Oryzias melastigma (Indian medaka): 112138990
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Entry
112138990 CDS
T07439
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112138990 (robo4)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
ROBO family
112138990 (robo4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
DUF7359
DUF6519
Motif
Other DBs
NCBI-GeneID:
112138990
NCBI-ProteinID:
XP_024117451
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Position
LG14:complement(7411377..7437799)
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AA seq
1115 aa
AA seq
DB search
MRVTAWFLLVYWLFAYTELSQQCRLHHICPKEAELDRRSATRVKEQTHHGSGHQHKSHRS
RQQHRRVSFSGLRVHGEDIPPLIVHQPSDVVVKAGNPATLSCRADGSPKPTIQWLRNAQP
LRTREGDGQLQPMVLSDGNLFFLSVGGARRGSSHEGVYSCVASNSAGKAVSRNASLHIAA
LQDEFSEQPKDVEVAEGELAVLNCVPPVGHPAPNVMWKKDGIPINITDHRYIELSGKLII
ASVEKNHSGAYVCVATNIMGMRESRAARLSVLAKPVLTLKPENASVMAGDSAHFYCQATG
DPPPAVVWSREGGALPNGRYLVKPDHTLQLFYITAQDAGKYTCTAANDAGKVTASAHLLV
EVSANTEQRDFHKELSALRVTLENVTVVASGSNISLVQWEPQNVPSQPHYLDGFEVLYRS
VLPSSSDWAAKKVTMPKFQTQVGPLKRGYKYEFKVRPYGSNLYGRESNTQDLRVPEIVPS
APPSVVSMTVNHDQNNTIRLSWEPPPPETHNGIIQGYQVWCVESQEQQYQNWTVDSSQIS
LNVSNLKAGGQYWIIMAAVNGAGVGTLSDPQEFVINPKTRSLSESDKQSRDLVHLMDLLH
NPVVIGFLSAFLCCTLVVAAVFLFRRHSKTGKLLPGPGKMKGGCRLANEDLIIKHRMAAP
DSPWISGSWRPAFKHKYQDLWAQGQKQPGIKSTSLPDSSKRSNSRDCTVPMVTDRCGVYG
TFYVDLTGSSLKTFNSPGRSPKMPHGLPLQQGQESIQIFPQSPSNSSSASSRESLPWKQA
IRPQPRMGVLRECWEKKPNKQELHAVNSVPVLPSRSQACVYKQRLSHTPGPDCCKAAGGS
RLLHCSASLHFLDMLPPPPVEDKHSLSSDEGFSHSTKLTEDAGSVRSVCPASGPYQPAGP
TSSCPSLSPRSAASRSMSLDDDGTLTSQEATVYLELSPKPERRSVLPEQRPSLSQYHSSA
LGSICGPVCSSLLEESATDQLEFLPAALRHARLQSSPSSCYSEWDSSLWNTWSSVMDSNL
DSARTSLISSVDSCYTTDSATFAHMLAMAAESRSGASLTDLSPPASPLSALYPSQCGDSD
SFGEPVPVWDWSVAWMEEMEAQYRALYPARFPSET
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttactgcttggtttcttctggtgtactggctttttgcgtacactgaactctca
cagcagtgccggctgcaccacatctgtcctaaagaggctgaactggacaggaggtcagcg
acccgggtcaaggagcagactcaccacggttcaggacaccagcacaaatctcacaggagc
aggcaacaacatcggagagtttctttttcaggcctcagggttcacggggaggacatcccc
cccctcatagtccaccagccctctgatgtcgtggtgaaagctggcaatcccgccacgctc
tcctgccgtgcagacggcagcccaaagcccaccatccagtggctacgcaacgctcagccc
ctcagaaccagagagggagacggccagctgcaacccatggttctgtcagacgggaacctt
ttctttttgagtgtgggaggggccaggcgtggatcatcacacgagggcgtgtattcctgc
gttgccagtaacagtgctgggaaggctgtcagccgcaatgcatcactgcacattgctgcg
ttacaggacgagttcagtgaacaacctaaagatgtggaggtggcagagggcgagcttgct
gttctaaactgtgtccccccagtgggacatccagctcctaacgtcatgtggaagaaggat
ggcatacccatcaacatcacagaccatcgctacattgagctcagtgggaagctgattata
gcctcagtagagaagaaccactctggtgcctatgtgtgtgtggccacaaacatcatgggg
atgagagagagcagggcggctcggctgtctgtgctggcaaagccagtgttgacactgaaa
