Oryzias melastigma (Indian medaka): 112138623
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Entry
112138623 CDS
T07439
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112138623 (wdhd1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
112138623 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
HMG_WDHD1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
HMG_box
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_WDR19_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
DUF6476
Motif
Other DBs
NCBI-GeneID:
112138623
NCBI-ProteinID:
XP_024116970
Ensembl:
ENSOMEG00000019072
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MPCERKPMRYGHSEGHTEVCFDEGGKFLVTCGNDGDVRIWESLDDDDPKFITVGEKAYSL
ALKRGKLVTASSNNTVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVADSSQQKTLRGHEAPVLSVAFDPKDEFLASACCDGSVVVWDIEQQTQVISWPLLKKT
NDVSNARSLCRLAFQPSSGKFLAVPVESKVHLYGRGSWDHAATLSDDLLSQPINVVSWSP
CGQFLAAGAVGGSLTVWDVSSKLCVERQKHEKGFSVCSLAWHPSGRQLAYTDTEGCLGLL
DGVNTSISAVDQAPTKKADKDFDDLFDDDDDQLMDEGLSDSRSPAQKRATRNEDDDEDDD
FRIPSTGRVKNRGAILDDENSLDTASLKFGEDKPADEEDAGGPVGPAAPPLLPSRPVYEG
PLPSLPQKAFQAGSTPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAMHLTN
SLGHTMADISQEAVLLACPSTEELASKLQCLHFSSWDTNKEWMVDMPKGEDVKALCLGQG
WAAVATSALMVRLFSIGGIQREVFSLPGPAVCMAGHGEQLLIVYHRATGFDGDQALGVQL
LQLSRRRKQILSGEPLPLSHKSYLSWLGFTAEGTPCFVDSEGVVRMLNRALANTWTPVCS
TRDTCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTTTEKG
QMEEQFWRSVLFHNHYSFLSASGFEVDEDAQTQSEKEKQELLMKMFALSCRLEREFRCVE
LAELMTQNVVTLAIRYASRSRRMALAQRLSEIAMEKAVQSQQEEPEEQEEDLQYCSVRRS
SEFGEAGLAGGRRVSRHAQEEEPEKNGPQESEEEAQTNVNPFAKEAVSPVKQSVTPVGKV
ARANPFKVSATGKSSVSAQPRAANILDNMTSSRKSTPLSGPAAKTSKSPVLKPLAPRPKT
KTQSTLLQMASSKAKKAEEDKEPDLQKQAEAPPPVSENQRPKTGFQLWLEENRKSITADS
PDLDETEVIREAMGRFRVLSAEERLSWTERAKGQDGDAEGKKRKRPGEQQRGGAEETTAH
ESGAKKKKALESSSRLSAFAFNQN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtgagagaaagccgatgcgctacgggcactcggagggacataccgaggtctgc
ttcgatgagggtgggaagtttttagtgacctgtggaaacgatggagatgttcggatctgg
gaaagtctggatgatgatgatccaaagttcatcaccgttggagagaaggcttactctctg
gctctgaagagaggaaagctggtgaccgccagttcgaacaacacggtgcagatccacacc
ttccctgatggagatccagacggcatcctgacccggttcaccaccaacgccacgcacgtc
accttcaacagcagtggctccagggtggctgcaggatccagtgacttcatggtgaaggtt
gtggaggtggcagacagcagccagcagaaaacgctgcgaggacacgaagctccggtcctc
agcgtggcctttgaccccaaagatgagttcttggcctctgcctgctgcgacggctctgtg
gtggtgtgggacattgagcagcagactcaagtgatcagctggcctctgctgaagaagacg
aacgacgtcagcaacgcccgctctctctgccgcctagcctttcagccctcatcagggaag
ttcttagccgttcctgtagaatcaaaggtgcacctgtacgggcgaggctcctgggaccac
gccgccacgctctctgatgacctgctgtcacagcccatcaacgtggtgtcctggtctccg
tgcggccagttcctggcagcgggggccgtgggggggtcattgacggtgtgggatgtgagc
