Oryzias melastigma (Indian medaka): 112139080
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Entry
112139080 CDS
T07439
Name
(RefSeq) oligoribonuclease, mitochondrial
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112139080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112139080
03009 Ribosome biogenesis [BR:
oml03009
]
112139080
Messenger RNA biogenesis [BR:
oml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
112139080
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
RNases
112139080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
112139080
NCBI-ProteinID:
XP_024117544
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MTACWRGSSRFVFAFLWSGGFRRVSTAPLARGHSRRIRVPLRNQFKQEVCPRHAGLSLVS
RLSFVSGRVVMSSSEMSQRMVWVDLEMTGLDIEKDQIIEMACIITDSDLNILAEGPNLII
NQPDQLLDEMSDWCKEHHGKSGLTQAVRESKISLQQAEYEFLSFIRQHTPPGQCPIAGNS
VHADKKFLEKYMPQLMHHFHYRIIDVSTIKELCRRWFPEEYKLVPYKKASHRALDDIQES
IKELKFYRDNIFKAATQERDCTLLENGDDKKP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtgttggcgcggttcatcacgttttgtcttcgcttttctttggtctggaggc
tttagaagggtttccactgctccgctcgcacgcgggcattcacgtcgcatcagagtcccc
ctccgtaaccagtttaaacaggaagtttgtccgcggcacgcgggcttgagtttggtctcc
aggttaagttttgtttctggcagagtcgtcatgtcgtcctcggagatgtcccaaagaatg
gtgtgggttgacctggagatgactggacttgatattgaaaaggaccaaatcattgaaatg
gcgtgcatcatcacagactctgacctgaacattttggctgaggggcccaacctgatcatt
aaccaacccgatcaactgctggacgagatgtcagattggtgcaaagagcatcatgggaag
tcagggctgacccaggctgtgcgagagagtaaaatctcccttcaacaagcagaatacgag
ttcctgtccttcatccggcagcacaccccacccggacagtgtcccattgctggtaactct
gtgcatgcagacaagaagttcctggagaagtacatgcctcagttaatgcaccactttcac
tacagaataattgatgtgagcaccatcaaggagctctgcagacggtggtttccagaagaa
tacaaactggtgccttataagaaagcctcccacagagctttagacgacatccaggagagc
attaaggagctcaagttctacagagacaacatctttaaggctgcaacccaggagagagac
tgcacattacttgaaaatggagacgacaagaagccctaa
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