Oryzias melastigma (Indian medaka): 112138780
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Entry
112138780 CDS
T07439
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X2
KO
K09299
zinc finger homeobox protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112138780
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112138780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-met
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
112138780
NCBI-ProteinID:
XP_024117182
LinkDB
All DBs
Position
LG17:34322981..34400686
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AA seq
1091 aa
AA seq
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MADGPRCKRRKQANPKRSSVTHFNNGLEASSDSDDEDKLHIVEDDSLQEQDVADADRTTP
LDSHDDTRTVLLHNGSWNGVKEECVSDEEEEEVKDALVEEILQQGDTAIIYPEAPEDEQS
PAETGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSEDNYSCSHCSYTFT
YRSQLERHMSHHRGSKEQNHVSQSTGGSGETGGTRKFNCTECSKAFKYKHHLKEHLRIHS
GEKPYECSNCKKRFSHSGSYSSHISSKKCMGTTPPNGVTRTAMKSPSPTAQVRPVAIAPA
RMVLKEKIESKPLQEQLPVTQIKTEPVEYECKPDATAPTAPAGSKGVLNGAAQPAAVSAA
ALPQGVAMVVPTVGLMSPVSINLNDLQNVLKVAMDGNVLRQVLGSANGVVAQGKQGIVVQ
QPQQQIISLPAFVDHDGTTKIIINYSITPAAAAAANTQPAPLIIKANPPAPTPVAAKTAS
PTKPEEPQTPEATDLSIVKTEPESEGEEAEAAAKKKTDANESPEAAQTPKESHTSTCLLC
DDCPDNLEAPHLLQHQKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLLSLLKTYF
ASNANPSEEELSNISESVSIPVDVVRKWFAKMNAGRNTDKHRSDAKARESTDSSSEEAVN
HNSEGEEEASNKAPASDCGSVSPSESSSDLVIVKSEPEDPESLDSQAEPLDLSLPKHLTA
ALEKQAAAPPRKQQEQPLNLTCLRKEQLDGRTIYVTTPQSGGPVNIVTAAQLPTLVAIAG
QGTVGCISAINTTTKRTILIPQLTYTYATAGNSTGAKTVVLNGHKEKRAESSFDAVSAAD
EQNDAKKRRLENGVYPCDLCSKVFQKASSLLRHKYEHTGKRPHECSICNKAFKHKHHLIE
HSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDSSSPGSASGSRRALLELGSP
VGGPQSDSRTTTPPSQVDSDERESEAEEYEDDEAMCMDDIRVVQVDDGECEIYEGNFDDD
EEEEEEEEVGTEGDGVEEEFSCDVVEIELGEDPPEGGRTQEKSADCEEGSGESVREGPGS
TEPSGTPTASN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggagcagcgta
acacacttcaacaatggcttggaggccagttcagactcagatgatgaggacaagctacac
atcgtggaggacgacagcctgcaggagcaggacgtcgccgacgctgacaggaccacgcca
ctggacagccacgatgacaccagaacagtattactgcacaacggctcctggaacggagtg
aaggaggagtgtgtgtcagacgaggaggaggaggaggtgaaagatgctctagtggaggag
atcctccagcagggcgacacggccatcatctatcctgaagccccggaggacgagcagagt
ccagcagagaccggaggcgctgatgaaaatggcacacctgactccttctcccagctgcac
acctgcccgtactgttcccggggttacaaacgcaacgcctctctgaaggaacacattaaa
tatcgccacgagaccagcgaggacaactacagctgctcccactgcagctacaccttcacc
tatcgctcgcagctggagaggcacatgagccaccatcgaggaagcaaggagcagaatcac
gtgtcccagtcgactggaggatcaggagaaacaggcggcacgcgaaagttcaactgtact
gaatgctccaaggccttcaaatacaaacaccacctgaaggagcacctgcgcatccacagc
ggtgagaaaccgtacgagtgttcgaattgcaagaagcgcttctcccattcaggctcctac
