Oryzias melastigma (Indian medaka): 112138950
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Entry
112138950 CDS
T07439
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112138950 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oml04091
]
112138950 (frem2a)
Lectins [BR:
oml04091
]
C-Type lectins
Lecticans
112138950 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
112138950
NCBI-ProteinID:
XP_024117387
Ensembl:
ENSOMEG00000013724
UniProt:
A0A3B3DJV5
LinkDB
All DBs
Position
LG14:complement(16557173..16624362)
Genome browser
AA seq
3140 aa
AA seq
DB search
MHFFPLQHHLGGLSVKMLLHGLLLLCFSVTGIVLAQRDSSGLFYALRSELSEDAILVANS
GLRVPFGRSVFIDPINDLVIQTQPGDRCSITVLDNDPLSQRPGHLSPKKFPCDFGPRDVT
YFHYGSRSPAKDRVRLQLRYDTQTETVIIPFMMEVEVLFTQLELLTKNMPLTVEKLQGIS
NPIDKRILEFTYDRDSFKCEVALFSSGSSLPRYGKLLDGGKLSTMTDCDEFTQAGIRYQH
TFNHKSPNKDYIPMVVELHDKEGNLVRQECFHLMVRIKGGEENTPPKPSFASMMMMEVSQ
FVMTAITPDMLAAEDAESDPEELIFNITSPLSYEEGYIVSTDDRNLPITSFYQRDLRDLK
IAYVPPSLDSDTERIFQLEFAVVDTEGAVSDPFAFMIVVKPMNTLAPIVTRNTGQLLYEG
QSRPLISSHNLEISDEDNLEAVTITVVDGLRHGDLLVLGSHSRFFTPADLTTGIVLYQHD
GSDTYSDNIVFKMTDGKNEVEFLFPITIVPTDDEPPIINANTGLVLFKNQMVPLSPHMLS
AADIDSEDSTIKFTIVPPFSTIGTVLLRQSDAPEDPSSWKFNTEDEVYEKEVSEWLQKDI
TDGKLFYRHTGPHNTGTVTDQFVFTVQDDNDPPNLSEENSFIIRILPVDDVPPELFPGTT
LQMTVEEYKVTHFSKEVLRYTDLDSEDRDLKYTVIQPPTDTDENNPIMFGSLVLTDSPDI
RVTEFTQAQVNHHKLSYAPPDVELGITAHVVQFRYTVEDTAGNSAEGAFTIYLQPVNNKP
PQITNTGFGVFERGMHIITQAELDAVDLDTKSEEITFTLSRPPQHGQIQFAFSDLDNKGA
FRLADISNGKISYVHNGEETVSDGFLLDVSDGIHVVTVTVKVHVKPVDDETPTVNLPAGT
IGSRIDVLENGATEITSDVIQGHDDDTDGLQLTFIVEDPPALGEILVRGLPATRFTQADI
INGVVVYAHTSGEIGLALQQDGFNLTLTDMSDDWTVGGNKVSGVHVRVTILPVDNQAPQV
EIGIQFSVIEGEKYAISPEHVTAEDKDTPSDDILCTIIVQPTAGYLENVSPAPGSEKSRS
GTAISAFTIRDIREGNIYYVQSIHKGVEPVEDRFTLRCTDGINFSENHFFPIVIIPSNDE
KPEIFLREIVLMEGMNIVIDTPILNGADIDVPPEELVFIISKPPKHGTILNQLSTGSVLV
TNFTLEQIREASSIIYEHDDSETSEDSFEVTLTDGKYSVQKTAMVMIIPVDDETPRMSIN
DGLEVDIGETKEINNKVLKATDLDSDDSTLSFIVRFGPSQGHLQRKTPSGSLENVTLGMN
FTQADIDAGLVLYTHNGQEGIRDLVKFDVTDGINSLIDRYFYITVGSIDMVFPDVVSKGV
SLKEGGRVTLTTDLLSTSDINSPDENLVFTVTRAPVRGHLECTDTPGMPIVSFSQLQLAG
SKIFYVHTSDDEVKMDSFEFEVTDGYNPVFRTFRISIVDVDNKKPVLTIKSLVVTEGQLK
LITPFELNAEDQDTDEKLIRFTITQLPIHGKLLFNRSTPVTSFTKQDLNENLISYKHDGT
ESSEDSFSFTITDGTHTDFFVFPDTVYETRRPQTMTITVVAIDNGVPQIVVNKGALTLKI
