Oryzias melastigma (Indian medaka): 112138772
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Entry
112138772 CDS
T07439
Symbol
mcf2l2
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112138772 (mcf2l2)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112138772 (mcf2l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
DUF7799
Spectrin
CRAL_TRIO
PH_10
RPC3_helical
Motif
Other DBs
NCBI-GeneID:
112138772
NCBI-ProteinID:
XP_024117166
Ensembl:
ENSOMEG00000015177
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MDCRFWLIFSHKSQDNSSLMTAVSGGGLAIGGGARGDWSLPHPEMLCWLKEDEMSVQELL
QRVQCVITHVDEIMQQDIRPLLAVDIIEQLHRQFALLSGGRGKDGAPIIIFPEYSGFSDV
PEEDFLNVVTYLTSIPSLDAASIGFIIIMDRRKDKWSSVRGCLSRIAGAFPGHLQLVLVL
RPSRFFHRTVTDIGIKMHKDDFKMKIVMLNSLSDLHGYVDRSQLTRELGGSLDYNHSQWI
HHRTAIENFAMTVKSTAQMLQRFGNELAETDLPKDVQSTKDLLAAHTDRHNHLKDELKLA
LRQGSTLSGCIKEQAAKSENHELNPDEMENQTTVERLMAQLDETDNAFEQFWSKHHLKLE
QCLQLRHFEKDFREVKVTLDGLMDTLNTLADTADCAARVELLLKELKALEDKASPTLEKA
QLHALHGDQLIQSNHYAVDSIRPKCVELRRVCDDFSNEVMKKRDVLSKSLQIHIGIDKVN
QWCESGIYLLASQAVDKCQSQEGAESALTDIENFLESAEKNQLTELKNLHNQYEVVLSED
LKGSVQMVLKRLEDVQEMFEKRHVSLKRLSAKQTRPIQPVAPRPDSSPKRPSVRNPPRNT
GSQQSFARRASDNSNTGRQAADVDPNKKKNIRKNKAGIKIEVMHEESQGGSTHVVVPAES
EESLSSRRRHIMTELIETERIYVEELQSIMEGYYVELNNSEFSHLIPPSLENKRDVLFGN
LPEIYEFHNKTFLMELENCVEKPELVGSCFLNRKEELQVYEKYCQNKPLSEVLWRQCGDS
LFFQECQKKLDHKLSLDAYLLKPVQRITKYQLMLKEMLKCSKDEGMVELEEALATVIDII
KSVNDSMHQIAITGFDGNLSELGKLLMQGSFNVWTDHKKVHSKVKDLARFKPMQRHLFLY
DKMLLFCKRREDATEGYEKTPSYSFKHLLKMSAVGITENVKGDSKKFEVWYNGREEVYII
QAPSMEVKNTWVSEIRKVLTGQLEACREASQLNIYSSPIRNIRKMALRQSDSSSPELGFR
RTNAGPNIRQKKADTSAGRSGHSAVNARKHFSLQALSNRRSLPAEPAAKEAEVPRRFSLT
SSLASSSSINARRTKGSLSASIKSKRHEIKSDPTPFGYEDTLRGAMAAVRKRQSMTGSTG
SGAGGTPAVPRSTSQPGCVQQRLLAMDTEDFETIPSSAEESSNSSEEESNNKNSKRVQLT
YASCEARDLSLGGSDLVQFLEESEKGN
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggactgtcgattctggctcatcttttcacataaatcccaggataacagctccttgatg
actgcagtaagtggtggagggctggcgataggaggcggagccagaggagactggagcctc
ccacaccctgagatgctgtgctggctgaaggaggacgagatgtcggttcaggagctgctg
cagcgagtgcagtgtgtcatcacacatgtcgatgagatcatgcagcaggacatcaggccc
ctgctggcagtggatatcatcgagcagcttcatcggcagttcgccctgctgtcaggcggg
cgaggaaaggatggagcacccattattatttttcctgagtactcaggcttcagtgacgtt
cctgaggaggattttctcaacgtcgttacgtacttgaccagcatccccagcctggatgct
gccagcattggcttcatcatcatcatggaccggcggaaggacaaatggagctccgtcagg
ggatgtttgtccaggatcgctggggctttcccgggacatcttcagctggtgttggtgctt
aggccgtccaggttcttccacaggactgtaacggatattgggataaagatgcacaaggat
gacttcaaaatgaagatcgtgatgctgaactcactgtcagaccttcatggttacgtggac
agaagccagctgacgcgggagcttggaggaagcctggattataaccacagtcagtggatc
catcatcgaactgctatagaaaactttgccatgacggtgaaatccactgcccagatgctg
cagcggtttggtaatgagctggctgagacggatcttcccaaagacgttcagagcaccaaa
gacctgctggctgctcacactgacagacacaaccacctcaaagatgagctgaagctggcc
cttcgacagggctccaccctgtctggttgtataaaggagcaagctgccaagtcagagaac
