Oryzias melastigma (Indian medaka): 112138796
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Entry
112138796 CDS
T07439
Name
(RefSeq) LIM/homeobox protein Lhx1 isoform X1
KO
K09372
LIM homeobox protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112138796
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
112138796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
112138796
NCBI-ProteinID:
XP_024117205
Ensembl:
ENSOMEG00000006567
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All DBs
Position
LG14:complement(10508580..10511921)
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AA seq
403 aa
AA seq
DB search
MLHCTSCEKPILDRFLLKVLDRPWHAKCVQCCECKCSLTEKCFSRDGRLYCKNDFFRRFG
TKCGGCSQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELYILDEFKFVCKEDYQN
SNGKDTILLSVTTCSDPSLSPDSQDPQDDGKDSESGHLSDKDACGNDNDEQSAVGKRRGP
RTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQNRRSKERRMKQLSA
LSARRHVFFRSPRRMRAMGERLEPGELGHFSYYADYPGEYYGPGGNYEYFQGPPSSQAQT
PADLGFVPSTVPAGTPLGGTMDPHHHHHHHHPCAGDAQCFPEPASHHPANSPSPEPGGPG
SIHSISSEMCGPSTPFTTVSLSDNGYTAQLSQPSSEMSEGTAW
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactgtaccagctgtgagaaacctattcttgataggttcttactcaaagttctg
gacagaccctggcacgccaaatgcgtccagtgctgcgagtgcaaatgcagtttgacggag
aagtgcttttcccgggatgggagactttattgtaagaatgatttctttaggagatttgga
accaagtgtggaggctgctcgcaggggattttacccagtgatctcgtccgcagagccaaa
agcaaagtgttccacctgaactgtttcacctgtgtgatgtgtaataagcagctgtctaca
ggagaggagctgtacatcctggacgaattcaagtttgtttgcaaagaggattatcagaac
tccaacgggaaagacacaatcctcctttcagtgacaacatgcagcgaccctagtttgtcc
ccggactcccaggacccgcaggatgacgggaaggactcggagagcggccatctgtccgac
aaagacgcatgcggcaacgacaacgacgagcagagcgcggtcggcaagcggcgcgggccg
cggaccaccatcaaagccaagcagctggagaccctgaaagcggctttcgctgccacgccg
aaacccaccagacacatccgggagcagctgtcacgagagaccggcctcaacatgagagtg
atccaggtttggttccaaaatcggaggtccaaagaaagacgcatgaagcagctgagcgct
ctgagcgcgcggagacacgtgtttttccggagcccgaggaggatgagagccatgggggag
agactggagccaggagagcttggccacttctcctactatgctgattatcccggtgaatac
tacggcccaggagggaattacgaatacttccaaggcccaccatcatcccaggctcagact
ccagcagatctgggctttgtgccctcaacggtcccagccggcaccccattaggaggcacc
atggacccccaccaccatcaccaccaccaccacccgtgcgccggagacgcgcagtgcttc
cccgagccggcgtcccaccaccccgcaaactcgcccagcccggagcccggtggaccgggc
tccattcacagcatctccagcgagatgtgtggccccagcaccccgttcaccacagtgtcg
ctcagcgacaacggatacaccgcccagctgtcacagccctcctcagagatgagcgaaggc
accgcctggtaa
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