Oryzias melastigma (Indian medaka): 112138810
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Entry
112138810 CDS
T07439
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112138810
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
112138810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
AcMNPV_Ac75
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
112138810
NCBI-ProteinID:
XP_024117219
Ensembl:
ENSOMEG00000014649
LinkDB
All DBs
Position
LG22:complement(27254571..27380981)
Genome browser
AA seq
684 aa
AA seq
DB search
MSSKVCKNCGSADIDVDQARGNAVCMGCGSVLDDNIIVSEVEFVETGGGGSLAVGQFVSS
DGGQRLPSFGDSYFPGGGSQSRAQTLQRAKQNINTLGHQLQMNQHCLDTAFNFYKMALNK
RLTSGRKSSYVIAACLYLVCRTEGTPHMLLDLSDVLQVNVYILGKTFLQLAKELCINAPA
IDPCLYIPRFAQMLEFGEKNHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVSAHMH
DFHRTIKEIVSVVKVCENTLRKRLTEFEDTPTSKLTVEEFMRIDLDEECDPPCYTAGLQK
IKTQQLERELKEKMQMVEDEIKGYQDEIDAELESLRPQLKGVYAAYVNRDLSSEDIRSVL
SQQEDVQSDEELRAVARHFDKDLDTLTVEALIKLEQETPQEENECGMEVPKRGGPSLASI
LGTMPSAATLGLPESISDCTGEEMENDGAADSGELDLSGIDDSEIELYLLSESEIKIKTA
LWMAENSDYLKEQKEKEAKIAKEKELGTYKEKPKSSGKRRSQIRASTADEAIGKMLEQKR
LSTKINYDVLKDLNIKPSTSPASKAESAKSESSGSKLSRRSTKPSQTPMGLSVPLSILGK
RLQPFVSRHPNKKQAVESSQESTFSPLPAPAAASASEVVVESGPVIYNDAADEEEDEEED
ACVSAMELLGGNDYGCDGDYDDGF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaaggtgtgtaagaactgcggcagcgccgacatcgatgtggaccaggcgcgg
ggcaacgccgtctgcatgggctgcggctctgtactggacgacaacattatcgtgtcggag
gtggagttcgtggagacgggaggcggggggtcgctggctgtggggcagtttgtgtcctcg
gatggcggtcaaagactcccgtcgtttggggactcctacttcccagggggaggctcccag
tcccgagctcagacgctgcagagagccaagcagaacatcaacactttgggtcatcagctg
cagatgaaccagcactgtctggacacggccttcaacttctacaagatggccctcaacaag
cgcctgacgagtggccgcaagtcctcctacgtcatcgctgcctgcctctacctggtgtgc
cgcactgaaggaacgccgcacatgctgctggatctgagcgacgttttacaggttaacgtc
tacattctgggaaagacttttctccagctggcaaaagaactctgcatcaacgctccagcc
atagatccatgtctgtatattccacgatttgcccaaatgttagaatttggtgagaagaat
catgaggtctccatgacggcgctgcgactggtgcagaggatgaagagagactggatgcac
acaggaagaaggccatcaggactctgtggagcagctctgctagtatctgctcacatgcac
gacttccaccgaaccattaaggagatcgtcagtgttgttaaagtgtgtgaaaacactctc
agaaagaggctgacagaattcgaggacacacccaccagtaaactgactgtagaagaattc
atgaggatagatctggatgaagagtgcgacccaccctgctacaccgctggactccagaag
ataaaaacccagcagcttgagagggagctgaaggagaaaatgcaaatggttgaagatgaa
ataaaagggtatcaggatgaaatagatgcagagctggagagcctgaggccccaattaaaa
ggagtttatgctgcttatgttaatagagacctcagcagtgaagacatccgctccgtgctg
tctcagcaagaagatgttcagtccgatgaggagctcagggctgttgccaggcactttgat
aaggacctcgatacactgactgtggaggctctgatcaagttggagcaggagactccgcag
gaggagaatgagtgtgggatggaggtaccaaaacgaggaggcccgtcattggcttccatt
ctgggaaccatgccttcagcagcgaccctgggcctcccggagtccatcagcgattgcact
ggagaggagatggaaaacgatggcgctgctgacagcggggagctggacctgagcgggata
gatgacagcgagatcgaactgtacctgctgagtgagagtgaaatcaaaatcaagacggcg
ctctggatggcggaaaactccgactacctcaaagagcagaaagaaaaggaagcaaagata
gcgaaggagaaggagctggggacctacaaagaaaagccaaaaagctcaggaaagagacgc
tcccaaatccgagcgagcacggctgacgaggccatcgggaaaatgctcgagcagaagcgg
ctctccaccaagatcaactatgacgtgttgaaggatctgaacatcaagcccagcaccagc
ccagcatccaaagccgagtctgcaaagagtgagtcgtctggctccaagttgagccgacgc
agcaccaaaccatctcagactcccatgggcctcagcgttccgctcagcattctgggaaaa
agattgcaacccttcgtcagcaggcatcctaacaagaagcaggcagtggagtcttctcag
gaatctaccttcagcccgctgccagcgccagctgcagcctcagccagtgaggtggtggtg
gagagcggaccagtcatctacaatgatgcggctgatgaggaggaggatgaagaggaggac
gcctgtgtcagcgccatggagctcctggggggcaacgattatggctgtgatggagactac
gacgatggcttctag
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