agttcccacataagcagcaaaaagtgcatgggtacaacgcccccgaacggcgtcactcga
actgcaatgaagtccccctccccgaccgctcaggtcaggcctgtcgccatcgctccggcc
cgcatggtcctcaaagagaagatcgaaagcaagccgctccaggagcagctgcccgtcacc
cagatcaaaaccgaacctgtggaatacgaatgcaagcctgacgccaccgcacccactgct
ccagcgggtagtaagggcgtgctgaacggagcggcgcagcccgccgctgtctccgccgca
gccctgcctcagggtgtggccatggtggtgccgacggtgggcctcatgtcacctgttagc
atcaacttaaacgaccttcaaaatgtgctcaaagtggccatggacggaaacgtgctccgg
caggtgctgggctcggccaacggcgtggtggcgcaggggaagcaggggatcgttgtccag
cagccgcagcagcagatcatcagcctgccggccttcgtggatcacgatgggaccacaaag
atcatcatcaactacagcatcacccctgcagccgccgctgccgccaatacccagcctgca
ccactcatcatcaaagcaaaccctcccgcccccacgcctgtagctgccaaaacggccagc
ccgaccaaaccagaggaaccccaaaccccagaggccaccgacctttctattgtgaagacg
gagccggaatcggaaggcgaggaggcagaggccgcagcaaagaagaagacagacgccaat
gaatcgccagaagctgctcagacgcccaaagagagccacaccagcacctgtttactgtgt
gacgactgtcccgacaacctggaggcgccgcacctgctccagcatcagaaggcagccaac
ggcgaggccgtggactccgccgctctggacccgtccttcgctgctctgctgagcgaggcc
ggagtgacgctggaggagccgcccgtggacgacctcctctccctcctcaagacgtacttc
gcctccaacgccaaccccagtgaggaggagctctccaacatctctgagtctgtcagcatt
ccagtagatgtcgtgaggaagtggtttgctaagatgaacgctggcagaaacacggacaaa
catcggagtgacgccaaagcgagagaaagcacagattccagctcagaggaggctgtgaat
cacaacagtgaaggagaagaggaggcttccaacaaagctccagcgtctgactgcggcagc
gtctcgccgtcagaatccagcagcgacctcgtgattgttaaaagtgaacctgaagatcca
gaatccctggactcccaggcggagcctctggacctgtctcttcccaaacacctcacagca
gcattagaaaagcaagcagcagcgcctccccgcaagcagcaggagcagcctctcaacctg
acctgcctgaggaaggagcagctggacggccggaccatctacgtcaccacgccgcagagc
ggaggacccgtcaacatcgtcaccgccgcgcagctgcctaccttagtggccattgccggt
cagggaacggtgggctgcatcagtgccatcaacaccaccacaaagcgcaccatcctcatc
cctcagctcacctacacctacgccacggccgggaactccaccggagccaaaaccgtcgtc
ctcaacggccacaaggagaaacgcgcagagagcagctttgacgcagtttcagctgcagac
gagcagaacgacgcaaagaagcggcggctggagaacggcgtttacccctgtgatctgtgc
tcaaaggtcttccagaaggccagctcgctgctccgacacaaatacgaacacacaggaaaa
cgaccccatgaatgcagcatctgcaacaaagccttcaaacacaaacaccacctgatcgaa
cactcccgcctgcactccggcgagaagccgtaccagtgcgacaaatgcggcaagcgcttc
tcccactcaggctcgtactcccagcacatgaaccaccgctactcctactgcaagaaggac
agctccagcccgggctccgcctcggggtcgcgcagagctctgctggagctgggcagcccc
gtgggcgggccgcagtcggacagccgcaccaccacgccgccctcccaggtggactcagac
gagagggagagcgaggcggaggaatacgaagacgacgaagccatgtgcatggacgacatc
cgggtggtgcaggtggacgacggcgaatgcgagatctacgagggtaacttcgatgacgac
gaagaggaggaggaggaggaggaggtggggaccgagggcgacggggtggaggaggagttt
tcctgcgacgtggtagaaatcgagctcggggaggatccgcccgaggggggaaggacccag
gagaaaagcgcagactgtgaagaaggttccggcgagagcgtcagggagggtccgggcagc
acggagccgtcaggcacgccgacggcgagcaactga
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