Oryzias melastigma (Indian medaka): 112139055
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Entry
112139055 CDS
T07439
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112139055
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112139055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
PQQ_2
RRM_Nup35
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
112139055
NCBI-ProteinID:
XP_024117523
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All DBs
Position
LG20:complement(24909795..24937715)
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AA seq
515 aa
AA seq
DB search
MDSVGDIAVGMKRGSDELSMYNNPNSDMSTRRDGTSNGSDSKKLRVEEALPSRVIHIRRL
PTEAMDAEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMVNYYNTVPPHVRNSPV
YVQFSNHKELKTDAASQRTQAVLQAVSAVQSPSSEVQEVLAAASSPVLRIIIDNMFYPVT
LDVLQQIFSKFGTVMKIITFTKNNQFQALLQYSDSVHAQHAKLALDGQNIYNSCCTLRID
FSKLVNLNVKYNNDKSRDYTRPELPAGDGQPTLDPNVAAALSKDSTSLLGKIPGALNPLS
AAAAAAAAAGRVALAGQAGSGGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKD
SALIQMSDSNQAQLAMSHLNGQKMYGKIIRVTLSKHQSVALPRDGLDDQGLTKDFTNSSL
HRFKKPGSKNFQNIFPPSATLHLSNVPQDVAEEDLRLLFSNTGGTVKAFKFFQDRKMALI
QMATVEEAIQGLIDLHNYHMGANQHLRVSFSKSTI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgttggagatatagcagttggaatgaaaagaggatctgatgagctgagtatg
tacaacaatcccaactctgacatgagcactaggcgtgacggaacgtccaatggcagtgac
agtaagaagctcagggtggaggaggctctgccgtctcgtgtgattcacatcaggaggctt
cccactgaggcaatggacgcagaagtcatagctcttggtctaccttttggcaaagtaaca
aacatcctgacattgaaggggaagaaccaggccttcctggagatgggaacggaggaggcg
gccatcacaatggtgaactattacaacacggtccctccacacgtccgcaactcccccgtc
tacgttcagttctccaaccacaaagagctcaaaactgatgctgccagtcagcggactcag
gcggtgctgcaggcggtctcagcagtccagtccccgagctcggaggtgcaggaggttcta
gctgcagcgtccagccctgtactgcggattatcatcgacaacatgttctaccccgtcacg
ctggacgtgctgcagcagatattttcaaagtttggcacagtcatgaagattatcaccttc
accaagaacaatcagttccaggctcttctgcagtacagtgattctgtccatgcgcagcac
gctaaactagcactggatggtcagaatatttacaattcctgctgcacactgcgcattgac
ttctcgaagctggtcaacctgaatgttaaatacaacaatgataagagtcgtgactacacc
agacctgagctgccagcaggtgacggtcagcccactctggaccccaatgtggctgctgct
ctcagcaaagactccacctccctcctcggtaagatcccaggagccttgaaccctttgagt
gcggcggcggcagctgctgctgcagcgggtagggttgccctcgccggacaagcgggatcc
ggcggggtcctgctggtgagcaacctcaacgaggagatggttacgccccaaagtctgttt
accctcttcggagtgtacggggatgtccagagggtgaaaatcctctacaacaagaaggac
agtgctctgatccagatgtcagattctaatcaggcccagcttgcaatgagccacctgaac
ggacagaagatgtatggaaagataatccgagtcactttgtccaagcaccagtcagtggct
ctgcctcgtgacggcctggacgaccagggcctgaccaaggacttcaccaactcctccctt
catcgcttcaagaaacctggctctaagaacttccagaacattttcccgccctcggccact
cttcatctgtccaatgtcccacaggacgtggctgaggaagacctgcggctgctgttttcc
aacacggggggaaccgtcaaagccttcaagtttttccaggatcggaagatggctctgata
cagatggcaacggtggaggaagccattcagggcttgatcgaccttcataactaccacatg
ggagccaaccagcacctcagagtgtccttctccaagtccaccatttga
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integrated database retrieval system
