Oryzias melastigma (Indian medaka): 112139024
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Entry
112139024 CDS
T07439
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112139024 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112139024 (chrne)
Ion channels [BR:
oml04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112139024 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112139024
NCBI-ProteinID:
XP_024117488
Ensembl:
ENSOMEG00000003066
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Position
LG14:12360950..12371326
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AA seq
518 aa
AA seq
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MMAVCHFWIYSGVLTLLWLSAGPVHCNEESQLISDLFMNYHKNSRPVVNPDDKVEVTIKL
TLTNLISLNEKEETLTTNVWIEIQWTDYRLSWNESKYYGIDVIRVPYNTVWLPDIVLENN
IDGKFDVAYYANVLISSNGGMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSAKE
VDLVLANSEDGSTIEWVDIDPEAFTENGEWAIVHRPARKMIDTRYSPDDLEYQEIMFNLV
IQRKPLFYIINVILPCSLISLLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKTP
ETSLAVPLIGKYLIFVMCVTTLIATNQIVVLNFSLRSPSTHTMSYSIKHLCLEMVPRFLG
MSPLVDDSEVTAEVNGIRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSMVD
NIDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTKQQNDIGSEIESWVLIGKMIDKVCF
WAAILLFIVGTVGIFLTGHVNKAPEFPFPGESKKYAPV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtatgtcacttttggatatattctggagttttaacactactctggctttct
gcgggcccggtgcactgtaatgaagagtcccagctgatcagtgacttgttcatgaactac
cataagaatagtcgcccagtggtgaatcctgatgacaaggtggaggttacgatcaagctg
acacttaccaatcttatctccctgaacgagaaggaggaaactcttacaaccaatgtgtgg
attgagattcagtggaccgattatcggctttcctggaatgagtctaagtattatggcatc
gatgtcatccgggtcccatacaacactgtctggctccctgacatagtcttggaaaacaac
attgatggcaaatttgatgtggcttactacgccaatgtgctgatcagcagcaatggcggg
atgtactggctccctccggctatttatcgcagcacttgtgcaattgagatcacctacttc
ccatttgattatcaaaactgcacgcttgcattcaggtcccaaacgtatagcgccaaagaa
gtggacctagttctggccaatagtgaagacggttctactattgagtgggtggacattgat
cccgaagcttttacagagaatggagagtgggccattgtccatcgtccagccaggaagatg
atcgacactcgatattccccggatgacctggagtatcaggaaataatgttcaatctggtc
attcaaagaaagcccctgttctacatcattaacgtcatcctaccatgctccctcatctcc
ttgttggttgtactggcctactttctgcctgcacaagctggaggacagaagctgactgtg
tccatctctgtcttgctggctcagactgtcttcctcttcctcattgctcagaagacccct
gagacatctctcgctgtccctcttattggaaagtacctgatttttgtcatgtgtgtcacc
actcttattgcaacaaaccaaattgtggtgctgaacttctcattgcgcagtcctagtaca
cacacaatgtcctactccatcaagcatctgtgcttagaaatggttcctcgcttcctgggc
atgtctcctctggtggatgacagtgaggtgactgcagaggtaaacggcataagagagcgc
cgccgaagctcctttggtctcatgcagagagcagaggaatatgtgctaaagcaaccacgc
agtgaaatgatgttcgacaagcaaagagagaggcatggtctgacgcgctcaatggtggac
aacatcgatgtcagcagcacagccaacctttacaagagtttggctcaagctgcaccagaa
ataaagcaatgtgtagacgcctgtaacttcattgcagagagcacaaagcaacaaaatgac
ataggatctgaaattgaaagctgggtattgattggaaagatgattgacaaggtctgtttc
tgggctgctattctcctcttcatcgttgggactgtggggatcttcttaactggacacgtc
aacaaagcgccagaatttccatttcctggggagagtaagaagtatgccccagtttaa
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