LTTGHLGLPISPKVLRAEDRDSKPASLLFHITTEPKHGYVVNLGRGNNSVDTFSQADIDD
LHICYVLRNEENATSDVFHFSVEDKGGNKLSGQQFRLDWAWISLEKEYYVVDEEDKHLDV
VLRRRGYLGETSFIGIGTQDGSAKKNEDFKGKLQKQVQFNPGQTRATWRVRILADGKYEQ
AETFQILLSEPVMGVMEFPVVATVEILDPKDESSVFFPEQIHSVEEDVGELFLPVHRSGD
VSEELMVICHTQQGSATGTIPTTVLSYSDYISRPEEHSSLIRFDRGEREKLCRVVIIDDS
LYEGEESFNVTLSVPVGGRLGKHYTTTKVNIVEDLDDAPVFYFGEAEYYADESDGYVEVK
VWRTGTDLSKSGTVTVHSRKTEPASAEAGTDYVGISHNLDFAPGVSMQTFRVFILDDLGQ
PELEGTESFELVLRLPVNGILGEPGKATVFINDSVSDLPKVQFRKPLYTGEESDGLITAM
VYRSGDIRHKSSVRCYTRQGSAQVASDFDERPNTDASVISFLPGEVEKPCVLTLVDDTLY
EEGEELRLVLGTPRSSSQFGASVGAPNETLVKIKDTADKPIIRFLETKFSISEPKEAGAV
AIVRVPVVRMGDTSKLSVVRVHTKDGSAVSGVDYYPVSQDIEFRQGDKQHVVQVEVLFDG
VREMREAFTLHLKPDDNMVAETEMTKVIVYIEESNSMADVTFPSLPHVVSLLHYDDVART
PHNLQPPAGYPVICVTACNTKYPDYDKTGSICVSEHINNTLTRYRWLISAPAGPDGVTSP
MREVDFDTFFTSSKMITLDSVYFQAGSRVQCAARAVNSDGDEGLELSSPVVIISKEEGMC
QPRKMGTVGAEPFSAKLRYTGADDPKHPNLIKVTVTMPHIDGMLPVISTRPLVNFDLTLS
PDGTRVGNHRCSNLLDFSEVTTGHGFITASTRNPESMGDSAPYQFSGALRGNGTLRFYRN
LNLEACLWEFSSYFHMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGSG
GWQHFDLQSELRLTFVYDTAILWKDGIGSPPQAELQGSLFPTSMRINKQGRLVVNFRTRA
HFRGLFVESHSPGRIKRSVSSVSMVMSVDHPGLTFNLTLVRTEPTYNQPVQQWIFISDFA
VRDYSGTYTVKLIPCTTAQNIEYSVPPICSPREPVSFDLNIRFQQVSDPVAVEFSLNTQM
FLLSKRSLWLSDGSTSLGQESDVAFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGA
DGYVPKYNPTNFEFGCLADSPSLLYRFKILDKAQPETQALVFGEIGFNAVLAVDDPSALS
LVRQPGSDGFRLDSTAMFQVAAGREWYIHAIYTVRSKDAIGRGIGKRSLEYHSFVSATDN
RALSSRPETPRKRRSAGDAVPAVAEDIGIDNSRGTNIMHIFLDRTKRKSRLSDELFAGGL
EPDELNADDTEEGLLTVVGALVGVLLTVLIIVVIALIVRSKQKDWKEAGRGGVQEVVKGS
ISTEPMLVVRMQDCHDSSEV
NT seq
9423 nt
NT seq
+upstream
nt +downstream
nt
atgcattttttccccctccagcatcacctcggcgggttgtcagtgaagatgttgctccac
ggacttctcctcctgtgcttttctgtaacaggtattgtcctcgcgcagcgcgacagctcc
ggactattttacgcgctcagatcggagctttcagaagacgcgatcctggtggccaacagc
ggactgcgcgtgcctttcgggaggtctgtgttcatcgaccctataaatgatttggtgatc
caaacgcagccgggggaccggtgcagcatcaccgttctggataatgatccgctctcgcaa
agaccggggcacctctctccaaaaaagtttccctgtgatttcggtcccagagatgtgaca
tactttcactacggctccagaagtccagctaaggacagagtgaggctgcagctcaggtat
gacacgcagactgaaaccgttatcatcccgttcatgatggaggttgaagtcctttttacg
cagctggagttgctcaccaaaaacatgcctctcactgttgagaaacttcaagggatcagc
aaccccattgataagaggattttagagttcacctatgacagagactcctttaaatgtgag
gtggcactcttctccagtgggagctcactgcctagatatggaaaactcctggatggaggg
