Oryzias melastigma (Indian medaka): 112138713
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Entry
112138713 CDS
T07439
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112138713 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112138713 (nvl)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112138713 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
AAA_2
NPHP3_N
TIP49
AAA_33
Mg_chelatase
RNA_helicase
AAA_28
nSTAND3
AAA_17
Rad17
AAA_18
Viral_helicase1
TsaE
ABC_tran
NACHT
ATPase
AAA_3
NB-ARC
Zeta_toxin
IstB_IS21
nSTAND_NTPase5
Sigma54_activ_2
Cytidylate_kin2
cpSF2-GREB1
Motif
Other DBs
NCBI-GeneID:
112138713
NCBI-ProteinID:
XP_024117090
Ensembl:
ENSOMEG00000016434
UniProt:
A0A3B3DQ46
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Position
LG15:1551425..1578688
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AA seq
815 aa
AA seq
DB search
MKNKGGCWMDGRLRQRVEQYLASKDSEYVDLSEMAANLQRLYRVDYGRRNKTAFRIQVEK
VYEAVKEVSELSDIEKKHLAKRARSLQKDGDGGSSSTDSSDQDDGFRDNTLNSTLTSLYR
RDISNPSSPSSRKAGSQSAGMQVSSGGWFIDKGQGPTSSSTLIDLCEDESVDGRTGVASS
EPDRIPKKSRKRTKSSADQTGSQSQNSKSSSAKWKPSELQHPSVTFEDVGGNEEALTEVC
KLLIHMRHPEVFQQLGVVPPRGFLLHGPPGCGKTLLAQAVAGELQLPLLKVSAPELVSGV
SGESEQKLRELFDQAVSSSPCILFIDEIDAITPKREVASKDMERRMVAQLLTCMDDLNSL
AVTVQVMIIGATNRPDSLDPALRRAGRFDREISMGIPDETARLRILKTLCRKLTLPADFD
FQQLARLTPGYVGADLMALCREAAMNAVNRILMKVGTPSEVQGSAEEQLERSGPAGAKSD
QLQHLLRLLKTTETLPQEELAVLSIVMLDFQAALSSVQPSAKREGFATVPDVTWEHVGAL
QDVREELTMAILAPVRSPELFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISV
KGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLL
TEMDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPSPADRCAILLAVTKGGT
MPLLDPDVHLEEIASDERCSSFSGADLTALVREASVNALKAYLKSQQGGEIPPSGCIADI
QVSRIHFEEAFGKVRPSVTPKEQLRYEQLRESLRR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaaggtggatgctggatggacggccgcctcaggcagcgggtggagcagtat
ctggcctcaaaagacagtgaatatgtggacctgtcggagatggcagccaaccttcagaga
ctctacagagtggactacggcagaagaaacaagactgcctttaggattcaggtggagaaa
gtgtatgaagcggtcaaggaggtgtcagagctcagtgacatagaaaagaaacacctcgcc
aaaagagccaggagcctccagaaggatggtgatggtggcagcagctcaacggattcctct
gaccaggatgacggtttccgtgacaacactctcaacagcactctgacttcactgtacaga
cgcgacatctccaatcccagcagtccttctagcagaaaggctggctctcagagtgcaggg
atgcaggtttcctctggaggctggttcattgacaaaggccaaggtcccaccagcagcagc
accctgatcgacctgtgtgaagacgagtcagtggatggccggacaggagtggcctcatct
gagccagacaggattcctaagaagtccagaaaaaggacgaagagctcagcggatcagact
ggatctcaatctcagaacagtaaaagtagttcagctaagtggaagccttcagagctgcag
catccttctgtgacatttgaggacgtggggggaaatgaggaggccttaacagaggtgtgc
aagcttctgatccacatgcgccacccggaggtgttccagcagctgggtgtggttcctcct
cgaggttttctgctccatgggcccccaggctgtggaaaaacgttgctggcccaggctgtg
gcaggggagctgcagctgcctctgttaaaagtgtctgcgccggagctggtgtctggagtg
tctggggagtctgaacagaagctaagagagctgtttgaccaggcggtgagctcaagccca
tgcatcctgttcattgatgagatcgatgccatcaccccaaagcgagaggttgcctctaaa
gacatggagagaaggatggttgctcagcttttgacctgcatggatgacctgaacagtcta
gcagttacagtccaagtgatgatcattggagccaccaacaggccggattcactagacccg
gccctccgccgcgccgggcgctttgacagagaaatctccatgggtatccctgatgagaca
gcccgcctcaggatcttgaagacactgtgccggaagctgacgctgccagcagactttgac
ttccaacagctggctcggcttacgccgggttacgtaggtgcagatttgatggctctgtgc
cgcgaggcagccatgaacgccgtcaacaggatcctaatgaaagtcggaactccatcagag
gttcagggctctgctgaggagcagctggagaggtccggccccgctggagccaagagcgat
cagctgcagcaccttctcagactgctaaagactacggagacgctgccgcaggaggagctg
gcggtgttgtccatcgtcatgttggacttccaggctgctctgagcagcgtgcagccgtca
gccaagagggagggctttgccaccgtaccagatgtcacgtgggagcatgtaggagccctg
caggacgtgagagaagagctcaccatggccatcctggctcctgtgcgctctccagagctc
ttcagggctctggggctcagtgccccttcaggggtgctgctggctggacccccaggatgt
gggaaaactctgctggcgaaggcagtggccaatgagtcgggcctcaacttcatctctgtg
aaaggtccagagcttctcaacatgtatgtgggggagagcgagcgagctgtcaggcaggtc
ttccagagaggacgcaactctgctccgtgtgtgatcttctttgatgagatcgacgctctg
tgtccacggcggtcgggccacgagtcaggagccagcgtccgggttgtcaaccagctgctg
acagagatggacgggctggagacccgccggcaggtcttcattatggctgctacaaacaga
ccagatattatcgaccctgctgttctgaggccgggccgcctcgacaaaacgctctacgtg
ggtctgcccagtccagcggatcgctgtgctattctgcttgccgtcaccaagggagggacc
atgcctctgctggaccctgatgtccatcttgaagagatagcatcagatgagcgctgcagc
agcttctcaggagctgacctgactgccttagtacgggaagcttctgtaaatgcactcaag
gcctatttgaagtcccagcaaggaggtgagattcctccctctggctgcattgctgacatt
caagtcagcagaattcactttgaagaagctttcggcaaagttcgtccatctgtgacacca
aaggagcagctacggtatgagcagctcagagagtcactccgaagatga
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