgctggttgaaattcctccgtacaggacccaa
agactctctgctccggtccacgtcagcttctatgtctgcaacggcaagaggaaaagaagc
cagcaccagcgcttcacatacgtccatccaagcgttccaacgataaagacggagccgcac
gacgactttagcgcccctctgatgtgcacccagcagggttcctcaaagccgttctacgcc
ctgacctcctccagtcctgatcccaggtcgtgtgttgtgggcggggcttaccctgtaagc
cagcgaagaccgacgaccaagtctccctccctgcctttctcgggctctcagagcccaagc
cccaaactgtttgagctgtcgtcatcgccctacagcaagtgcttctctgccgccccgtcc
gtccagacctcggggtcgccggctcctcacgtctccatcatccaagagacttctgtgcac
catcaccctccaaatctctaccctcccaacagctcctcttcccctccagcctcacagccc
tccccaccaaatgacactccgttttctcagaatcctggagtgaccccatctcaaccagac
agctccggttcaagcatccaggaggttcccaggaaggaggtgttgtcgtctgtgcagaag
gaggggagcccagaacgaatgaccgttagcatcaagaaagaaccacaagaactggaccag
atctacctggatgacgtcaatgagatcatcaggaacgacctgtcggcggtctcagtccaa
agccaaacgtag
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