agcaagctttgtgttgagaggcagaagcacgagaagggcttcagcgtctgcagcctggcc
tggcatccgtctggcaggcagctggcgtacacggacacagagggctgcctgggcctgctg
gacggggtgaacacctccatcagcgccgttgaccaggcgccaacaaagaaagcggataaa
gactttgacgacttgtttgacgatgatgacgaccagctgatggatgaaggtctgagcgac
agccgctcaccagctcagaaacgagccaccaggaatgaggatgatgacgaggacgatgac
ttcaggatcccctccacgggccgggtgaagaacagaggggcgattctggatgatgagaac
tcgctggacacagcctctctgaagtttggtgaagacaaacctgcagatgaggaggatgca
ggaggccccgtgggtcctgccgcgcccccgctgctgccctcacggcccgtctacgagggg
ccgctgccttctcttccacagaaagccttccaggcgggctccacgcccgctcacctcact
caccgcttcatgatgtggaactcggttggaattgtgcgtggctacaacgacgagcaggac
aacgccatcgacgtggagtttcacgacacagccgttcatcacgccatgcacctcaccaac
tctctgggtcacaccatggcggacatttcccaggaggccgtgctgctggcctgccccagc
acagaggagctggccagtaagctgcagtgcctccacttctcctcctgggacaccaacaag
gagtggatggtggacatgccgaagggggaggacgtgaaggcgctgtgtctgggtcagggc
tgggcggcggtcgccaccagcgcgctgatggtccgactgttttccatcggaggcatccag
agagaagtcttcagccttccggggccggcggtctgcatggccggacacggcgagcagctg
ctcatcgtctaccatcgagctactggctttgacggagatcaggctctcggcgttcagctg
cttcagctcagtcgcaggaggaaacaaatcctcagtggcgagcccctcccgctttcacac
aagtcctatctgtcctggctgggcttcactgccgaaggaacgccgtgcttcgtggactcg
gaaggagtggtgcgcatgctgaaccgtgcgctggccaacacctggacccccgtgtgcagc
accagggacacctgcaagagcaagtcggaccactactgggtggtgggggtgcacgagaac
ccacagcagctcaggtgtattccatgtaaaggctccaggtatccccccaccctgcccaga
ccggctgtggccatcctgcccttcaagctgcctctgtgtcagaccaccaccgagaagggg
cagatggaggagcagttctggcgttcggtcctcttccacaaccactacagtttcctgtct
gccagcggcttcgaggtggacgaggacgcgcagacgcagtcggagaaggagaagcaggag
ctgctcatgaagatgtttgctctgtcctgtaggctggagagagagtttcgctgtgtggag
ctggcggagctaatgacccagaacgtggtgactttggccatccgctacgcgtcccggtcc
agacgtatggcgctcgcccagagactcagtgagatcgccatggaaaaagcggtccagagt
cagcaggaggagccagaggagcaggaggaagatctgcagtattgcagcgtcaggcgctcc
tctgagtttggagaggctgggctcgccggaggacggcgtgtttccagacacgctcaggag
gaggaaccagagaagaacgggccgcaggagtcagaggaggaggctcaaacaaacgtaaat
ccttttgccaaagaggccgtctcacctgtgaagcagtctgtaacacctgttggtaaagtg
gctcgagccaatcctttcaaagtttctgccactggaaagtcatctgtgtccgctcagccg
cgagcagccaacatcctggacaacatgacctccagcaggaagtcgacgccgctcagcggg
ccagcagcaaagaccagcaaaagccctgttctgaaaccgctagcgccccgcccaaagaca
aagactcagtccaccctgctgcagatggcttcctctaaggccaagaaggcagaggaggac
aaagagccagatctgcagaaacaagctgaagctccgcctcctgtttcagaaaaccaacgg
ccaaagacaggctttcagctgtggctggaggagaacaggaagagcatcactgcagacagt
ccagacctggatgagacggaggtcatcagggaggccatgggccgcttcagggtgctgtcg
gcagaggagcggctgtcatggacggaaagagcaaaaggacaggatggagacgcggagggg
aagaagaggaagaggccaggagagcagcagagaggaggtgcagaggagaccacggcacat
gaaagcggcgccaaaaagaaaaaagcgctggagtcctcctccaggctttctgcctttgct
tttaaccagaactga
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integrated database retrieval system