aaactttccaccatgacagactgtgatgagttcactcaggctggcatccgatatcaacac
acctttaaccacaaatctccaaataaggattacattcccatggtcgtagagctgcacgat
aaggagggaaacttagtaaggcaggagtgttttcatctcatggtccgtattaagggagga
gaggagaacactcctcctaaacccagctttgcttccatgatgatgatggaggtgagtcag
tttgtgatgacggccatcacacctgatatgctggccgctgaggatgcagagtcagaccct
gaagagcttattttcaacataacctccccgttatcttatgaggagggctacatagtcagt
actgatgacaggaacctcccaatcacatccttttaccagagagacctccgcgacctgaaa
atagcctatgtgccaccttcgctggactcggacaccgagaggattttccagcttgagttt
gcggtggttgacacggagggagccgtctcagacccttttgcttttatgatagttgtgaag
ccgatgaacacgctggcccccattgtgacccgcaacacaggccagctgctgtacgagggg
cagtcccggcccctcatcagctcccacaacttggagatcagcgatgaggacaacctggaa
gcggtcaccatcacagtggtggacgggctgcgacacggagacctgttagtgctcggttca
cacagcaggttcttcactcccgccgacctcacaacagggatcgtcttgtaccagcatgac
gggagcgacacatatagtgacaatattgtgtttaaaatgacagacgggaagaatgaagtg
gaattcctgtttcccattacaatcgttcccaccgacgacgagccaccgatcatcaatgcc
aacactgggctggtgctcttcaaaaaccaaatggtgcctttatctcctcacatgctcagc
gctgctgacatagactctgaggactcaaccattaaattcaccatcgttccgcctttttcc
acgattggcaccgtgctgctacgacagtcggatgccccagaagacccctcctcttggaaa
ttcaatacagaggatgaggtgtatgagaaggaggtgtcagagtggcttcagaaagacatc
acagatggaaagctgttttacagacacacgggacctcacaacactggcacggtcaccgat
cagtttgtgtttaccgttcaggatgacaacgacccccctaatctatcagaagagaactca
ttcatcatccggatcttacctgtcgatgatgtaccccctgagctattccccggcaccacc
ctgcagatgactgtcgaggagtacaaggtcactcacttcagtaaggaagtgttgcgctac
accgatttggactctgaggaccgtgacctcaaatacacggttatccagcccccaacagat
acagatgaaaataaccccatcatgtttggttctttggttttgacggacagccctgacatc
agagtgacagaattcacacaagctcaagtcaaccaccataagctgtcctatgccccccca
gatgtcgagttgggaatcacagcccatgtggtgcaattccgttacacagttgaagacaca
gcaggaaacagcgctgaaggcgcctttaccatttacctgcagcctgtcaacaacaagccc
ccccagattacaaacactggctttggtgtgtttgaacgagggatgcacataatcacccag
gcagagctggatgctgtagaccttgatacaaaaagtgaggaaataacttttactctgagc
cggccccctcagcacggccagattcagtttgcattttctgacttggataataaaggagct
ttcagacttgcagatatctcaaatgggaagatatcgtatgtgcataacggagaggagaca
gtgagtgatggatttctgctggatgtcagtgacgggattcatgtggtaaccgtgacagtc
aaagttcacgtaaagccggttgatgatgaaactccaacagttaacctgcccgcgggaacc
atcggctcccggatagatgtgctggaaaacggcgccacagaaatcacaagcgatgtgatt
caaggacatgacgacgacacagatggcctccagctgacgtttattgtggaagatcctcca
gccctgggtgaaatattggtcagaggattgcctgctactagatttacccaagctgacatt
