Oryzias melastigma (Indian medaka): 112139039
Help
Entry
112139039 CDS
T07439
Symbol
arhgef4
Name
(RefSeq) rho guanine nucleotide exchange factor 4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112139039 (arhgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112139039 (arhgef4)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112139039 (arhgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
TetR_C_42
Motif
Other DBs
NCBI-GeneID:
112139039
NCBI-ProteinID:
XP_024117501
Ensembl:
ENSOMEG00000009990
LinkDB
All DBs
Position
LG20:complement(24089739..24123788)
Genome browser
AA seq
632 aa
AA seq
DB search
MRTQQGSEGGVPLPGGSCGSSGSSGLSPGSDSDRESWRGGGGGCMGGGGCGSLGGTLRGV
LSRYWSLESLHSTTALVLPDGASEKAADELGSEDDLYEDFRSSGHRFGHPGGGGGEQLAI
NELISDGSVVFAEALWDHVTMDVQELGFKAGDVIEVVDASNKEWWWGRIMDSEGWFPASF
VRLRVNQDEPMEEYLAQLGEIQALNEGQASLASLSGPGLPCKEQMRTNVINEIMNTEQDY
IKHIKDICEGYVKQCRKRTDMFTEEQLRTIFGNIEDIYRFQRKFLKTLEKKFNKEQPHLS
EIGCCFLEYQTDFQIYSEYCNNHPNACVQLSKLMKVNKYVFFFEACRLLQRMIDISLDGF
LLTPVQKICKYPLQLAELLKYTNPQHRDYKDVDAALNAMKNVARLINERKRRLENIEKIA
RWQSSIEDWEGEDVLSRSSELIFSGEVTKLSQPQNKSQQRMFFLFDHQMIYCKKDLLRRD
MLYYKGRLDMDHMEVIDLEDGREKDFNISVKNALKLRSLNTEEIHILCTKKPEQKARWLR
AFSDERRQVLHDRETGFSLTDLQKKQAMLNACKSHPAGKPKAVTRPYCDFLLRQKHPSLP
TALPQQQVFMLAEPKRKTTFWHNIGRLTPFKK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcggacccagcagggctcggaggggggcgtgccgctgcccgggggcagctgcggcagc
tccggcagctccgggctgtctccgggctccgactcggacagagagagctggaggggggga
ggaggtggatgcatgggtggaggtggatgtggcagtttgggcggcactttgaggggcgtc
ctgtcacggtactggagcttggagagtctgcactccaccacagctctagtgcttcctgat
ggagcttcagaaaaagccgctgacgagctgggcagtgaagatgatctctacgaagacttc
cgaagttctggacatcggtttggacatccaggaggaggtggaggggaacagctagccatt
aatgagctgatcagtgatggcagcgtggtcttcgccgaggctctgtgggaccacgtcacc
atggacgtgcaggagctgggcttcaaagccggtgatgtcatagaggtggttgatgcaagc
aacaaggagtggtggtggggtcgcatcatggacagtgaaggctggtttcctgccagcttt
gttcggctgcgtgtaaaccaggatgaaccgatggaagagtatctggcacaactaggggag
attcaggctctgaatgagggccaagccagtctggcttctctatcaggacctggtctaccc
tgcaaagaacagatgagaaccaatgtcatcaatgagatcatgaacacagagcaagactac
atcaagcatataaaggacatatgtgagggttatgtcaaacagtgccgtaagaggacagac
atgttcactgaagagcagctgcgcacaatctttggcaacattgaagacatataccgattc
cagaggaagttcctgaagaccttggagaagaagttcaacaaggagcagccccatctcagc
gagattggctgctgcttcttagaatatcaaacagatttccagatttattccgagtattgc
aacaaccatcccaacgcctgcgtgcagctctccaaactgatgaaggtcaacaagtacgtg
ttcttctttgaagcctgccggctgctgcagaggatgatcgacatttctttggatggcttc
ctgctcactccagttcagaagatctgcaagtatcctctgcagctggctgaactgctcaaa
tacaccaaccctcagcacagggactacaaagatgttgatgctgccctcaatgccatgaaa
aatgttgccaggcttattaatgagaggaaacggcgccttgaaaatattgagaagatagcc
cgctggcagagctccatagaggactgggagggtgaagatgttctcagcagaagctctgaa
ctcatcttttctggggaggtaaccaagctatcccagcctcagaacaagagtcaacagaga
atgtttttcctctttgatcatcagatgatttactgcaaaaaggatctcctgcgccgggac
atgctgtactacaaaggccggctggatatggaccacatggaagtgatagacctggaggac
ggcagagagaaagatttcaacataagtgtaaaaaacgccctgaagctgcgatctctaaat
actgaagaaatccacattttgtgtaccaagaaacctgagcagaaagcgcgctggctcaga
gctttcagtgatgagaggcggcaggtccttcatgaccgcgagacaggcttttctctgact
gacctgcagaagaaacaggccatgctaaatgcctgtaaaagccatccagctgggaaacct
aaagcggtgaccagaccctactgtgacttcctgctccggcagaaacacccgtccctgccc
accgctttgccgcagcagcaggtcttcatgctggccgagcccaagcgcaagaccaccttc
tggcacaacatcggcaggctgacacctttcaagaagtga
DBGET
integrated database retrieval system