catgaactcaacccagatgagatggagaaccaaaccacagtggaaaggctgatggcacag
ttggatgagaccgacaacgccttcgagcagttctggagtaaacatcacctcaagctggag
cagtgcctgcagctgcgccactttgagaaggacttcagagaggtcaaagtgactctcgac
ggtttgatggacactttaaacacactagcagacactgctgactgtgcagccagagtggag
cttcttctgaaggagctgaaagcgctggaggataaagcatcgcccacgctggagaaagcg
cagctgcacgcgctgcacggcgaccagctcatccagagtaaccactacgcggtggactcc
atccggcccaaatgtgtggagctgcggcgggtctgcgatgacttcagcaacgaagtcatg
aagaagcgagatgttttgtccaaatccctgcagatccatatcggcatcgacaaggtaaac
cagtggtgtgaatctggtatctatcttctggcctcccaagctgtggacaagtgtcagtca
caggaaggggcggagtcagctctgacggacattgaaaactttttggagtcagcagagaag
aaccagcttacagaactgaagaacctccacaaccagtacgaggtggttctgtccgaggac
ctgaagggcagcgtccagatggtgctgaagcgactggaggatgttcaagagatgtttgag
aagcgccatgtcagccttaaaagactgtcagccaaacagaccagacccattcagcccgtt
gctccgaggcccgattcctcacccaaacgtccttcagtcagaaaccccccaaggaataca
gggagtcagcaatctttcgctcgaagagcctctgataactcaaacactggtagacaggca
gcagacgttgatcccaacaagaagaaaaacattcgcaagaacaaggcaggaatcaagatt
gaggtgatgcacgaggagagccagggaggctccacacacgttgttgtccccgctgagtct
gaggagagtctgtccagcagacgcagacacatcatgactgagttaatagaaacagagagg
atctacgtggaggaactgcagagcatcatggagggctactatgttgagctgaataactcc
gagttcagccacctcatccccccatcactagagaacaaaagagacgtgctgttcgggaac
ctcccagagatctacgagtttcacaacaagacgtttctgatggagctggaaaactgtgtg
gagaaacccgagctggtgggaagctgttttctgaacaggaaggaggagcttcaggtgtat
gagaagtactgccagaacaaacctctctctgaagtcttgtggagacagtgcggggacagc
ctcttctttcaggagtgccagaagaaactggaccacaaactgtctctggatgcctacttg
ttgaagccggttcagaggatcaccaaataccagctgatgctaaaggagatgctgaagtgc
agtaaggatgagggaatggtggagctggaggaggctttggccaccgtcatcgacattatc
aagtctgtcaacgactccatgcaccagatcgctattactggttttgatggaaacctgagt
gagctggggaagctgctgatgcagggctccttcaacgtgtggaccgaccacaagaaagtc
cacagcaaggtgaaggacctggcccggttcaagcccatgcagagacacctgtttctgtac
gacaagatgctgctgttctgtaagaggcgagaggacgccacagagggctacgagaagacg
ccgtcctacagcttcaaacacttgcttaagatgagcgctgtggggatcacagagaatgtg
aagggggacagcaagaagtttgaggtgtggtacaacggaagagaggaagtttacattatt
caggctccctccatggaggtaaaaaatacctgggtgtcggagatccgaaaagttctgaca
ggccagctggaagcatgcagagaagccagtcagctgaacatctacagttcacccatcagg
aatatccgcaaaatggctctccgacagtcggattcctcaagtccagagctgggctttagg
aggacgaacgctggcccgaacataaggcagaagaaagccgacacctcagccggccgttcg
ggccactcggctgttaatgccaggaagcacttctccttgcaagccctttccaaccgaagg
tctcttcccgcagagcctgctgctaaggaagcagaggtcccacgccgcttctctctcaca
tcctcgctagcctcctcttcttccatcaacgctcgcagaactaaaggttccctctctgct
agcataaaaagcaagagacatgaaataaagagtgatccaactccatttgggtatgaagat
actttgcgtggtgctatggcagcagtgaggaagcgccagagtatgactggcagcaccggt
tctggtgctggtggcactccagctgtgcctagatctacctcccaaccaggctgtgtgcag
cagcgtcttcttgccatggacacagaggactttgagacgattccctccagcgcagaggag
tcctccaactcttcagaggaggagagcaacaataaaaatagtaagcgggtgcagctgacc
tacgcgtcctgtgaagcgagagacctttcattgggaggcagtgacctggttcagtttcta
gaagaaagcgaaaagggaaactga
DBGET
integrated database retrieval system