attaatggggtggttgtgtatgcacacaccagtggcgagataggtctcgccctccagcaa
gatggattcaatttaactctaacagacatgtctgatgattggactgtaggtggcaataaa
gtcagcggagtccatgttcgagtcactattcttcctgtagataatcaggccccccaggtt
gagattggaatacaattcagcgttattgaaggggaaaaatatgccatcagtccagaacat
gtgactgctgaagataaggacaccccatcagatgatatcctttgcaccatcattgttcag
cccactgcaggttatctagaaaatgtatcccccgccccaggctcagaaaagtcaaggtca
ggaacagccatcagtgctttcaccatcagagacatcagggaggggaatatttactatgtg
caaagcattcacaaaggagtagagccggtggaggacaggttcacgctgaggtgcacggat
ggcataaacttttccgaaaaccacttcttcccaatcgttattatcccctcaaatgacgaa
aaaccagagatttttttaagggaaatcgtcctaatggagggaatgaacattgtcatagac
acgccgatattaaacggagccgatattgatgttccacctgaagaacttgtatttattatt
tctaaacctcccaaacacggcaccattttaaaccagctatccacaggctcagttctagtg
actaatttcactttagaacagatcagagaggcctcaagtattatttatgagcacgatgac
tcagagacaagtgaagatagctttgaagttactctgacagatggaaagtactctgtgcag
aaaacagccatggttatgatcattccagtggatgacgagacccccaggatgtctatcaat
gatggccttgaggtagacattggcgaaacaaaggagattaacaataaagtgcttaaagcg
acggatttagattcagatgacagcacactgtcatttattgttcgttttgggcctagtcaa
ggtcaccttcaaagaaagaccccatctgggtctctggagaatgtcacgctcggcatgaat
ttcacacaagctgatatcgatgctggtctcgtgctttacacacacaacggacaagagggg
attcgagaccttgtcaaatttgatgtgaccgacggcatcaattcactcattgatcgttac
ttttacatcacggtggggagcattgatatggtttttccagacgtggtcagtaaaggcgtc
tctctgaaagaaggtggaagagtgactttgaccacagaccttctcagtacttctgacatc
aacagtccagatgagaacttagtcttcacggtcactcgggcccctgttagaggccatctg
gagtgtacggatactcccgggatgcccattgtgtctttttctcaactccaattggctgga
agtaagattttttatgtccacacttcagacgatgaggtaaaaatggatagttttgagttt
gaagtcacagacggctacaacccagttttcagaacctttagaatctctatagtcgacgtt
gataacaagaagcccgttttgaccataaaaagcctggtagtgacagaaggacagcttaag
ctgatcacgccattcgagctgaatgctgaagaccaggacacagacgagaagctgatcaga
ttcacaatcacccaactgcccattcacggcaaacttctgttcaacagatcaacacccgtc
accagcttcaccaaacaagacctcaatgagaatctaatcagctacaaacacgatggaacc
gaatcctcagaggactcattttccttcaccatcaccgatggcacgcacacggacttcttt
gtcttccccgacacggtctacgagaccagacggcctcaaacgatgacgatcaccgtcgtg
gccatcgacaatggggtcccccagattgtggtgaacaaaggtgcgctcacgctaaagatt
ttgactacaggccacctgggattacccatcagtcccaaagtgctgagggcagaggacaga
gatagtaaaccggcctcactgctgttccacatcaccactgaacccaaacatggatatgtt
gtaaatctggggcgtggaaacaactccgtggacacatttagtcaagccgacatcgatgac
ctccacatctgctatgtgttgcggaatgaagaaaacgccacatctgatgtcttccatttc