ccagaaaatgcctctgtcatggcgggagactccgcccacttctactgtcaagcaacaggt
gatcctcctcctgcagtggtctggagcagagaggggggggctctgcccaatggcaggtat
cttgtgaaaccagaccacaccctccagctcttttatatcacagctcaagacgcaggaaag
tacacgtgcactgcagccaacgatgctggcaaggtcactgccagcgcacatcttctagtt
gaagtgtctgcgaacactgagcaaagagacttccacaaagagctgtcagctctgcgggtg
actctggaaaacgtcaccgtcgtggcctcagggtccaacatatctttagttcaatgggag
ccccagaacgtcccatcccagccacactaccttgacggctttgaggtcctctaccgctct
gttctcccttccagctcagactgggcagctaaaaaggtcaccatgcccaaattccagact
caagtaggccccttgaagagaggatataagtatgagtttaaagttcgcccctacggaagc
aacttgtacggaagagaaagcaacacacaagacctcagagtcccagagatcgtacccagt
gcacccccgtcggttgtgtccatgacggtgaaccatgaccagaacaacaccatcaggttg
agctgggagcctccacctcctgaaacccacaatgggatcatacagggataccaggtgtgg
tgtgtggagtctcaagaacagcaatatcaaaactggacggtggacagcagccagatcagc
ctcaatgtctccaatctgaaagcaggaggacagtactggatcatcatggcagccgtcaat
ggagctggagtgggcacgctcagtgaccctcaggagtttgtgatcaacccaaagacacgc
agcctcagcgagtcagacaagcaaagccgagacctggtccatctcatggatctgcttcac
aatcctgtggtgattggtttcctcagcgccttcctgtgctgcacccttgtggtcgcagcc
gtcttccttttcagacgccacagcaagaccggcaagctgttacctggaccaggcaaaatg
aagggtggttgcagactggccaatgaagatctcatcatcaaacacaggatggcagctcca
gattctccatggatatctggaagctggagacctgccttcaagcacaagtatcaggattta
tgggctcagggtcagaaacagcctggaatcaagagcaccagtctcccggactcatccaag
cgcagcaacagccgggactgcactgttcccatggtgacagaccgctgtggcgtctacggg
accttttacgttgacctcacaggcagcagtctcaagaccttcaacagtccgggacgttct
cctaaaatgcctcacggtctgcctctccaacaaggacaggaaagcattcagatattccct
cagtctccctccaactcctcatctgccagcagtcgggagtctctgccgtggaaacaggcc
atccgccctcagccgaggatgggagtgctgagggagtgctgggagaagaagcccaacaag
caagagttacatgcagtcaatagtgttcctgtgctaccatccagaagtcaggcgtgtgtc
tacaagcaacgcctcagccacacaccggggcccgactgctgtaaagctgctggcggctct
cgtctgctgcattgttctgcatcgctgcacttcctggacatgctgccccctccacccgtg
gaggacaaacacagcctctcttcagatgaaggtttcagtcattccactaagctgacagaa
gatgcaggctccgtccggtccgtatgtcctgcatcaggcccttaccagccagcaggaccg
accagcagctgcccctccctcagcccccggtcagctgcttcccgctccatgtcgctggac
gatgacggtactctgacttcccaggaggccacagtgtatctagaactcagtcccaaacca
gaaagacggagtgtcctcccagagcagcgcccctccctgtctcagtaccattcctccgcc
ctgggcagcatctgtgggccggtctgttcctctctgctggaggagagcgccaccgaccag
ctggagttcttacccgccgctctgcgtcacgcccgccttcagagctcaccgtcgtcctgc
tacagcgaatgggacagctccctgtggaacacctggagctccgtcatggacagcaacctg
gacagcgcccgcaccagcctcatcagctcagtggacagctgctacaccacggacagcgcc
accttcgcccacatgctggccatggcggccgagagcaggagtggagcttccctgacagac
ctctccccaccggcctcccccctcagtgccttgtacccatcgcagtgtggcgacagcgac
tccttcggggagcctgtcccggtgtgggactggagcgtagcctggatggaggaaatggag
gcccagtacagagccctgtatcctgccaggttcccctctgagacctag
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