tccgtcgaggataaaggtggaaacaagctgagcggtcagcagttccgtctggactgggcc
tggatctctctggagaaggagtactacgtggtggatgaggaggacaaacacctggatgtg
gtgctcagacgcagaggctacctcggggagacgtctttcattggcatcggcacccaggat
ggcagcgcaaagaagaacgaggacttcaaagggaagttgcagaagcaggtgcagttcaac
ccgggacagaccagagccacgtggcgggtgcggattctggcggatggaaaatacgagcag
gcggaaacctttcagattctgctgtcggagccggtgatgggagtgatggagttccctgtt
gtggcaacagtggaaatcctggatcctaaggatgagtccagcgtattcttccctgaacaa
atccactcggtggaggaagacgtcggagagttattcctcccggtgcaccgcagtggagac
gtcagcgaggagctcatggtgatttgccacacacagcaaggttctgccacagggaccatc
cccaccactgttctgtcctactccgactacatctcgcgtccagaggagcacagcagccta
attcggtttgacaggggcgagagggagaagctgtgccgcgtcgtgatcatcgacgactct
ctgtatgaaggagaagagagttttaacgtgactctgtccgtgcctgtcggggggcgtctg
ggaaaacactacacaacgactaaagtcaacatcgtcgaagatttggatgatgctccggtg
ttttacttcggagaggcagagtattatgcagacgaaagtgatggatacgtggaggtcaaa
gtgtggaggacgggaactgatctgtccaagtcgggtactgtgacggtccactctcgcaaa
acagagcctgcgtctgcagaagctggtacagactatgtgggaattagtcacaacttagac
tttgccccgggtgtcagcatgcagacgttcagggtgttcattctggacgaccttggacag
ccagagctggaggggactgagagcttcgagttggtcctgcgactgccagtcaatggtatc
ctgggagaacctggaaaggcaacagtcttcatcaatgactcagtgtcagacttgccaaag
gtccagttccgcaaacccctttacaccggagaggagagtgacggtctcatcacagcgatg
gtgtatcgcagcggagacatccgacacaagtcgtctgtgcgctgttacactcgtcagggc
tctgctcaggtcgcctccgactttgatgagcgccctaacacagacgcgtctgtcatcagt
ttcttaccaggtgaagtggagaaaccgtgtgttctgacgctggtggacgacacgctgtat
gaggaaggagaggagctgcggctggttttagggaccccgaggagcagctcacagtttggt
gcatcagtgggggctccgaatgagactctggtgaaaataaaagacacggcagacaaaccc
atcattcgatttctggaaaccaagttcagcataagtgaaccaaaggaagctggagctgtt
gctattgtgagggtccctgtggtacgaatgggtgacacatcaaaactgtccgtggttcgt
gttcacaccaaagatggatctgctgtgtcaggagtggattactaccccgtgtctcaagac
attgaattcagacaaggggataagcagcatgtcgtgcaggtggaggtgctgtttgatgga
gttcgggaaatgagggaagctttcactctgcatctgaagcctgacgacaacatggtggct
gaaacagagatgactaaagtaatagtgtacattgaggagtccaacagcatggcggatgtc
accttcccatcgttgcctcatgttgtgtcgttgcttcactacgacgatgtcgctcggacg
ccacacaacctgcagccaccagccggatacccggtcatctgtgtcacggcgtgcaacacc
aaatacccagactacgacaagacaggttctatctgtgtcagcgagcacatcaataacacc
ttgacccgctaccgctggctcatcagtgccccagctggtcccgatggcgtcaccagtccc
atgagggaggtggactttgacaccttctttacttcctccaagatgatcacactggactca
gtctacttccaggcgggctccagggtccagtgtgccgccagagctgttaattctgacggg
gatgaaggcttggagctcagcagccctgttgtcatcataagcaaggaggaaggcatgtgt
caaccacgcaagatgggaactgttggtgctgaacctttctctgccaaattgcgctacact
ggagcagacgacccgaaacaccccaacctcatcaaagtgactgtcactatgcctcacatc
gatggtatgcttcctgtaatctccactcggcctctggtgaactttgacctgactctcagt
cctgatggaacccgcgtcggaaaccaccgctgctccaacctgcttgatttcagcgaggtc
accacaggtcacggcttcatcaccgcttccactcggaatcctgagagcatgggagattcg
gcgccctatcagttcagcggtgctctgcgggggaacggcactctgcgtttttacaggaac
ctcaacctggaagcctgtctgtgggagttctccagctacttccacatgtctgagctgctc
actgactgtggcgggaccatcgggacagatggacaggttctgaatctggttcagtcctac
gtgaccctgcgtgtgcctctttacgtgtcatacgtgttccactccccggtgggaagcggc
ggctggcagcactttgatctgcagtcggagctgcgtctcacctttgtttacgacactgcc
attctctggaaagatggaattggcagtcccccacaagcagaactacagggttctttgttt
cccacaagcatgcgcatcaacaaacaggggcgtttggtggtaaacttccgcactagagct
catttcaggggtctgtttgtggagtctcattccccgggtcgaatcaaaagatcagtctcc
tctgtgtccatggtgatgagtgtagaccaccctggcttgacctttaacctcacactggtc
aggactgagcccacctacaaccagcccgtgcagcaatggatcttcatctccgactttgct
gtccgagactattctgggacgtacacagtaaagctgatcccgtgtacaacagcccagaat
attgagtattctgtcccacccatctgcagtcccagagaacccgtctcctttgacctcaac
atcaggttccagcaggtgagtgacccagtcgcagtggagttcagtctgaacactcagatg
ttccttctgtctaagaggagcctgtggctttctgatggatccaccagtttaggtcaagag
agtgatgtagccttttctgaaggtgatacgatatacggtcgtgtcatggtggatcctgtg
cagaatctgggagactctttcttctgcagcatagagaaggtgttcctgtgcaccggcgcc
gatggatatgtgccaaagtataacccaaccaattttgagtttggatgcctggctgactcc
ccatcactgctttataggtttaagatccttgacaaggctcagccagaaactcaggctctt
gtgtttggggaaatcggttttaacgctgtgctggcggtggacgatccatcagctctgtct
cttgtcagacaacccggttctgatgggtttagattggattctaccgccatgttccaggtt
gcagcggggcgtgagtggtacatacacgccatttataccgttcgctccaaagacgcgatc
ggcagaggcatcgggaagcggagcctggagtaccactcatttgtttctgcaaccgataac
cgggctttgtcctccaggccagaaactcctcgcaaaagaaggtcggctggagatgctgtc
cctgcagtcgctgaagatatcggcatagacaatagccggggcaccaacatcatgcacatc
tttttggaccgtaccaagaggaaatccaggctgtcagacgaactctttgccggtgggtta
gaacctgacgagctgaacgcggatgatacagaggagggtctgctgactgtggtgggggct
ctggtcggggtgctgctgactgtcctcatcattgtcgtcatcgcactcatagtcagatcc
aaacagaaggattggaaggaagcgggaaggggaggcgtccaagaggtggtgaaagggtct
atcagcacggagcccatgcttgtggtgaggatgcaggactgccatgacagctcagaggtc
tga
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integrated database retrieval system
